Cow genome map
| Conread name: | Ss1.1-rcbe05_f3.5 |
| Conread position: | 83-221 |
| Cow position: | chr18:39631011-39631152 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 207-436 |
| Cow position: | chr18:56272885-56273125 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 185 |
| Conread position: | 211-540 |
| Cow position: | chr18:10663333-10663690 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 212-409 |
| Cow position: | chr18:21212356-21212553 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 214-437 |
| Cow position: | chr18:11568734-11568966 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 214-540 |
| Cow position: | chr18:13160074-13160395 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 215-431 |
| Cow position: | chr18:14837448-14837671 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 215-432 |
| Cow position: | chr18:16163414-16163188 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 214 |
| Conread position: | 215-433 |
| Cow position: | chr18:45629472-45629243 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 215-434 |
| Cow position: | chr18:17454027-17453799 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 215-436 |
| Cow position: | chr18:35489318-35489547 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 215-436 |
| Cow position: | chr18:51301335-51301564 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 215-437 |
| Cow position: | chr18:26994962-26994730 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 215-455 |
| Cow position: | chr18:47523593-47523352 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 215-475 |
| Cow position: | chr18:11614649-11614921 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 215-526 |
| Cow position: | chr18:43178298-43177988 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 215-532 |
| Cow position: | chr18:14143342-14143676 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 215-539 |
| Cow position: | chr18:53756308-53756647 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 267 |
| Conread position: | 215-540 |
| Cow position: | chr18:14286814-14286474 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 136 |
| Conread position: | 215-540 |
| Cow position: | chr18:38924056-38923715 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 220 |
| Conread position: | 215-540 |
| Cow position: | chr18:40312934-40312598 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 70, 260 |
| Conread position: | 215-540 |
| Cow position: | chr18:47562665-47562324 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 216-401 |
| Cow position: | chr18:28189174-28188984 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 151 |
| Conread position: | 216-404 |
| Cow position: | chr18:8761179-8761374 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 216-409 |
| Cow position: | chr18:21213511-21213715 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 216-410 |
| Cow position: | chr18:33056913-33057116 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 216-417 |
| Cow position: | chr18:950199-950408 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 216-417 |
| Cow position: | chr18:13338782-13338986 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 216-417 |
| Cow position: | chr18:14403916-14403707 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 140 |
| Conread position: | 216-425 |
| Cow position: | chr18:22600272-22600482 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 216-427 |
| Cow position: | chr18:17701081-17701293 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 216-430 |
| Cow position: | chr18:41168442-41168664 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 216-431 |
| Cow position: | chr18:1709720-1709936 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 216-432 |
| Cow position: | chr18:158621-158405 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 93 |
| Conread position: | 216-432 |
| Cow position: | chr18:10744433-10744210 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 216-433 |
| Cow position: | chr18:6795302-6795074 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 195 |
| Conread position: | 216-433 |
| Cow position: | chr18:7119757-7119536 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 216-433 |
| Cow position: | chr18:17358939-17358712 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 216-433 |
| Cow position: | chr18:17735307-17735082 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 71 |
| Conread position: | 216-433 |
| Cow position: | chr18:33024881-33025105 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 6, 137 |
| Conread position: | 216-433 |
| Cow position: | chr18:45401358-45401583 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 216-434 |
| Cow position: | chr18:52716528-52716302 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 216-436 |
| Cow position: | chr18:9854966-9854736 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 113 |
| Conread position: | 216-436 |
| Cow position: | chr18:13847818-13847596 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 216-436 |
| Cow position: | chr18:14049133-14049364 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 216-436 |
| Cow position: | chr18:18056621-18056397 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 216-436 |
| Cow position: | chr18:29633229-29633457 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-436 |
| Cow position: | chr18:30216218-30216445 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-436 |
| Cow position: | chr18:30783471-30783243 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 216-436 |
| Cow position: | chr18:37758404-37758176 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 216-436 |
| Cow position: | chr18:37845104-37844886 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 216-436 |
| Cow position: | chr18:43222210-43221983 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 216-437 |
| Cow position: | chr18:30690420-30690200 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 216-441 |
| Cow position: | chr18:11669206-11668973 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-442 |
