Cow genome map

Conread name: Ss1.1-rcbe05_f3.5

Conread position: 209-397
Cow position: chr24:15666757-15666557 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 162

Conread position: 209-422
Cow position: chr24:16207513-16207295 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 16

Conread position: 212-430
Cow position: chr24:38819354-38819575 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 162

Conread position: 212-538
Cow position: chr24:37856687-37856338 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 170

Conread position: 212-539
Cow position: chr24:5768084-5767763 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 32

Conread position: 214-433
Cow position: chr24:5616106-5616331 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 30

Conread position: 214-437
Cow position: chr24:32985888-32985677 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 59

Conread position: 215-433
Cow position: chr24:29071418-29071190 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 82, 26

Conread position: 215-433
Cow position: chr24:39769842-39769614 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 13

Conread position: 215-433
Cow position: chr24:42852493-42852703 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 39

Conread position: 215-436
Cow position: chr24:20749236-20749468 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 53

Conread position: 215-436
Cow position: chr24:24862166-24862395 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 215-443
Cow position: chr24:24799508-24799267 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 39

Conread position: 215-446
Cow position: chr24:17925161-17924915 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 178

Conread position: 215-534
Cow position: chr24:31231144-31230809 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 10

Conread position: 215-539
Cow position: chr24:5891801-5891459 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 61

Conread position: 215-539
Cow position: chr24:18712953-18713283 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 41

Conread position: 215-540
Cow position: chr24:23715876-23715545 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 24

Conread position: 216-395
Cow position: chr24:21264846-21264664 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 69, 116

Conread position: 216-398
Cow position: chr24:14698749-14698572 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 40

Conread position: 216-416
Cow position: chr24:4397718-4397507 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 165

Conread position: 216-416
Cow position: chr24:29043816-29044028 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 216-417
Cow position: chr24:25607815-25608018 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 64

Conread position: 216-417
Cow position: chr24:43883136-43883343 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 45

Conread position: 216-426
Cow position: chr24:29200204-29199992 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 12

Conread position: 216-430
Cow position: chr24:23492112-23492337 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 39

Conread position: 216-431
Cow position: chr24:37514494-37514269 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 62

Conread position: 216-432
Cow position: chr24:23807836-23808044 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 46, 38

Conread position: 216-432
Cow position: chr24:24068806-24068592 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 18

Conread position: 216-433
Cow position: chr24:16625841-16625616 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 134

Conread position: 216-433
Cow position: chr24:20289529-20289302 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 27

Conread position: 216-433
Cow position: chr24:23579723-23579498 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 136

Conread position: 216-433
Cow position: chr24:31117169-31117391 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 40

Conread position: 216-433
Cow position: chr24:35638675-35638454 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 87

Conread position: 216-433
Cow position: chr24:38884785-38884563 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 29

Conread position: 216-433
Cow position: chr24:44875537-44875317 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 12

Conread position: 216-434
Cow position: chr24:16564295-16564526 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 33

Conread position: 216-435
Cow position: chr24:38444520-38444747 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 73, 214

Conread position: 216-436
Cow position: chr24:16652330-16652561 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 216-436
Cow position: chr24:22912657-22912885 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 39

Conread position: 216-436
Cow position: chr24:25894497-25894729 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 40

Conread position: 216-436
Cow position: chr24:34197482-34197711 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 12

Conread position: 216-436
Cow position: chr24:34219941-34219714 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 20

Conread position: 216-436
Cow position: chr24:37230055-37230285 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 216-437
Cow position: chr24:23161524-23161744 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 129, 44

Conread position: 216-437
Cow position: chr24:23988210-23988442 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 38

Conread position: 216-442
Cow position: chr24:29369599-29369364 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 153

Conread position: 216-464
Cow position: chr24:6237204-6237452 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 19

Conread position: 216-486
Cow position: chr24:16297231-16296944 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 74, 18

Conread position: 216-534
Cow position: chr24:18846666-18847004 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 190

Conread position: 216-538
Cow position: chr24:3907858-3907541 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 43

Conread position: 216-538
Cow position: chr24:32087499-32087172 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 39

Conread position: 216-539
Cow position: chr24:19074062-19074392 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 40

Conread position: 216-539
Cow position: chr24:23205595-23205273 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 217, 49

Conread position: 216-539
Cow position: chr24:24614691-24615021 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 165

Conread position: 216-539
Cow position: chr24:24626688-24626345 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 170

Conread position: 216-540
Cow position: chr24:3224034-3224365 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 15

Conread position: 216-540
Cow position: chr24:15416425-15416077 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 12

Conread position: 216-540
Cow position: chr24:33518330-33517992 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 38

Conread position: 216-540
Cow position: chr24:38263949-38264293 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 73, 12

Conread position: 217-368
Cow position: chr24:25087778-25087941 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 217-442
Cow position: chr24:43777854-43778090 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 157

Conread position: 217-490
Cow position: chr24:16631483-16631766 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 157

Conread position: 217-534
Cow position: chr24:29390764-29390430 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 19

Conread position: 217-538
Cow position: chr24:24123745-24123424 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 38

Conread position: 218-427
Cow position: chr24:25265335-25265551 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 136

Conread position: 218-538
Cow position: chr24:248823-249133 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 212
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 37

Conread position: 218-540
Cow position: chr24:23140329-23140005 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 147

Conread position: 219-437
Cow position: chr24:9762135-9761916 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 124

Conread position: 220-433
Cow position: chr24:18914209-18914432 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 34

Conread position: 220-540
Cow position: chr24:26555494-26555837 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 191

Conread position: 220-540
Cow position: chr24:33010444-33010122 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 35

Conread position: 220-540
Cow position: chr24:42959258-42959594 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 47

Conread position: 222-422
Cow position: chr24:41439088-41439286 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 20

Conread position: 224-436
Cow position: chr24:37716031-37715812 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 33

Conread position: 224-540
Cow position: chr24:37434230-37433898 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 13

Conread position: 225-432
Cow position: chr24:12193791-12193574 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 30

Conread position: 226-436
Cow position: chr24:16303270-16303048 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 229-539
Cow position: chr24:27892080-27891756 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 63, 27

Conread position: 230-432
Cow position: chr24:44540999-44541195 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 150, 55

Conread position: 240-436
Cow position: chr24:37887655-37887852 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 14

Conread position: 246-540
Cow position: chr24:28910794-28911095 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 199

Conread position: 248-515
Cow position: chr24:20326521-20326796 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 16

Conread position: 248-526
Cow position: chr24:17633350-17633641 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 110

Conread position: 300-528
Cow position: chr24:32230034-32229794 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 178

Conread position: 301-430
Cow position: chr24:36862871-36863003 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 301-432
Cow position: chr24:42676103-42676234 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 64

Conread position: 301-436
Cow position: chr24:19907437-19907573 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 309-436
Cow position: chr24:39404234-39404361 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 48

Show alignments to all cow chromosomes.