Cow genome map
| Conread name: | Ss1.1-raor032_g12.5 |
| Conread position: | 1-188 |
| Cow position: | chr11:1429135-1428948 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 183-425 |
| Cow position: | chr11:1427893-1427651 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 414-541 |
| Cow position: | chr11:1427114-1426987 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-765 |
| Cow position: | chr11:1426238-1426016 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 764-921 |
| Cow position: | chr11:1425912-1425755 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 135 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 913-1026 |
| Cow position: | chr11:1425526-1425413 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1023-1482 |
| Cow position: | chr11:1425094-1424636 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 245 |
| Conread position: | 1562-1930 |
| Cow position: | chr11:1424494-1424136 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 97 |
| Conread position: | 1951-2190 |
| Cow position: | chr11:1424135-1423899 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 109 |
| Conread position: | 2260-3024 |
| Cow position: | chr11:1423789-1423033 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 648 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 25 |
| Conread position: | 2570-3708 |
| Cow position: | chr11:1507762-1508897 (view UCSC Genome Browser custom track) |
| Alignm length: | 1148 |
| Alignm identity: | 1024 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 3016-3184 |
| Cow position: | chr11:1422708-1422540 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3186-3323 |
| Cow position: | chr11:1421342-1421205 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3323-3488 |
| Cow position: | chr11:1420370-1420205 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3566-3705 |
| Cow position: | chr11:1419908-1419769 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.