Cow genome map

Conread name: Ss1.1-rcbe05_f3.5

Conread position: 83-214
Cow position: chr14:1493021-1492889 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 125

Conread position: 208-432
Cow position: chr14:11027226-11026992 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 212-540
Cow position: chr14:7964402-7964747 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 132

Conread position: 215-397
Cow position: chr14:7827522-7827331 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 180

Conread position: 215-412
Cow position: chr14:18248293-18248084 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 200

Conread position: 215-432
Cow position: chr14:33872602-33872827 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 49

Conread position: 215-433
Cow position: chr14:39968679-39968896 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 130

Conread position: 215-433
Cow position: chr14:41091441-41091210 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 26

Conread position: 215-436
Cow position: chr14:11142018-11141785 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 10

Conread position: 215-436
Cow position: chr14:48270844-48270614 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 131

Conread position: 215-469
Cow position: chr14:40195213-40194954 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 238

Conread position: 215-479
Cow position: chr14:12070733-12071007 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 264

Conread position: 215-540
Cow position: chr14:37790361-37790684 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 74, 40

Conread position: 216-392
Cow position: chr14:26933193-26933005 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 216-392
Cow position: chr14:42863360-42863539 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 25

Conread position: 216-398
Cow position: chr14:37064206-37064396 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 216-405
Cow position: chr14:2017278-2017080 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 40

Conread position: 216-411
Cow position: chr14:27208205-27208001 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 21

Conread position: 216-412
Cow position: chr14:5501793-5502001 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 216-412
Cow position: chr14:14752240-14752036 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 38

Conread position: 216-415
Cow position: chr14:7633783-7633990 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 216-424
Cow position: chr14:20468867-20469086 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 39

Conread position: 216-429
Cow position: chr14:11724393-11724174 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 97

Conread position: 216-429
Cow position: chr14:21047926-21047702 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 170

Conread position: 216-429
Cow position: chr14:24706898-24706680 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 164

Conread position: 216-429
Cow position: chr14:41921254-41921475 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 158

Conread position: 216-430
Cow position: chr14:42823261-42823490 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 216-432
Cow position: chr14:266923-266707 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 40

Conread position: 216-432
Cow position: chr14:20036595-20036368 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 216-432
Cow position: chr14:20372020-20372248 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 38

Conread position: 216-433
Cow position: chr14:1734693-1734468 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 38

Conread position: 216-433
Cow position: chr14:37635110-37634881 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 218

Conread position: 216-435
Cow position: chr14:42300965-42301183 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 78

Conread position: 216-436
Cow position: chr14:8873111-8872890 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 154

Conread position: 216-436
Cow position: chr14:11545269-11545493 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 9

Conread position: 216-436
Cow position: chr14:17667784-17667555 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 216-436
Cow position: chr14:25168306-25168082 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 142

Conread position: 216-436
Cow position: chr14:33184026-33184258 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 216-437
Cow position: chr14:2826491-2826715 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 86

Conread position: 216-437
Cow position: chr14:20803497-20803272 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 38

Conread position: 216-444
Cow position: chr14:38700622-38700384 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 17

Conread position: 216-449
Cow position: chr14:21919686-21919446 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 26

Conread position: 216-461
Cow position: chr14:38631183-38630943 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 23

Conread position: 216-533
Cow position: chr14:14265611-14265287 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 39

Conread position: 216-535
Cow position: chr14:19792869-19792531 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 161

Conread position: 216-537
Cow position: chr14:35527035-35527347 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 21

Conread position: 216-538
Cow position: chr14:7962981-7962655 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 45

Conread position: 216-538
Cow position: chr14:24519836-24520176 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 279

Conread position: 216-538
Cow position: chr14:40989981-40990320 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 283

Conread position: 216-539
Cow position: chr14:34496958-34496627 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 39

Conread position: 216-539
Cow position: chr14:37610692-37611027 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 28

Conread position: 216-539
Cow position: chr14:41096046-41095714 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 73, 22

Conread position: 216-540
Cow position: chr14:13418540-13418218 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 216-540
Cow position: chr14:19271998-19271667 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 137

Conread position: 216-540
Cow position: chr14:30271361-30271018 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 72, 37

Conread position: 216-540
Cow position: chr14:39338055-39337722 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 45

Conread position: 217-434
Cow position: chr14:27860734-27860506 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 14

Conread position: 217-436
Cow position: chr14:44714114-44713887 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 131, 38

Conread position: 217-526
Cow position: chr14:35370818-35370513 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 20

Conread position: 217-540
Cow position: chr14:20252195-20251867 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 17

Conread position: 218-416
Cow position: chr14:39322360-39322570 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 218-433
Cow position: chr14:33269580-33269353 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 218-539
Cow position: chr14:37797969-37797633 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 239

Conread position: 219-433
Cow position: chr14:23271196-23270971 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 217

Conread position: 223-537
Cow position: chr14:22194613-22194280 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 198

Conread position: 225-432
Cow position: chr14:25477158-25477373 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 32

Conread position: 225-437
Cow position: chr14:31618976-31619193 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 30

Conread position: 225-442
Cow position: chr14:41673424-41673650 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 227-540
Cow position: chr14:47482472-47482144 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 20

Conread position: 230-433
Cow position: chr14:35666557-35666346 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 236-441
Cow position: chr14:38539054-38538841 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 198

Conread position: 237-431
Cow position: chr14:20913188-20913392 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 96

Conread position: 237-434
Cow position: chr14:39627340-39627547 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 34

Conread position: 240-433
Cow position: chr14:37208304-37208504 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 240-538
Cow position: chr14:23461295-23460978 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 146

Conread position: 241-447
Cow position: chr14:25853984-25853767 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 78

Conread position: 242-539
Cow position: chr14:39505150-39504833 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 244-433
Cow position: chr14:14242206-14242009 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 11

Conread position: 244-457
Cow position: chr14:29853268-29853053 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 44

Conread position: 245-457
Cow position: chr14:31225352-31225573 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 246-432
Cow position: chr14:18880351-18880164 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 68

Conread position: 246-540
Cow position: chr14:34193929-34193627 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 132

Conread position: 249-436
Cow position: chr14:21691541-21691739 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 250-433
Cow position: chr14:34662093-34661899 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 256-433
Cow position: chr14:42596041-42595850 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 264-452
Cow position: chr14:11009465-11009656 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 107

Conread position: 266-436
Cow position: chr14:18430000-18429820 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 148

Conread position: 270-539
Cow position: chr14:41971392-41971124 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 43

Conread position: 296-433
Cow position: chr14:14919027-14919165 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 297-446
Cow position: chr14:1658120-1658272 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 300-441
Cow position: chr14:42801857-42801717 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 300-539
Cow position: chr14:195393-195634 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 78

Conread position: 300-540
Cow position: chr14:5051867-5052114 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 109

Conread position: 301-536
Cow position: chr14:37352719-37352471 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 135

Conread position: 304-540
Cow position: chr14:8995837-8996079 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 61

Conread position: 309-538
Cow position: chr14:20523625-20523380 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 312-539
Cow position: chr14:18242015-18242255 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 91, 206

Conread position: 315-540
Cow position: chr14:44995175-44994947 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 141

Show alignments to all cow chromosomes.