Cow genome map
| Conread name: | Ss1.1-rcbe05_f3.5 |
| Conread position: | 80-217 |
| Cow position: | chr21:4939490-4939629 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 209-410 |
| Cow position: | chr21:33209940-33210152 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 210-389 |
| Cow position: | chr21:21428260-21428450 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 212-499 |
| Cow position: | chr21:13250593-13250298 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 161 |
| Conread position: | 212-539 |
| Cow position: | chr21:1264009-1264347 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 81, 258 |
| Conread position: | 212-540 |
| Cow position: | chr21:12782399-12782052 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 213-397 |
| Cow position: | chr21:38900518-38900715 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 175 |
| Conread position: | 214-431 |
| Cow position: | chr21:16480862-16480633 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 215-390 |
| Cow position: | chr21:22122629-22122453 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 215-429 |
| Cow position: | chr21:42908285-42908060 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 191 |
| Conread position: | 215-433 |
| Cow position: | chr21:6297705-6297934 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 215-434 |
| Cow position: | chr21:9732855-9732624 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 217 |
| Conread position: | 215-434 |
| Cow position: | chr21:31439675-31439448 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 63, 197 |
| Conread position: | 215-436 |
| Cow position: | chr21:44193208-44192985 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 70, 152 |
| Conread position: | 215-444 |
| Cow position: | chr21:17794447-17794208 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 215-540 |
| Cow position: | chr21:5090844-5091189 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 215-540 |
| Cow position: | chr21:29769508-29769171 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 170 |
| Conread position: | 216-340 |
| Cow position: | chr21:46985684-46985556 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 216-387 |
| Cow position: | chr21:16230850-16231032 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-390 |
| Cow position: | chr21:21021391-21021560 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 216-397 |
| Cow position: | chr21:9415990-9416183 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-405 |
| Cow position: | chr21:22945320-22945512 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 93 |
| Conread position: | 216-407 |
| Cow position: | chr21:9398831-9399026 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 216-412 |
| Cow position: | chr21:19800054-19800256 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-417 |
| Cow position: | chr21:13040775-13040569 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 157 |
| Conread position: | 216-423 |
| Cow position: | chr21:19623148-19623364 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 216-425 |
| Cow position: | chr21:32193451-32193668 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 72, 170 |
| Conread position: | 216-426 |
| Cow position: | chr21:12314055-12314279 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 216-429 |
| Cow position: | chr21:7697023-7697241 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 216-431 |
| Cow position: | chr21:6025256-6025031 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 216-432 |
| Cow position: | chr21:12466104-12466327 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 216-433 |
| Cow position: | chr21:24981075-24981286 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 216-433 |
| Cow position: | chr21:28173509-28173284 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 216-433 |
| Cow position: | chr21:34511493-34511267 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 68, 187 |
| Conread position: | 216-433 |
| Cow position: | chr21:34618135-34618365 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-433 |
| Cow position: | chr21:37191487-37191263 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 216-433 |
| Cow position: | chr21:40178138-40178366 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-434 |
| Cow position: | chr21:13133226-13132993 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-434 |
| Cow position: | chr21:29653688-29653920 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 216-434 |
| Cow position: | chr21:36357873-36358101 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 176 |
| Conread position: | 216-436 |
| Cow position: | chr21:2404733-2404965 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 216-436 |
| Cow position: | chr21:23971083-23970860 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 134 |
| Conread position: | 216-436 |
| Cow position: | chr21:29908002-29907776 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 73, 138 |
| Conread position: | 216-436 |
| Cow position: | chr21:30327873-30328096 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 216-436 |
| Cow position: | chr21:38643701-38643927 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 216-436 |
| Cow position: | chr21:42633900-42633673 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 216-436 |
| Cow position: | chr21:46386140-46385922 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 216-436 |
| Cow position: | chr21:46598780-46598553 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 145 |
| Conread position: | 216-438 |
| Cow position: | chr21:2906149-2905915 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 216-439 |
| Cow position: | chr21:45843895-45843660 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 186 |
| Conread position: | 216-440 |
| Cow position: | chr21:39763978-39763747 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 216-442 |
| Cow position: | chr21:2157851-2158083 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 216-442 |
| Cow position: | chr21:42686913-42686687 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 216-444 |
| Cow position: | chr21:4860409-4860176 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 216-444 |
| Cow position: | chr21:35815993-35816232 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 216-444 |
| Cow position: | chr21:36620396-36620171 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 216-446 |
| Cow position: | chr21:46833527-46833288 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 216-448 |
| Cow position: | chr21:23658292-23658537 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-471 |
