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Cow genome map

           
Conread name:
           
Ss1.1-raor037_p12.5
        

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:728583-728675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:1409464-1409556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:2479948-2479855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:12485088-12484996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:16681316-16681408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:21656259-21656167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:33860556-33860648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr16:49097176-49097268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-94
               

               
Cow position:
               
chr16:20888447-20888354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr16:27138486-27138363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr16:45107360-45107483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr16:27706538-27706407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 92
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr16:28159363-28159494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr16:32920937-32921067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr16:49253057-49252925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr16:54083387-54083523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr16:831898-831760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr16:12472558-12472424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr16:32970388-32970246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr16:17288471-17288620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr16:53272386-53272532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr16:3012326-3012473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr16:14661911-14661761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr16:7549443-7549583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr16:14629647-14629496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr16:54179245-54179091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr16:8620930-8621083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr16:22124488-22124332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr16:27842776-27842621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:825682-825838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:4722690-4722848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:11286836-11286994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:15312500-15312658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:17400063-17400220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:18235193-18235036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:27592429-27592271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:28402917-28403072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:30663191-30663030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:32522894-32523050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:33198785-33198626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:34998924-34998762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:44097962-44097804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr16:46765468-46765310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:10368254-10368094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr16:41896031-41896185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr16:19350571-19350411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:13191693-13191534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:41110109-41109946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:42073280-42073117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:46555634-46555797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:41712-41878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:8796549-8796381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:27013584-27013748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:30027548-30027714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr16:46453083-46452913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:8462353-8462186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:7385977-7386148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:10866965-10867136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:11275554-11275383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:12283780-12283952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:21156491-21156662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:24408125-24408296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:25183431-25183260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:25329085-25328911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:25614533-25614704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:26389690-26389861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:31822180-31822009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:33926001-33925830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:35342287-35342116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:35443336-35443165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:37387477-37387306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:43819865-43819694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr16:52255004-52254833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr16:49779738-49779562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr16:22340769-22340942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr16:37394534-37394711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 164
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:5350296-5350116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:1435523-1435707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:18979211-18979388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr16:6389198-6389015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr16:23363817-23363635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr16:33177329-33177511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:28143882-28144065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:49093894-49093711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:6712051-6712237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 46
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:56783290-56783477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr16:43769735-43769546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr16:47852935-47852753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr16:40878614-40878419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:33458331-33458128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr16:23730256-23730059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
195, 89
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr16:23475773-23475973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:31666281-31666076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:40333641-40333440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:52837451-52837248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:53769967-53769766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
178, 49
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr16:42848967-42848761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr16:10857946-10857738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr16:16141945-16141735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr16:18540943-18540733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:5524889-5524679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:14385623-14385832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 144
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:34210733-34210526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:45588691-45588477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:13177080-13177290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:43126486-43126284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 30
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:11100115-11099909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:15255268-15255067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:18051773-18051981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:26654866-26655073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
149, 90
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:37924482-37924279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:45173868-45173657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:48084024-48083813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:51481270-51481475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr16:56832060-56831849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:3177583-3177370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
204, 192
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:5395870-5395655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:7021993-7021778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:9014001-9013786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:9431855-9432070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:13883975-13884190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:14570651-14570866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:14679822-14680037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:15754729-15754514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:16942928-16943143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:17952630-17952845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:19082258-19082473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:20662817-20663040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:22912848-22913063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:23875653-23875439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
207, 139
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:24425341-24425556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:26627963-26628177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:26923003-26922791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
207, 64
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:28193089-28192874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:29106935-29106720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:37146877-37147092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:41152989-41153204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:41733908-41734123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:41837975-41837760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:42211708-42211923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:45647906-45647692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 34
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:51234774-51234562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
207, 51
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:51522449-51522664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:51939435-51939650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:52095406-52095621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:53736697-53736912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:55786363-55786148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:12249210-12248995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:15904009-15903794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:35285055-35284840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:39474458-39474246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 138
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr16:25170073-25170281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:54672922-54673134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
207, 81
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:48956486-48956692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
216, 40
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr16:12931252-12931028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr16:4399404-4399626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr16:47341804-47341579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr16:50418009-50417780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr16:30715172-30715399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
219, 207
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr16:31122574-31122342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 212
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr16:9736150-9735923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 162
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr16:30018881-30019109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 75
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr16:14722061-14721837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
216, 10
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr16:24988622-24988856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr16:25880527-25880761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr16:12644703-12644936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
167, 209
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr16:703009-703239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 95
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr16:11632632-11632394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 225
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr16:12919137-12918902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
198, 84
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr16:46745270-46745034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
180, 193
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr16:33777499-33777728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr16:41590468-41590690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 16
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr16:48370266-48370034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr16:15408192-15407964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr16:15495648-15495889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr16:16210234-16209994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 162
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr16:44138859-44138623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