| Cow position: | chr18:48673461-48673241 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 216-443 |
| Cow position: | chr18:17750660-17750437 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 216-444 |
| Cow position: | chr18:32538992-32538757 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 216-446 |
| Cow position: | chr18:36980894-36981137 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-446 |
| Cow position: | chr18:52803508-52803744 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 216-449 |
| Cow position: | chr18:48534513-48534753 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 216-453 |
| Cow position: | chr18:10260879-10260630 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 216-494 |
| Cow position: | chr18:37678849-37679135 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 216-507 |
| Cow position: | chr18:28201654-28201952 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 216-520 |
| Cow position: | chr18:40840303-40840018 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 282, 39 |
| Conread position: | 216-533 |
| Cow position: | chr18:17357743-17358067 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 216-534 |
| Cow position: | chr18:23936255-23936575 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 216-535 |
| Cow position: | chr18:4509419-4509098 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 216-536 |
| Cow position: | chr18:1007925-1007620 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 196, 39 |
| Conread position: | 216-536 |
| Cow position: | chr18:30676087-30676422 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 216-538 |
| Cow position: | chr18:19683140-19682809 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 170 |
| Conread position: | 216-538 |
| Cow position: | chr18:21239846-21240189 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 216-538 |
| Cow position: | chr18:49156351-49156014 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 216-538 |
| Cow position: | chr18:49686538-49686881 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 216-538 |
| Cow position: | chr18:49782922-49782588 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 216-539 |
| Cow position: | chr18:740523-740861 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 216-539 |
| Cow position: | chr18:7682656-7682330 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 216-539 |
| Cow position: | chr18:20010662-20010336 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 216-539 |
| Cow position: | chr18:51251866-51252209 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 54, 235 |
| Conread position: | 216-539 |
| Cow position: | chr18:52934154-52934478 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 216-540 |
| Cow position: | chr18:7085549-7085888 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 146 |
| Conread position: | 216-540 |
| Cow position: | chr18:11603307-11603642 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 6 |
| Conread position: | 216-540 |
| Cow position: | chr18:14749929-14750262 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 216-540 |
| Cow position: | chr18:16508804-16508481 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 216-540 |
| Cow position: | chr18:19273787-19274137 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 216-540 |
| Cow position: | chr18:19840301-19840629 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 76, 260 |
| Conread position: | 216-540 |
| Cow position: | chr18:24712017-24711684 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 216-540 |
| Cow position: | chr18:28931960-28932285 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 216-540 |
| Cow position: | chr18:32046629-32046953 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 127, 85 |
| Conread position: | 216-540 |
| Cow position: | chr18:35729053-35729382 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 124 |
| Conread position: | 216-540 |
| Cow position: | chr18:38784881-38785210 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 216-540 |
| Cow position: | chr18:39975982-39975658 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 216-540 |
| Cow position: | chr18:54860978-54860654 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 217-412 |
| Cow position: | chr18:21245374-21245575 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 217-431 |
| Cow position: | chr18:31718098-31718321 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 217-442 |
| Cow position: | chr18:43998259-43998498 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 218 |
| Conread position: | 217-535 |
| Cow position: | chr18:16152459-16152786 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 217-539 |
| Cow position: | chr18:49568374-49568725 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 218-539 |
| Cow position: | chr18:48310031-48309686 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 338 |
| Conread position: | 219-359 |
| Cow position: | chr18:20317877-20317736 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 219-433 |
| Cow position: | chr18:48660393-48660617 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 219-438 |
| Cow position: | chr18:260535-260307 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 220-432 |
| Cow position: | chr18:18670790-18670570 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 68, 161 |
| Conread position: | 220-446 |
| Cow position: | chr18:48154844-48154610 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 220-476 |
| Cow position: | chr18:48530511-48530779 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 220-529 |
| Cow position: | chr18:30853182-30852855 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 165 |
| Conread position: | 220-538 |
| Cow position: | chr18:12584487-12584160 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 181 |
| Conread position: | 220-538 |
| Cow position: | chr18:18371208-18370865 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 220-539 |
| Cow position: | chr18:47670432-47670756 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 70, 236 |
