Cow genome map


           Conread name:
           Ss1.1-rcad22b_p5.5
        

               Conread position:
               1-108
               

               Cow position:
               chr23:21208116-21208009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-336
               

               Cow position:
               chr23:5422323-5422551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-344
               

               Cow position:
               chr23:5625961-5626197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               193, 206
               

               Conread position:
               108-355
               

               Cow position:
               chr23:21205942-21205695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               176-344
               

               Cow position:
               chr23:22969006-22968838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               358-492
               

               Cow position:
               chr23:21205245-21205111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               120
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               363-492
               

               Cow position:
               chr23:5424047-5424176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.