207, 90
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr16:52835193-52834968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:712283-712042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:2790449-2790687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
164, 142
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:6800632-6800391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:9212238-9212479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:11130381-11130143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
191, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:13421714-13421473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:15348954-15348718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 159
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:15974151-15973910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:18937183-18936946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:20503231-20503471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
207, 195
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:22129989-22129755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 25
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:22157920-22157688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
216, 165
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:24752715-24752474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:26659176-26659422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:27538226-27538467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:28292559-28292799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 222
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:32905933-32906171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
207, 162
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:33102284-33102043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 223
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:33133268-33133508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
207, 144
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:39344076-39344312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 165
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:39429256-39429017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:40109253-40109491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 84
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:41034808-41035046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 40
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:41516289-41516530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:42219493-42219254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 162
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:43563534-43563775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
190, 159
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:44831205-44831446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:45683906-45684141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:47304580-47304819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
192, 196
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:51087992-51088226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
207, 170
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:53932288-53932050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
207, 69
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:55965732-55965973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:675182-675417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
211, 40
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:4857413-4857178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:6344230-6343994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:9811810-9811571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:15726681-15726450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
209, 84
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:22717283-22717520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:23823331-23823097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
206, 29
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:35757897-35758129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:41037367-41037612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
207, 40
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:45234019-45234259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:47242635-47242878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:49217881-49217640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:53427937-53428175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:53813977-53813736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 53
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:54578852-54579087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
218, 39
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:55782779-55782548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr16:9948466-9948713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:8481403-8481167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
188, 40
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr16:54228049-54227805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 157
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr16:56853634-56853880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
216, 83
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr16:19643575-19643818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
219, 122
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:11790681-11790947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 219
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:45139348-45139602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr16:39394257-39394508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr16:56875969-56875717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
218, 28
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr16:29655008-29655262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr16:24209188-24208929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr16:33645700-33645948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
219, 15
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr16:9846032-9845773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
213, 53
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr16:56445722-56445463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 112
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:16573313-16573570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
207, 40
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:41752902-41752635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 179
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:51598922-51598668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:18978399-18978660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:4103480-4103219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:4293395-4293657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 32
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:4525916-4525654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
164, 24
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:5726610-5726863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
219, 51
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:5845349-5845611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:6379429-6379167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:7010750-7011010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 165
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:8807410-8807150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
219, 149
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:9497593-9497335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 149
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:11621123-11620867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
219, 154
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:13698188-13698453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:15762483-15762218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:15808652-15808915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:15824758-15824504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
219, 80
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:15979165-15978900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:16265417-16265159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
219, 53
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:16424924-16424663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
211, 162
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:17142616-17142879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:18141646-18141388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
214, 40
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:18758159-18757899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:23066348-23066601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:23472423-23472688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:23871972-23871707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:24213339-24213074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:24215635-24215372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
207, 162
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:25936284-25936552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:27026928-27027191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
207, 165
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:29538471-29538205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
153, 224
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:30289996-30290260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 171
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:30939417-30939675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
219, 40
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:33299073-33299336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
215, 53
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:37445214-37444949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:43275702-43275962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 165
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:43537418-43537683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:43894052-43893776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
136, 152
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:44676571-44676813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:45609666-45609931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 203
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:48087190-48086927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
199, 90
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:48341009-48340756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
219, 52
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:49125840-49125588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
215, 84
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:51400066-51399805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:51500613-51500874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:53509308-53509042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
206, 84
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:55586923-55586659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:56813285-56813026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
225, 39
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:4502960-4503224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
205, 165
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:16096426-16096678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
219, 31
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:16236448-16236186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:55682973-55683241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
205, 180
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr16:29066848-29067113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 156
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:12159904-12159628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:13330255-13329982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 84
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:20734067-20733806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 133
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:24427183-24427450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 158
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:34809581-34809857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:38709139-38708879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
216, 48
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:50906149-50906424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
207, 115
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:590223-589964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
219, 40
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:600625-600904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:7541971-7542239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
207, 90
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:8840572-8840847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 173
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:18205641-18205913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 174
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:24228670-24228397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 165
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:28922469-28922738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
212, 84
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:31159890-31159619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:39385081-39385360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
162, 208
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:44973168-44973448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:47510294-47510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:50189908-50189637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:51113194-51112924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
217, 30
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:51710448-51710179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
219, 165
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:52855336-52855071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
