Cow genome map

Conread name: Ss1.1-rcbe05_f3.5

Conread position: 199-399
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 20

Conread position: 208-430
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 43

Conread position: 211-539
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 18

Conread position: 212-442
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 53

Conread position: 214-354
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 214-429
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 41

Conread position: 215-434
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 13

Conread position: 215-434
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 23

Conread position: 215-443
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 23

Conread position: 215-446
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 74, 23

Conread position: 215-536
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 74, 40

Conread position: 216-397
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 25

Conread position: 216-397
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 216-427
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 22

Conread position: 216-427
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 49

Conread position: 216-429
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 70, 168

Conread position: 216-431
Cow position:
Alignm length: 222
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 146

Conread position: 216-431
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 73, 54

Conread position: 216-432
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 160

Conread position: 216-433
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 60

Conread position: 216-433
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 38

Conread position: 216-434
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 164

Conread position: 216-436
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 49, 39

Conread position: 216-436
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 39

Conread position: 216-436
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 216-436
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 216-436
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 125

Conread position: 216-442
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 40

Conread position: 216-449
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 134

Conread position: 216-458
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 72, 12

Conread position: 216-462
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 164

Conread position: 216-517
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 55

Conread position: 216-520
Cow position:
Alignm length: 315
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 52

Conread position: 216-520
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 53

Conread position: 216-536
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 69, 329

Conread position: 216-539
Cow position:
Alignm length: 338
Alignm identity: 220
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 124

Conread position: 216-540
Cow position:
Alignm length: 346
Alignm identity: 236
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 103

Conread position: 216-540
Cow position:
Alignm length: 346
Alignm identity: 238
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 37, 150

Conread position: 216-540
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 73, 19

Conread position: 216-540
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 197

Conread position: 216-540
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 65

Conread position: 217-410
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 11

Conread position: 217-430
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 217-527
Cow position:
Alignm length: 324
Alignm identity: 216
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 116

Conread position: 218-436
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 218-465
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 36

Conread position: 218-540
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 71, 14

Conread position: 218-540
Cow position:
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 19

Conread position: 219-432
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 220-415
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 131

Conread position: 220-539
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 84

Conread position: 222-419
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 33

Conread position: 222-439
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 49

Conread position: 225-433
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 225-442
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 30

Conread position: 226-540
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 39

Conread position: 234-518
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 10

Conread position: 237-540
Cow position:
Alignm length: 324
Alignm identity: 214
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 150

Conread position: 240-391
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 34

Conread position: 240-431
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 101

Conread position: 241-415
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 135

Conread position: 241-433
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 13

Conread position: 241-540
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 14

Conread position: 244-540
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 245-540
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 66

Conread position: 250-540
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 271

Conread position: 256-540
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 271

Conread position: 264-539
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 89

Conread position: 294-536
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 6

Conread position: 296-436
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 297-437
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 300-433
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 31

Conread position: 300-441
Cow position:
Alignm length: 143
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 300-537
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 169

Conread position: 304-430
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 75

Conread position: 304-539
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 56

Conread position: 309-423
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 86

Conread position: 310-539
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.