Cow genome map
| Conread name: | Ss1.1-rcbe05_f3.5 |
| Conread position: | 203-395 |
| Cow position: | chr4:48137578-48137778 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 194 |
| Conread position: | 214-433 |
| Cow position: | chr4:11150068-11150297 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 78, 217 |
| Conread position: | 215-398 |
| Cow position: | chr4:52960085-52959895 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 164 |
| Conread position: | 215-421 |
| Cow position: | chr4:21157137-21156921 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 215-432 |
| Cow position: | chr4:19203373-19203587 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 215-432 |
| Cow position: | chr4:32001451-32001672 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 215-433 |
| Cow position: | chr4:59974833-59975057 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 215-435 |
| Cow position: | chr4:49611741-49611965 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 168 |
| Conread position: | 215-436 |
| Cow position: | chr4:38845277-38845509 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 73, 205 |
| Conread position: | 215-537 |
| Cow position: | chr4:25956128-25956439 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 215-539 |
| Cow position: | chr4:5238650-5238989 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 102 |
| Conread position: | 215-539 |
| Cow position: | chr4:37040190-37040530 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 151 |
| Conread position: | 215-540 |
| Cow position: | chr4:23823732-23823399 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 215-540 |
| Cow position: | chr4:37947211-37946867 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 77, 264 |
| Conread position: | 216-370 |
| Cow position: | chr4:26704494-26704328 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-382 |
| Cow position: | chr4:52253140-52253304 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 216-395 |
| Cow position: | chr4:35316098-35315909 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 216-397 |
| Cow position: | chr4:23311583-23311396 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 90 |
| Conread position: | 216-398 |
| Cow position: | chr4:49667893-49667702 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 216-401 |
| Cow position: | chr4:23712093-23712291 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-410 |
| Cow position: | chr4:14187252-14187457 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 216-410 |
| Cow position: | chr4:46458009-46458204 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 133 |
| Conread position: | 216-411 |
| Cow position: | chr4:7058207-7058003 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 216-417 |
| Cow position: | chr4:14384041-14383832 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 216-423 |
| Cow position: | chr4:54127380-54127585 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 133 |
| Conread position: | 216-425 |
| Cow position: | chr4:8528302-8528092 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 129, 79 |
| Conread position: | 216-425 |
| Cow position: | chr4:22877765-22877543 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-425 |
| Cow position: | chr4:30997635-30997856 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 216-427 |
| Cow position: | chr4:52970065-52969842 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 216-427 |
| Cow position: | chr4:66183933-66183711 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 170 |
| Conread position: | 216-429 |
| Cow position: | chr4:34617875-34617654 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 216-429 |
| Cow position: | chr4:49929760-49929552 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 216-430 |
| Cow position: | chr4:34347361-34347135 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 194 |
| Conread position: | 216-430 |
| Cow position: | chr4:41897037-41896814 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-430 |
| Cow position: | chr4:49852156-49851942 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 136 |
| Conread position: | 216-432 |
| Cow position: | chr4:14402621-14402393 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 174 |
| Conread position: | 216-432 |
| Cow position: | chr4:26555640-26555863 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 128 |
| Conread position: | 216-432 |
| Cow position: | chr4:39914572-39914803 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 216-432 |
| Cow position: | chr4:43549221-43548996 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 216-432 |
| Cow position: | chr4:45994333-45994554 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 216-432 |
| Cow position: | chr4:46359550-46359771 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 216-433 |
| Cow position: | chr4:33196513-33196287 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 72, 165 |
| Conread position: | 216-433 |
| Cow position: | chr4:43233620-43233391 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 216-433 |
| Cow position: | chr4:47978648-47978872 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 216-433 |
| Cow position: | chr4:53665368-53665597 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-433 |
| Cow position: | chr4:56812387-56812165 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 216-433 |
| Cow position: | chr4:64071523-64071294 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 176 |
| Conread position: | 216-434 |
| Cow position: | chr4:60009026-60008792 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 216-434 |
| Cow position: | chr4:68941772-68941545 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 216-435 |
| Cow position: | chr4:8120487-8120256 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-435 |
| Cow position: | chr4:40958303-40958515 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 216-435 |