219, 80
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:53554032-53553762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
264, 40
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:56149993-56150253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
219, 119
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr16:26610322-26610592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr16:7048091-7047809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
207, 184
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr16:43513247-43513532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 220
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:4972345-4972060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:6264041-6263754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:29158812-29159093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
206, 84
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:39033139-39032856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:42218013-42217722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 226
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:2425904-2425616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:2724013-2723720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:3147830-3147542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:3768558-3768272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:4428450-4428735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
226, 47
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:7467822-7468111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
91, 224
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:8652037-8652325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:8812893-8812597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
161, 231
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:10202724-10202447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
216, 162
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:10441451-10441739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:12534757-12534469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
225, 154
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:13068941-13068659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
206, 75
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:14351247-14350961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
207, 184
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:14611358-14611645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
216, 222
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:15188267-15188553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
205, 139
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:23248752-23248464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:23532789-23532501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:23986515-23986795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
207, 7
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:24240190-24239902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:25345185-25345472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 63
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:25454267-25453979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 224
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:27028010-27028297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 244
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:28205907-28205620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
207, 195
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:28467911-28467623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:29051344-29051637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 228
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:30311425-30311147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 31
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:46101411-46101122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 181
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:48520137-48520425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:49768537-49768249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:51641463-51641751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:54322197-54321909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:1257068-1257357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
181, 173
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:3338590-3338872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
207, 40
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:5108181-5107893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 58
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:5666308-5666594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 260
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:5867595-5867306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:5895636-5895924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
207, 46
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:6342525-6342236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:6677929-6678218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:7896192-7896481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:11218348-11218637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
172, 186
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:11916796-11916509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:14040637-14040922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
207, 100
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:15416829-15416541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
207, 225
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:15571072-15571359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:18211983-18211694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:19322152-19321863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:20277306-20277017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:20967383-20967097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
205, 84
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:21012238-21011949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
181, 173
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:23877687-23877976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:25075805-25076094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:26078277-26078566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:26132965-26132676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:26316361-26316072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:27064187-27063899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 144
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:28277957-28277671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
226, 25
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:31656506-31656795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:32118789-32119078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:39787791-39787502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 239
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:41576721-41577010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:42161714-42161426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:47248299-47248586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:52409902-52409614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
207, 124
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:56281587-56281298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr16:418309-418580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:7498749-7499028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
219, 84
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:9932835-9933126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 159
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:11775368-11775081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:23737865-23738146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:24825747-24826039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:25445088-25445381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:26500844-26501124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
221, 40
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:39588585-39588876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:17143485-17143779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
176, 168
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr16:37052853-37052555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:31978508-31978212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 167
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:35187934-35188229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr16:43804179-43804467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 52
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr16:7665307-7665612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr16:12652132-12652433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr16:38664028-38663733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 40
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr16:44228999-44228699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 283
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr16:55124386-55124086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 115
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr16:5436036-5436337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
207, 223
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr16:8448982-8448669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
145, 221
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr16:9790946-9790652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:13791185-13791496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:54298160-54298451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
219, 141
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:55308855-55308562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 163
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:3333105-3333397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:29823248-29822939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 185
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr16:28431586-28431289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:20234418-20234115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
179, 80
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr16:49169699-49169400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
229, 40
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr16:49230090-49229787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:4626714-4626409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
219, 85
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:2960891-2961200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 293
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:15424553-15424243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 294
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:16149483-16149173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
207, 249
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:18650372-18650063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 186
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:20677407-20677100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
207, 41
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:20761874-20762183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
207, 120
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:20865077-20865385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
207, 30
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:34518327-34518637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 291
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:42423258-42422948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
207, 239
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:49126503-49126200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 84
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:55656157-55656465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
207, 142
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr16:24147838-24148150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
221, 40
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr16:4144740-4145065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr16:39646240-39646544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
212, 84
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr16:54287555-54287865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:42970251-42969924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 168
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr16:21450534-21450852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
211, 40
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr16:45631710-45632045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:2947150-2946813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
207, 294
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:8647069-8647415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 338
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:10813094-10813431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 294
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:23094383-23094720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
179, 159
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:29523765-29524102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:40642775-40642438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 294
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:54431061-54430724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 294
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:34021640-34021241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
207, 294
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr16:14236948-14237372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
207, 224
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:28191750-28192171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
249, 41
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr16:25254676-25254825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr16:25965190-25965336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-164
               

