Cow genome map

Conread name: Ss1.1-rcbe05_f3.5

Conread position: 208-536
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 59

Conread position: 209-435
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 46

Conread position: 211-436
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 51

Conread position: 212-527
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 140

Conread position: 214-538
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 78, 214

Conread position: 215-410
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 63, 34

Conread position: 215-425
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 133

Conread position: 215-432
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 34

Conread position: 215-432
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 93

Conread position: 215-436
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 215-436
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 167

Conread position: 215-436
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 74, 188

Conread position: 215-438
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 73, 29

Conread position: 215-538
Cow position:
Alignm length: 351
Alignm identity: 240
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 40

Conread position: 215-540
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 73, 262

Conread position: 215-540
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 10

Conread position: 215-540
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 45

Conread position: 215-540
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 13

Conread position: 215-540
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 40

Conread position: 215-540
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 74, 40

Conread position: 216-384
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 63

Conread position: 216-393
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 134

Conread position: 216-395
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 17

Conread position: 216-398
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 84

Conread position: 216-410
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 216-416
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 39

Conread position: 216-417
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 216-418
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 14

Conread position: 216-418
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 198

Conread position: 216-425
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 156

Conread position: 216-431
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 165

Conread position: 216-431
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 25

Conread position: 216-431
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 38

Conread position: 216-432
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 105

Conread position: 216-432
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 117

Conread position: 216-432
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 173

Conread position: 216-433
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 30

Conread position: 216-433
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 39

Conread position: 216-433
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 216-433
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 57

Conread position: 216-433
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 12

Conread position: 216-433
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 33

Conread position: 216-434
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 184

Conread position: 216-434
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 73, 143

Conread position: 216-436
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 221

Conread position: 216-436
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 216-436
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 76, 33

Conread position: 216-436
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 160

Conread position: 216-437
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 38

Conread position: 216-440
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 76

Conread position: 216-442
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 73, 58

Conread position: 216-442
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 38

Conread position: 216-520
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 73, 39

Conread position: 216-533
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 222, 71

Conread position: 216-537
Cow position:
Alignm length: 335
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 214

Conread position: 216-539
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 148

Conread position: 216-540
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 28

Conread position: 216-540
Cow position:
Alignm length: 341
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 216-540
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 62

Conread position: 216-540
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 15

Conread position: 216-540
Cow position:
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 216-540
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 260

Conread position: 216-540
Cow position:
Alignm length: 340
Alignm identity: 229
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 82

Conread position: 216-540
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 32

Conread position: 216-540
Cow position:
Alignm length: 338
Alignm identity: 221
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 73, 301

Conread position: 216-540
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 38

Conread position: 216-540
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 46

Conread position: 216-540
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 72, 36

Conread position: 216-540
Cow position:
Alignm length: 353
Alignm identity: 240
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 40

Conread position: 216-540
Cow position:
Alignm length: 336
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 116

Conread position: 216-540
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 55

Conread position: 216-540
Cow position:
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 176

Conread position: 216-540
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 40

Conread position: 216-540
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 36

Conread position: 217-433
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 46

Conread position: 217-436
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 165

Conread position: 217-436
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 38

Conread position: 217-523
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 221

Conread position: 217-535
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 71, 124

Conread position: 217-539
Cow position:
Alignm length: 346
Alignm identity: 228
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 270

Conread position: 217-540
Cow position:
Alignm length: 342
Alignm identity: 229
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 89

Conread position: 218-433
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 84

Conread position: 218-433
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 13, 38

Conread position: 218-436
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 37

Conread position: 218-436
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 123, 36

Conread position: 218-440
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 29

Conread position: 218-444
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 74, 56

Conread position: 218-525
Cow position:
Alignm length: 317
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 162

Conread position: 219-429
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 216

Conread position: 219-436
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 150

Conread position: 219-540
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 47

Conread position: 219-540
Cow position:
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 33

Conread position: 220-436
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 15

Conread position: 220-540
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 64, 110

Conread position: 220-540
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 39

Conread position: 221-433
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 33

Conread position: 221-434
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 27

Conread position: 222-534
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 48

Conread position: 223-536
Cow position:
Alignm length: 343
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 335

Conread position: 224-417
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 30

Conread position: 224-433
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 105

Conread position: 224-529
Cow position:
Alignm length: 322
Alignm identity: 220
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 122

Conread position: 225-436
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 9

Conread position: 226-442
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 226-539
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 226-539
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 107

Conread position: 226-539
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 44

Conread position: 227-433
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 14

Conread position: 229-540
Cow position:
Alignm length: 334
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 179

Conread position: 231-436
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 24

Conread position: 231-540
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 98

Conread position: 232-532
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 271

Conread position: 234-436
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 140

Conread position: 234-437
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 10

Conread position: 234-540
Cow position:
Alignm length: 326
Alignm identity: 217
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 52, 166

Conread position: 237-425
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 239-436
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 15

Conread position: 240-433
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 241-417
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 21

Conread position: 244-521
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 180

Conread position: 247-427
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 8

Conread position: 250-534
Cow position:
Alignm length: 304
Alignm identity: 205
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 136

Conread position: 261-433
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 103

Conread position: 267-540
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 58

Conread position: 272-430
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 289-538
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 5

Conread position: 294-431
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 297-444
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 297-465
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 157

Conread position: 300-433
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 300-458
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 300-494
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 69

Conread position: 300-520
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 182

Conread position: 300-538
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 150

Conread position: 300-540
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 184

Conread position: 302-431
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 303-432
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 303-540
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 212

Conread position: 309-433
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 115

Conread position: 334-436
Cow position:
Alignm length: 103
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 334-540
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 339-540
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 17

Conread position: 342-540
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 121, 64

Show alignments to all cow chromosomes.