| Cow position: | chr4:56303679-56303900 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 133 |
| Conread position: | 216-436 |
| Cow position: | chr4:1736968-1737198 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 73, 169 |
| Conread position: | 216-436 |
| Cow position: | chr4:1760534-1760304 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 73, 169 |
| Conread position: | 216-436 |
| Cow position: | chr4:6628146-6628369 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 216-436 |
| Cow position: | chr4:11319312-11319540 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 162 |
| Conread position: | 216-436 |
| Cow position: | chr4:20615005-20614781 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 216-436 |
| Cow position: | chr4:21985577-21985806 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 168 |
| Conread position: | 216-436 |
| Cow position: | chr4:22391666-22391439 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 216-436 |
| Cow position: | chr4:22631903-22631685 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 93 |
| Conread position: | 216-436 |
| Cow position: | chr4:29186627-29186399 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 216-436 |
| Cow position: | chr4:37055067-37054842 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 216-436 |
| Cow position: | chr4:51425547-51425778 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 216-436 |
| Cow position: | chr4:52717476-52717264 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 216-436 |
| Cow position: | chr4:61174167-61174397 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 198 |
| Conread position: | 216-436 |
| Cow position: | chr4:68940433-68940202 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 68, 174 |
| Conread position: | 216-443 |
| Cow position: | chr4:11008723-11008493 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 216-443 |
| Cow position: | chr4:55126931-55127163 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 144 |
| Conread position: | 216-444 |
| Cow position: | chr4:34225085-34225317 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 216-444 |
| Cow position: | chr4:40436424-40436182 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 200 |
| Conread position: | 216-444 |
| Cow position: | chr4:54445889-54445649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-446 |
| Cow position: | chr4:6156238-6156469 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 216-451 |
| Cow position: | chr4:49032288-49032531 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 216-474 |
| Cow position: | chr4:49376959-49376691 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 216-474 |
| Cow position: | chr4:52713300-52713576 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 181 |
| Conread position: | 216-528 |
| Cow position: | chr4:32440826-32441141 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 50 |
| Conread position: | 216-534 |
| Cow position: | chr4:27723678-27723351 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 202 |
| Conread position: | 216-535 |
| Cow position: | chr4:38068311-38067996 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 216-536 |
| Cow position: | chr4:59837801-59838139 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 216-537 |
| Cow position: | chr4:36828873-36829203 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 68, 164 |
| Conread position: | 216-537 |
| Cow position: | chr4:42928427-42928763 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 216-539 |
| Cow position: | chr4:22696714-22696397 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 216-539 |
| Cow position: | chr4:32693447-32693124 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 115 |
| Conread position: | 216-539 |
| Cow position: | chr4:35121409-35121075 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 216-539 |
| Cow position: | chr4:39935344-39935672 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 216-540 |
| Cow position: | chr4:7907311-7907630 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 171 |
| Conread position: | 216-540 |
| Cow position: | chr4:8567672-8567337 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 263 |
| Conread position: | 216-540 |
| Cow position: | chr4:23769899-23770242 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-540 |
| Cow position: | chr4:44062227-44061878 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 274 |
| Conread position: | 216-540 |
| Cow position: | chr4:49908224-49907884 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 282 |
| Conread position: | 217-399 |
| Cow position: | chr4:53132197-53132021 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 217-405 |
| Cow position: | chr4:22211049-22211247 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 217-415 |
| Cow position: | chr4:44469496-44469290 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 176 |
| Conread position: | 217-416 |
| Cow position: | chr4:36273662-36273460 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 217-429 |
| Cow position: | chr4:46017263-46017041 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 217-433 |
| Cow position: | chr4:13207901-13208126 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 217-433 |
| Cow position: | chr4:27543143-27542916 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 217-529 |
| Cow position: | chr4:47488536-47488854 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 217-540 |
| Cow position: | chr4:16827884-16827565 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 218-368 |
| Cow position: | chr4:48417921-48417764 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 218-417 |
| Cow position: | chr4:993404-993194 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 186 |
| Conread position: | 218-433 |
| Cow position: | chr4:21140434-21140654 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 218-465 |