               
Cow position:
               
chr16:56626663-56626822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr16:3288714-3288879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr16:23770239-23770070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr16:45731691-45731509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr16:15955012-15955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr16:56185776-56185570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
206, 131
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr16:5910962-5911170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:23038415-23038213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr16:52952031-52951817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr16:11425457-11425230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
211, 14
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr16:40305612-40305848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 223
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr16:5963037-5962795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 167
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr16:42379235-42379475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr16:52538687-52538929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
186, 224
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr16:13989667-13989899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
220, 99
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr16:50712226-50711986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
206, 220
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr16:3918213-3918472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr16:42339886-42340136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr16:12633591-12633828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
218, 29
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr16:49742312-49742037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
186, 94
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:23990805-23990530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
210, 42
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr16:18374254-18373976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
206, 222
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr16:15188880-15189156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
218, 51
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr16:27670854-27671155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 128
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr16:13611772-13611474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr16:29089610-29089304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
211, 104
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr16:5654197-5654514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
260, 60
               

               
Conread position:
               
3-98
               

               
Cow position:
               
chr16:48021547-48021642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr16:26667213-26667367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chr16:45131254-45131097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr16:5345487-5345318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr16:16567311-16567480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr16:44654549-44654385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr16:54423290-54423121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr16:52586321-52586120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr16:23027929-23028142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr16:52214223-52214436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr16:5293340-5293567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr16:41821311-41821541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr16:659776-660008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr16:8706868-8706635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr16:16369046-16368813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
205, 51
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr16:28376901-28376662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr16:1549192-1548957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
158, 71
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr16:7917484-7917722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
204, 84
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr16:33507748-33507984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr16:39616427-39616660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
218, 14
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr16:32586884-32587122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr16:4712583-4712842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
208, 162
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr16:5416070-5415817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
211, 58
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr16:23563824-23564078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr16:37062710-37062454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
211, 83
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr16:42092691-42092435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
218, 38
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr16:7702216-7702482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr16:18354266-18354004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
212, 38
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr16:39514402-39514125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:3633798-3634064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:30587459-30587730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
205, 88
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr16:33704488-33704761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr16:52527442-52527722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr16:18701470-18701757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
177, 157
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr16:18496483-18496187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr16:30639021-30639318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 209
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr16:12019148-12018847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
205, 182
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr16:31558574-31558881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
208, 139
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr16:33226849-33226551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
216, 10
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr16:53225121-53224806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
205, 14
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr16:4910846-4910520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 48
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr16:46752597-46752266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
101, 209
               

               
Conread position:
               
4-151
               

               
Cow position:
               
chr16:7504783-7504929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
4-156
               

               
Cow position:
               
chr16:34533657-34533810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr16:40441925-40442104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
161, 104
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr16:3308729-3308538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
161, 37
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr16:27276870-27276677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr16:18678881-18679087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr16:42409697-42409483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr16:18685942-18686167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
204, 21
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:192581-192342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:1957549-1957313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
204, 181
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:4059050-4059272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
216, 29
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr16:24128385-24128623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
217, 31
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr16:15363436-15363676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 50
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr16:52789749-52789992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
213, 28
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr16:17665321-17665578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
215, 37
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr16:56913030-56912775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
216, 31
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr16:8026158-8025897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
212, 57
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr16:16402645-16402368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
51, 218
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr16:47017558-47017295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
212, 20
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr16:47186485-47186205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
189, 81
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr16:40044746-40044460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
164, 224
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr16:54231136-54230852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
204, 75
               

               
Conread position:
               
