Cow genome map

Conread name: Ss1.1-raor029_h22.5

Conread position: 1-487
Cow position:
Alignm length: 497
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 106

Conread position: 1-513
Cow position:
Alignm length: 524
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 105

Conread position: 1-516
Cow position:
Alignm length: 526
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 205

Conread position: 1-524
Cow position:
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 107

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 126

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 100

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 1-525
Cow position:
Alignm length: 535
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 21

Conread position: 1-525
Cow position:
Alignm length: 527
Alignm identity: 330
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 108, 95

Conread position: 1-528
Cow position:
Alignm length: 538
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 1-528
Cow position:
Alignm length: 538
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 294

Conread position: 1-528
Cow position:
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-528
Cow position:
Alignm length: 539
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 271

Conread position: 1-528
Cow position:
Alignm length: 539
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 1-528
Cow position:
Alignm length: 538
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 271

Conread position: 3-513
Cow position:
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-515
Cow position:
Alignm length: 523
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 277

Conread position: 3-528
Cow position:
Alignm length: 538
Alignm identity: 345
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 78, 197

Conread position: 41-513
Cow position:
Alignm length: 478
Alignm identity: 301
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 59

Conread position: 42-492
Cow position:
Alignm length: 460
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 42-513
Cow position:
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 42-516
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 50

Conread position: 73-322
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 30

Conread position: 73-487
Cow position:
Alignm length: 417
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 73-507
Cow position:
Alignm length: 437
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 73-512
Cow position:
Alignm length: 444
Alignm identity: 263
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 38

Conread position: 73-528
Cow position:
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 23

Conread position: 73-528
Cow position:
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 184

Conread position: 74-404
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 74-406
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 74-514
Cow position:
Alignm length: 443
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 76-528
Cow position:
Alignm length: 455
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 78-519
Cow position:
Alignm length: 446
Alignm identity: 269
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 45

Conread position: 112-524
Cow position:
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 115-499
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 76

Conread position: 117-502
Cow position:
Alignm length: 388
Alignm identity: 233
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 54

Conread position: 129-518
Cow position:
Alignm length: 395
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 156, 136

Conread position: 130-528
Cow position:
Alignm length: 401
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 134-511
Cow position:
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 141

Conread position: 135-427
Cow position:
Alignm length: 297
Alignm identity: 188
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 47

Conread position: 153-513
Cow position:
Alignm length: 364
Alignm identity: 220
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 113

Conread position: 195-526
Cow position:
Alignm length: 334
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 28

Conread position: 196-528
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 222-522
Cow position:
Alignm length: 301
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 254-524
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 15

Conread position: 336-524
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 66

Show alignments to all cow chromosomes.