| Cow position: | chr4:25216281-25216023 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 218-540 |
| Cow position: | chr4:66460341-66460016 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 219-489 |
| Cow position: | chr4:52054120-52054384 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 220-436 |
| Cow position: | chr4:2649590-2649812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 220-436 |
| Cow position: | chr4:44039212-44039437 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 220-437 |
| Cow position: | chr4:47137351-47137577 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 220-538 |
| Cow position: | chr4:18760676-18761012 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 220-538 |
| Cow position: | chr4:33442909-33442583 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 221-532 |
| Cow position: | chr4:63972510-63972842 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 68, 305 |
| Conread position: | 222-461 |
| Cow position: | chr4:50874668-50874417 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 222-528 |
| Cow position: | chr4:2212054-2211741 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 222-540 |
| Cow position: | chr4:39227751-39228082 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 223-433 |
| Cow position: | chr4:66308848-66309059 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 223-457 |
| Cow position: | chr4:27167010-27167251 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 223-524 |
| Cow position: | chr4:60952495-60952192 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 169 |
| Conread position: | 223-538 |
| Cow position: | chr4:28778230-28778556 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 224-526 |
| Cow position: | chr4:22523247-22523555 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 156 |
| Conread position: | 224-536 |
| Cow position: | chr4:22075177-22075497 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 68, 198 |
| Conread position: | 225-433 |
| Cow position: | chr4:34475548-34475333 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 225-440 |
| Cow position: | chr4:34027992-34028212 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 226-436 |
| Cow position: | chr4:34117128-34116911 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 226-436 |
| Cow position: | chr4:40769818-40769599 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 227-481 |
| Cow position: | chr4:26923149-26922886 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 210 |
| Conread position: | 230-436 |
| Cow position: | chr4:53273740-53273530 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 230-539 |
| Cow position: | chr4:64016467-64016143 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 226 |
| Conread position: | 230-540 |
| Cow position: | chr4:31014397-31014077 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 112 |
| Conread position: | 232-401 |
| Cow position: | chr4:24661844-24661670 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 237-540 |
| Cow position: | chr4:22646458-22646144 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 240-442 |
| Cow position: | chr4:67521883-67521689 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 6 |
| Conread position: | 240-536 |
| Cow position: | chr4:23888545-23888228 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 241-436 |
| Cow position: | chr4:42434992-42434793 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 241-437 |
| Cow position: | chr4:51484841-51484641 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 48, 167 |
| Conread position: | 243-442 |
| Cow position: | chr4:56172159-56172368 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 258-540 |
| Cow position: | chr4:58161214-58160915 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 32, 230 |
| Conread position: | 260-438 |
| Cow position: | chr4:32301506-32301693 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 172 |
| Conread position: | 262-436 |
| Cow position: | chr4:50676867-50676687 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 265-441 |
| Cow position: | chr4:36033956-36034144 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 270-436 |
| Cow position: | chr4:25572034-25572209 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 273-538 |
| Cow position: | chr4:43070467-43070742 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 244 |
| Conread position: | 289-539 |
| Cow position: | chr4:1984815-1985072 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 297-433 |
| Cow position: | chr4:65417851-65417718 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 297-436 |
| Cow position: | chr4:871383-871521 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 297-442 |
| Cow position: | chr4:56670458-56670606 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 298-433 |
| Cow position: | chr4:10042369-10042506 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 300-433 |
| Cow position: | chr4:1389354-1389487 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 300-540 |
| Cow position: | chr4:22601060-22600808 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 300-540 |
| Cow position: | chr4:22833220-22832970 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 300-540 |
| Cow position: | chr4:41168354-41168604 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 301-515 |
| Cow position: | chr4:22853514-22853720 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 301-526 |
| Cow position: | chr4:22493596-22493827 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 302-539 |
| Cow position: | chr4:11994318-11994554 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 303-540 |
| Cow position: | chr4:22360284-22360045 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 304-535 |
| Cow position: | chr4:19833180-19833403 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 313-540 |
| Cow position: | chr4:23953866-23953628 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.