Cow genome map

Conread name: Ss1.1-rcbe05_f3.5

Conread position: 4-215
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 60

Conread position: 42-218
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 12

Conread position: 79-218
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 103

Conread position: 212-432
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 13

Conread position: 212-446
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 77, 17

Conread position: 214-532
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 74, 60

Conread position: 215-417
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 138

Conread position: 215-425
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 215-433
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 144

Conread position: 215-433
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 215-433
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 215-433
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 215-436
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 33

Conread position: 215-438
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 94

Conread position: 215-442
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 40

Conread position: 215-446
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 93, 46

Conread position: 215-538
Cow position:
Alignm length: 353
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 268

Conread position: 215-540
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 155

Conread position: 215-540
Cow position:
Alignm length: 331
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 41

Conread position: 216-384
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 216-388
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 37

Conread position: 216-395
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 216-399
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 36

Conread position: 216-404
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 216-412
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 116

Conread position: 216-413
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 216-425
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 216-425
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 174

Conread position: 216-427
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 23

Conread position: 216-432
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 199

Conread position: 216-433
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 117

Conread position: 216-433
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 133

Conread position: 216-433
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 216-433
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 12

Conread position: 216-433
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 9

Conread position: 216-433
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 215

Conread position: 216-433
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 198

Conread position: 216-434
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 18

Conread position: 216-435
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 73, 44

Conread position: 216-436
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 119

Conread position: 216-436
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 70, 101

Conread position: 216-436
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 97

Conread position: 216-436
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 24

Conread position: 216-436
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 74, 26

Conread position: 216-436
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 47, 40

Conread position: 216-436
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 219

Conread position: 216-436
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 216-437
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 216-438
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 38

Conread position: 216-439
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 168

Conread position: 216-440
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 216-442
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 79

Conread position: 216-442
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 216-445
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 24

Conread position: 216-447
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 11

Conread position: 216-468
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 231

Conread position: 216-510
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 60

Conread position: 216-526
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 180

Conread position: 216-533
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 28

Conread position: 216-537
Cow position:
Alignm length: 349
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 16

Conread position: 216-537
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 168

Conread position: 216-537
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 61, 12

Conread position: 216-538
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 38

Conread position: 216-538
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 82

Conread position: 216-538
Cow position:
Alignm length: 353
Alignm identity: 240
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 39

Conread position: 216-539
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 168

Conread position: 216-539
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 73, 156

Conread position: 216-539
Cow position:
Alignm length: 341
Alignm identity: 230
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 294

Conread position: 216-540
Cow position:
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 273

Conread position: 216-540
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 9

Conread position: 216-540
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 315

Conread position: 216-540
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 293

Conread position: 216-540
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 216-540
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 297

Conread position: 216-540
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 128

Conread position: 216-540
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 73, 39

Conread position: 216-540
Cow position:
Alignm length: 355
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 27

Conread position: 217-397
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 217-433
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 33

Conread position: 217-433
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 38

Conread position: 217-443
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 41

Conread position: 217-539
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 16

Conread position: 217-540
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 24

Conread position: 218-391
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 20

Conread position: 218-430
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 37

Conread position: 218-433
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 31

Conread position: 218-540
Cow position:
Alignm length: 333
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 15

Conread position: 219-416
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 35

Conread position: 219-417
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 219-433
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 219-433
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 219-437
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 184

Conread position: 219-535
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 308

Conread position: 220-430
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 35

Conread position: 220-436
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 220-436
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 34

Conread position: 220-442
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 57

Conread position: 220-442
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 57

Conread position: 220-461
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 68, 78

Conread position: 221-536
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 34

Conread position: 222-436
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 224-433
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 224-523
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 126

Conread position: 225-540
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 267

Conread position: 225-540
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 30

Conread position: 229-402
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 177

Conread position: 229-436
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 7

Conread position: 230-436
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 150

Conread position: 230-436
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 45

Conread position: 231-421
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 48

Conread position: 231-435
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 231-436
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 25

Conread position: 232-436
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 174

Conread position: 232-436
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 232-436
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 30

Conread position: 232-540
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 39

Conread position: 237-422
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 173

Conread position: 241-431
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 55

Conread position: 241-433
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 241-540
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 141

Conread position: 244-436
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 17, 10

Conread position: 245-436
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 67

Conread position: 251-531
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 27

Conread position: 252-434
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 89

Conread position: 255-511
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 24

Conread position: 256-433
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 39

Conread position: 258-538
Cow position:
Alignm length: 295
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 40

Conread position: 264-435
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 271-436
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 31

Conread position: 271-540
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 29

Conread position: 294-540
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 6

Conread position: 296-540
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 5

Conread position: 297-432
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 297-538
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 217

Conread position: 297-539
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 20

Conread position: 297-540
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 104

Conread position: 298-474
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 85

Conread position: 301-540
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 137, 67

Conread position: 302-458
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 11

Conread position: 302-526
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 53

Conread position: 303-436
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 303-540
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 82

Conread position: 309-538
Cow position:
Alignm length: 238
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 310-436
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 320-436
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 57

Show alignments to all cow chromosomes.