5-142
               

               
Cow position:
               
chr16:22320042-22319905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr16:4098072-4097921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr16:16548292-16548497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr16:7136663-7136466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr16:56231507-56231761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
217, 203
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:49141874-49141624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr16:19757102-19756856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr16:7083049-7082781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
208, 150
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr16:40292950-40292666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
203, 219
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr16:4304571-4304283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr16:30143530-30143237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr16:28112230-28111933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
208, 48
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr16:40561910-40562231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
84, 217
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr16:33225774-33225608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr16:56196154-56195940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr16:42079154-42078899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 79
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr16:11568425-11568133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr16:48398558-48398255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
214, 48
               

               
Conread position:
               
7-129
               

               
Cow position:
               
chr16:56788234-56788113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr16:16554589-16554793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr16:52228489-52228718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
201, 37
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr16:43711785-43712020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr16:14800052-14799803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr16:32385133-32384881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr16:42242432-42242175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 106
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr16:48096076-48095812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
8-164
               

               
Cow position:
               
chr16:49216274-49216121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr16:16480254-16480028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
8-265
               

               
Cow position:
               
chr16:7974556-7974813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
200, 77
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr16:47343158-47343418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr16:42253882-42253613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr16:39854889-39854616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
200, 77
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr16:819942-820216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 24
               

               
Conread position:
               
8-306
               

               
Cow position:
               
chr16:28833529-28833819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
209, 132
               

               
Conread position:
               
9-148
               

               
Cow position:
               
chr16:8076977-8076838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr16:37018145-37017938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr16:14028933-14028687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr16:16177504-16177756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr16:7078050-7077803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr16:42734303-42734179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr16:39279389-39279117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
170, 161
               

               
Conread position:
               
10-303
               

               
Cow position:
               
chr16:37379959-37380249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
11-172
               

               
Cow position:
               
chr16:36121579-36121416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
12-126
               

               
Cow position:
               
chr16:53990962-53990848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-172
               

               
Cow position:
               
chr16:44451174-44451334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr16:53627729-53627454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
208, 29
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr16:14360798-14361081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
200, 78
               

               
Conread position:
               
13-129
               

               
Cow position:
               
chr16:12412699-12412583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-225
               

               
Cow position:
               
chr16:40304941-40305151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
13-237
               

               
Cow position:
               
chr16:19003825-19003603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr16:17456606-17456383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
13-265
               

               
Cow position:
               
chr16:37442436-37442185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
201, 171
               

               
Conread position:
               
13-274
               

               
Cow position:
               
chr16:13307170-13306915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
208, 31
               

               
Conread position:
               
13-325
               

               
Cow position:
               
chr16:2223712-2223398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
194, 18
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr16:43743246-43743051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr16:9973809-9973561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 194
               

               
Conread position:
               
14-286
               

               
Cow position:
               
chr16:8659062-8658786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
14-295
               

               
Cow position:
               
chr16:6032020-6031735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 226
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr16:35343780-35343529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
171, 10
               

               
Conread position:
               
15-274
               

               
Cow position:
               
chr16:7639687-7639943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 195
               

               
Conread position:
               
17-172
               

               
Cow position:
               
chr16:5292667-5292822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
17-216
               

               
Cow position:
               
chr16:8438931-8438741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
17-241
               

               
Cow position:
               
chr16:29078374-29078146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 210
               

               
Conread position:
               
17-241
               

               
Cow position:
               
chr16:41938914-41938689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
17-267
               

               
Cow position:
               
chr16:15370377-15370624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr16:51578723-51578439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
203, 75
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr16:19395832-19395654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
147, 87
               

               
Conread position:
               
18-262
               

               
Cow position:
               
chr16:48494856-48494618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
19-163
               

               
Cow position:
               
chr16:16963508-16963650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
19-201
               

               
Cow position:
               
chr16:3089983-3089803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
19-226
               

               
Cow position:
               
chr16:27701547-27701338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr16:33443283-33443065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
189, 66
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr16:31566038-31566309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
20-265
               

               
Cow position:
               
chr16:32132228-32132466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
200, 65
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr16:28855010-28854828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr16:7997913-7997700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
22-265
               

               
Cow position:
               
chr16:56198220-56198463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
200, 16
               

               
Conread position:
               
23-331
               

               
Cow position:
               
chr16:15542716-15543028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr16:3632996-3633237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 128
               

               
Conread position:
               
25-282
               

               
Cow position:
               
chr16:20731721-20731459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 200
               

               
Conread position:
               