| Conread position: | 220-540 |
| Cow position: | chr18:21373699-21374020 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 220-540 |
| Cow position: | chr18:39412796-39413128 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 221-537 |
| Cow position: | chr18:38625190-38625523 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 223-540 |
| Cow position: | chr18:21357555-21357886 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 67, 101 |
| Conread position: | 224-417 |
| Cow position: | chr18:40078205-40078002 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 224-433 |
| Cow position: | chr18:6021646-6021431 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 224-540 |
| Cow position: | chr18:53041449-53041106 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 225-431 |
| Cow position: | chr18:24751747-24751534 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 126 |
| Conread position: | 225-433 |
| Cow position: | chr18:52776629-52776847 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 225-434 |
| Cow position: | chr18:3962509-3962288 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 225-539 |
| Cow position: | chr18:14409026-14408686 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 292 |
| Conread position: | 225-540 |
| Cow position: | chr18:53280071-53279756 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 226-538 |
| Cow position: | chr18:41269545-41269873 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 213 |
| Conread position: | 227-540 |
| Cow position: | chr18:40220668-40220991 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 141 |
| Conread position: | 229-433 |
| Cow position: | chr18:45936514-45936731 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 163 |
| Conread position: | 230-430 |
| Cow position: | chr18:23882251-23882460 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 238-436 |
| Cow position: | chr18:23628810-23629011 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 105, 50 |
| Conread position: | 240-392 |
| Cow position: | chr18:17430820-17430978 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 240-435 |
| Cow position: | chr18:44519704-44519910 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 193 |
| Conread position: | 240-436 |
| Cow position: | chr18:45425954-45425747 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 240-540 |
| Cow position: | chr18:30373417-30373721 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 240-540 |
| Cow position: | chr18:55689278-55689573 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 241-444 |
| Cow position: | chr18:18248426-18248634 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 241-447 |
| Cow position: | chr18:456584-456795 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 242-432 |
| Cow position: | chr18:1171911-1172106 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 245-540 |
| Cow position: | chr18:14456419-14456723 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 246-458 |
| Cow position: | chr18:41391516-41391726 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 255-436 |
| Cow position: | chr18:52790841-52790663 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 256-430 |
| Cow position: | chr18:41009537-41009358 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 144 |
| Conread position: | 256-540 |
| Cow position: | chr18:42722422-42722733 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 260-433 |
| Cow position: | chr18:37308973-37309148 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 261-415 |
| Cow position: | chr18:31157037-31157196 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 261-436 |
| Cow position: | chr18:32428152-32427967 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 262-456 |
| Cow position: | chr18:19773233-19773034 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 271-432 |
| Cow position: | chr18:17755952-17755799 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 296-436 |
| Cow position: | chr18:31983760-31983903 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 297-436 |
| Cow position: | chr18:16312940-16313082 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 297-442 |
| Cow position: | chr18:23260536-23260681 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 297-442 |
| Cow position: | chr18:28273348-28273205 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 300-438 |
| Cow position: | chr18:21101366-21101506 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 300-539 |
| Cow position: | chr18:37111514-37111293 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 300-540 |
| Cow position: | chr18:29953604-29953354 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 301-446 |
| Cow position: | chr18:19907715-19907570 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 301-527 |
| Cow position: | chr18:5965740-5965507 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 302-435 |
| Cow position: | chr18:41899483-41899353 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 302-438 |
| Cow position: | chr18:21104647-21104509 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 302-525 |
| Cow position: | chr18:941335-941555 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 302-540 |
| Cow position: | chr18:41519391-41519634 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 304-470 |
| Cow position: | chr18:6377854-6378023 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 304-476 |
| Cow position: | chr18:20228488-20228666 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 305-540 |
| Cow position: | chr18:33873167-33872915 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 311-433 |
| Cow position: | chr18:28666656-28666781 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 315-540 |
| Cow position: | chr18:10119294-10119524 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 316-442 |
| Cow position: | chr18:23464242-23464116 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 321-444 |
| Cow position: | chr18:31523879-31523752 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.