Cow genome map

Conread name: Ss1.1-raor029_h22.5

Conread position: 1-467
Cow position:
Alignm length: 479
Alignm identity: 302
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 42

Conread position: 1-498
Cow position:
Alignm length: 510
Alignm identity: 313
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 272

Conread position: 1-513
Cow position:
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 103

Conread position: 1-514
Cow position:
Alignm length: 523
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-514
Cow position:
Alignm length: 525
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 267

Conread position: 1-524
Cow position:
Alignm length: 535
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 106

Conread position: 1-524
Cow position:
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 122

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 438

Conread position: 1-526
Cow position:
Alignm length: 536
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 110

Conread position: 1-526
Cow position:
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-527
Cow position:
Alignm length: 536
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-528
Cow position:
Alignm length: 539
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 285

Conread position: 3-454
Cow position:
Alignm length: 461
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 3-476
Cow position:
Alignm length: 485
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 349

Conread position: 3-479
Cow position:
Alignm length: 486
Alignm identity: 305
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 3-497
Cow position:
Alignm length: 507
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 3-513
Cow position:
Alignm length: 521
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 100

Conread position: 3-513
Cow position:
Alignm length: 522
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 103

Conread position: 3-515
Cow position:
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 103

Conread position: 3-515
Cow position:
Alignm length: 523
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 104

Conread position: 3-523
Cow position:
Alignm length: 534
Alignm identity: 331
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 69, 103

Conread position: 3-525
Cow position:
Alignm length: 532
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-528
Cow position:
Alignm length: 538
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 110

Conread position: 4-528
Cow position:
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 103

Conread position: 42-525
Cow position:
Alignm length: 494
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 224

Conread position: 42-528
Cow position:
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 48-528
Cow position:
Alignm length: 484
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 49

Conread position: 66-500
Cow position:
Alignm length: 437
Alignm identity: 272
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 351, 9

Conread position: 73-471
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 73-504
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 73-512
Cow position:
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 73-513
Cow position:
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-524
Cow position:
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-524
Cow position:
Alignm length: 457
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 104

Conread position: 73-525
Cow position:
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-528
Cow position:
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-404
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 23

Conread position: 74-515
Cow position:
Alignm length: 447
Alignm identity: 290
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 23

Conread position: 74-519
Cow position:
Alignm length: 450
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 74-524
Cow position:
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 74-524
Cow position:
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 25

Conread position: 74-528
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 206

Conread position: 75-523
Cow position:
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 76-514
Cow position:
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 36

Conread position: 76-524
Cow position:
Alignm length: 451
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 82-515
Cow position:
Alignm length: 436
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 92-524
Cow position:
Alignm length: 435
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 338

Conread position: 114-525
Cow position:
Alignm length: 412
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 116-525
Cow position:
Alignm length: 414
Alignm identity: 256
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 136, 92

Conread position: 141-524
Cow position:
Alignm length: 385
Alignm identity: 243
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 159-492
Cow position:
Alignm length: 335
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 266, 284

Conread position: 212-505
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 246-511
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 32

Conread position: 317-525
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 327-528
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.