26-159
               

               
Cow position:
               
chr16:50516192-50516059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr16:43724496-43724677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr16:23482994-23483246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
185, 164
               

               
Conread position:
               
28-265
               

               
Cow position:
               
chr16:33482145-33482378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 135
               

               
Conread position:
               
29-164
               

               
Cow position:
               
chr16:18036674-18036809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr16:51869347-51869593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
178, 143
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr16:12907105-12906806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
174, 132
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr16:13579129-13578988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
35-213
               

               
Cow position:
               
chr16:47780784-47780963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
35-241
               

               
Cow position:
               
chr16:1734991-1735196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
35-267
               

               
Cow position:
               
chr16:7456752-7456516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
35-285
               

               
Cow position:
               
chr16:21019119-21019373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
35-303
               

               
Cow position:
               
chr16:38903720-38903462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
230, 101
               

               
Conread position:
               
36-242
               

               
Cow position:
               
chr16:13689378-13689582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
37-242
               

               
Cow position:
               
chr16:43506084-43505881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
38-242
               

               
Cow position:
               
chr16:35243172-35243378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
39-265
               

               
Cow position:
               
chr16:35937054-35937278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
133, 124
               

               
Conread position:
               
40-274
               

               
Cow position:
               
chr16:30209482-30209708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
181, 53
               

               
Conread position:
               
42-163
               

               
Cow position:
               
chr16:56860913-56861034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-200
               

               
Cow position:
               
chr16:37718746-37718905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
42-211
               

               
Cow position:
               
chr16:15320750-15320579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
42-213
               

               
Cow position:
               
chr16:10933663-10933834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
42-218
               

               
Cow position:
               
chr16:22804860-22804698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
42-242
               

               
Cow position:
               
chr16:47820292-47820490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
111, 120
               

               
Conread position:
               
42-242
               

               
Cow position:
               
chr16:48424712-48424912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
166, 181
               

               
Conread position:
               
42-258
               

               
Cow position:
               
chr16:14106367-14106579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chr16:29379975-29380197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
170, 129
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chr16:33751918-33752137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 126
               

               
Conread position:
               
42-273
               

               
Cow position:
               
chr16:46655004-46655237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
42-274
               

               
Cow position:
               
chr16:34168316-34168550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
170, 129
               

               
Conread position:
               
42-285
               

               
Cow position:
               
chr16:52861481-52861234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
178, 111
               

               
Conread position:
               
42-286
               

               
Cow position:
               
chr16:29766065-29766302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
42-286
               

               
Cow position:
               
chr16:45566341-45566588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr16:6840469-6840279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
43-242
               

               
Cow position:
               
chr16:35205284-35205482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
165, 120
               

               
Conread position:
               
43-252
               

               
Cow position:
               
chr16:41654008-41654215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
44-265
               

               
Cow position:
               
chr16:39417384-39417177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
176, 20
               

               
Conread position:
               
44-286
               

               
Cow position:
               
chr16:49539134-49538888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
44-325
               

               
Cow position:
               
chr16:15960571-15960291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
170, 48
               

               
Conread position:
               
47-274
               

               
Cow position:
               
chr16:25287964-25287735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr16:20476259-20476478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr16:56846171-56845953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr16:29608245-29608505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
172, 112
               

               
Conread position:
               
51-284
               

               
Cow position:
               
chr16:2750725-2750956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
159, 26
               

               
Conread position:
               
52-242
               

               
Cow position:
               
chr16:24672628-24672437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chr16:11619485-11619688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
168, 109
               

               
Conread position:
               
52-331
               

               
Cow position:
               
chr16:10040106-10039839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
168, 8
               

               
Conread position:
               
53-226
               

               
Cow position:
               
chr16:13043529-13043700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr16:16231815-16232002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
168, 39
               

               
Conread position:
               
53-242
               

               
Cow position:
               
chr16:8367093-8366903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr16:571185-570973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr16:5363621-5363836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr16:8959331-8959118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 120
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr16:22786314-22786107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 39
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr16:27004932-27005143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
161, 102
               

               
Conread position:
               
53-266
               

               
Cow position:
               
chr16:52889678-52889468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
53-266
               

               
Cow position:
               
chr16:53892048-53891840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
53-267
               

               
Cow position:
               
chr16:24403462-24403681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
155, 212
               

               
Conread position:
               
