Cow genome map


           Conread name:
           Ss1.1-rcbe05_f3.5
        

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 60
               

               Conread position:
               5-214
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               148, 19
               

               Conread position:
               215-433
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               215-433
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               215-433
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               215-436
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               45, 110
               

               Conread position:
               215-439
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               215-537
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               215-540
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               215-540
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 147
               

               Conread position:
               216-397
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               216-409
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               216-411
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               216-417
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               216-432
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               216-433
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               216-434
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               216-434
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 167
               

               Conread position:
               216-434
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               127, 12
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 163
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 38
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 25
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               216-446
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               216-455
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               216-461
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               216-468
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               216-521
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               216-523
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               216-524
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 279
               

               Conread position:
               216-526
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               74, 111
               

               Conread position:
               216-533
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 261
               

               Conread position:
               216-535
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               216-537
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               216-538
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               216-538
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 105
               

               Conread position:
               216-539
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               216-539
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               73, 165
               

               Conread position:
               216-539
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               216-539
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               76, 205
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               221, 55
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 76
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               217-433
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               217-436
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               217-539
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               217-540
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               218-540
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               219-398
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               219-429
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               219-433
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               219-433
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               220-529
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 257
               

               Conread position:
               220-533
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 305
               

               Conread position:
               223-431
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               223-436
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               223-537
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               68, 131
               

               Conread position:
               225-408
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               226-539
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               219, 78
               

               Conread position:
               229-398
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               230-432
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               232-436
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               57, 199
               

               Conread position:
               233-436
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               235-433
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               241-442
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               241-538
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               247-435
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 139
               

               Conread position:
               257-444
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               260-540
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               262-412
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               266-529
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               289-538
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               291-436
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               294-433
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 94
               

               Conread position:
               296-538
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               141, 170
               

               Conread position:
               297-526
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 197
               

               Conread position:
               300-433
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               300-436
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               300-437
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               300-446
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               301-537
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               303-444
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               303-540
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               318-536
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               126, 26
               
Show alignments to all cow chromosomes.