| Cow position: | chr21:17032831-17032564 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 216-476 |
| Cow position: | chr21:10156503-10156235 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 189 |
| Conread position: | 216-477 |
| Cow position: | chr21:44092388-44092116 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 260 |
| Conread position: | 216-526 |
| Cow position: | chr21:35779447-35779130 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 216-536 |
| Cow position: | chr21:17839778-17840113 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 158 |
| Conread position: | 216-536 |
| Cow position: | chr21:29634342-29634679 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 194 |
| Conread position: | 216-538 |
| Cow position: | chr21:25630504-25630830 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 216-539 |
| Cow position: | chr21:11326868-11326530 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 78, 194 |
| Conread position: | 216-539 |
| Cow position: | chr21:16118015-16117675 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 172 |
| Conread position: | 216-539 |
| Cow position: | chr21:35643404-35643067 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 216-539 |
| Cow position: | chr21:40083554-40083857 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 216-540 |
| Cow position: | chr21:4177956-4177622 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 72, 172 |
| Conread position: | 216-540 |
| Cow position: | chr21:27551707-27551363 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 70, 202 |
| Conread position: | 216-540 |
| Cow position: | chr21:43704547-43704883 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 164 |
| Conread position: | 217-404 |
| Cow position: | chr21:26421916-26421716 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 217-446 |
| Cow position: | chr21:30313664-30313893 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 217-526 |
| Cow position: | chr21:39420518-39420191 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 162 |
| Conread position: | 217-536 |
| Cow position: | chr21:39046430-39046754 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 218-412 |
| Cow position: | chr21:14508918-14509114 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 218-431 |
| Cow position: | chr21:22556709-22556931 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 218-432 |
| Cow position: | chr21:46556406-46556189 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 218-538 |
| Cow position: | chr21:13532139-13531804 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 242 |
| Conread position: | 218-540 |
| Cow position: | chr21:12271351-12271689 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 219-433 |
| Cow position: | chr21:23675086-23675308 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 219-436 |
| Cow position: | chr21:43352155-43351928 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 219-443 |
| Cow position: | chr21:20234518-20234285 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 219-540 |
| Cow position: | chr21:36070515-36070176 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 170 |
| Conread position: | 220-383 |
| Cow position: | chr21:17520903-17520736 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 220-433 |
| Cow position: | chr21:15944252-15944464 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 220-535 |
| Cow position: | chr21:5593230-5592892 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 220-540 |
| Cow position: | chr21:34547922-34547584 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 70, 315 |
| Conread position: | 221-436 |
| Cow position: | chr21:15959150-15959375 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 221-439 |
| Cow position: | chr21:18045582-18045358 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 173 |
| Conread position: | 221-532 |
| Cow position: | chr21:22864924-22865240 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 217, 17 |
| Conread position: | 221-540 |
| Cow position: | chr21:27355205-27355538 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 195 |
| Conread position: | 222-409 |
| Cow position: | chr21:26182898-26182699 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 168 |
| Conread position: | 222-436 |
| Cow position: | chr21:11076553-11076328 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 222-436 |
| Cow position: | chr21:31706816-31707042 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 229-434 |
| Cow position: | chr21:39081285-39081065 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 230-436 |
| Cow position: | chr21:876180-876399 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 233-437 |
| Cow position: | chr21:13432217-13432006 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 233-531 |
| Cow position: | chr21:37664977-37664675 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 235-433 |
| Cow position: | chr21:16981350-16981548 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 241-412 |
| Cow position: | chr21:34394750-34394570 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 249-539 |
| Cow position: | chr21:29078785-29078472 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 251-437 |
| Cow position: | chr21:15913426-15913622 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 251-456 |
| Cow position: | chr21:21126651-21126870 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 256-438 |
| Cow position: | chr21:34485969-34486152 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 256-540 |
| Cow position: | chr21:47165699-47165997 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 271-434 |
| Cow position: | chr21:2178484-2178320 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 296-533 |
| Cow position: | chr21:20315809-20316050 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 297-526 |
| Cow position: | chr21:19552741-19552969 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 298-540 |
| Cow position: | chr21:35600558-35600810 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 300-435 |
| Cow position: | chr21:30838757-30838624 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 301-430 |
| Cow position: | chr21:15933541-15933674 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 301-540 |
| Cow position: | chr21:32892960-32892709 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 306-526 |
| Cow position: | chr21:2529321-2529094 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 313-536 |
| Cow position: | chr21:15319772-15319540 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 321-468 |
| Cow position: | chr21:2138604-2138453 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 83 |
Show alignments to all cow chromosomes.