53-301
               

               
Cow position:
               
chr16:47662445-47662692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
155, 112
               

               
Conread position:
               
53-331
               

               
Cow position:
               
chr16:24702584-24702859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
155, 113
               

               
Conread position:
               
53-331
               

               
Cow position:
               
chr16:44744400-44744128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
54-212
               

               
Cow position:
               
chr16:44898998-44898842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
54-213
               

               
Cow position:
               
chr16:33406024-33405871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
54-213
               

               
Cow position:
               
chr16:46434383-46434234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
54-242
               

               
Cow position:
               
chr16:53086591-53086413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
54-265
               

               
Cow position:
               
chr16:53613032-53613244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
54-297
               

               
Cow position:
               
chr16:20634137-20633901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
160, 44
               

               
Conread position:
               
54-303
               

               
Cow position:
               
chr16:37116807-37117054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 107
               

               
Conread position:
               
55-265
               

               
Cow position:
               
chr16:39705106-39704898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
153, 108
               

               
Conread position:
               
56-155
               

               
Cow position:
               
chr16:54225969-54225871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
56-242
               

               
Cow position:
               
chr16:5256738-5256917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 55
               

               
Conread position:
               
56-265
               

               
Cow position:
               
chr16:902152-901942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
133, 166
               

               
Conread position:
               
56-265
               

               
Cow position:
               
chr16:25484103-25484305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
164, 35
               

               
Conread position:
               
56-331
               

               
Cow position:
               
chr16:17745569-17745841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr16:43308825-43308613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr16:11103090-11102870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr16:14754586-14754370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
154, 109
               

               
Conread position:
               
57-325
               

               
Cow position:
               
chr16:3614484-3614746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
210, 108
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr16:45813954-45813757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
60-212
               

               
Cow position:
               
chr16:9235740-9235588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-265
               

               
Cow position:
               
chr16:14242114-14242311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
60-265
               

               
Cow position:
               
chr16:48385662-48385460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
61-159
               

               
Cow position:
               
chr16:22052186-22052284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-202
               

               
Cow position:
               
chr16:16597302-16597443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-274
               

               
Cow position:
               
chr16:35623509-35623290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr16:20025185-20025423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
203, 81
               

               
Conread position:
               
63-240
               

               
Cow position:
               
chr16:42777705-42777882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 158
               

               
Conread position:
               
63-319
               

               
Cow position:
               
chr16:35195868-35195613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
64-265
               

               
Cow position:
               
chr16:7429121-7429318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
65-225
               

               
Cow position:
               
chr16:45157696-45157537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
65-289
               

               
Cow position:
               
chr16:8933675-8933456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
65-325
               

               
Cow position:
               
chr16:26649889-26649630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
66-242
               

               
Cow position:
               
chr16:19408768-19408599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
66-262
               

               
Cow position:
               
chr16:11615483-11615295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
158, 92
               

               
Conread position:
               
66-265
               

               
Cow position:
               
chr16:238006-238206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
67-240
               

               
Cow position:
               
chr16:26373205-26373036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
143, 99
               

               
Conread position:
               
67-257
               

               
Cow position:
               
chr16:9985636-9985454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
68-213
               

               
Cow position:
               
chr16:51070182-51070037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
70-242
               

               
Cow position:
               
chr16:9728953-9729124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 102
               

               
Conread position:
               
70-274
               

               
Cow position:
               
chr16:11008093-11008296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
195, 11
               

               
Conread position:
               
70-274
               

               
Cow position:
               
chr16:38905477-38905276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
70-289
               

               
Cow position:
               
chr16:30909182-30908958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 103
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr16:13969629-13969419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr16:14568734-14568532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
74-265
               

               
Cow position:
               
chr16:47620133-47620321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 89
               

               
Conread position:
               
75-304
               

               
Cow position:
               
chr16:32327406-32327633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
192, 91
               

               
Conread position:
               
76-265
               

               
Cow position:
               
chr16:29557876-29557687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr16:39695715-39695557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr16:30037231-30037051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr16:7152408-7152219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
91-330
               

               
Cow position:
               
chr16:48191232-48190997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
95-265
               

               
Cow position:
               
chr16:43105739-43105572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
104-295
               

               
Cow position:
               
chr16:30705889-30706081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 181
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr16:42443946-42444155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 106
               
Show alignments to all cow chromosomes.