Cow genome map
| Conread name: | Ss1.1-rcbe05_f3.5 |
| Conread position: | 42-215 |
| Cow position: | chr5:7657637-7657809 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 155 |
| Conread position: | 79-217 |
| Cow position: | chr5:49633516-49633656 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 211-540 |
| Cow position: | chr5:52907947-52908295 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 212-540 |
| Cow position: | chr5:32940806-32941155 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 214-415 |
| Cow position: | chr5:3446495-3446287 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 214-540 |
| Cow position: | chr5:62341618-62341959 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 49 |
| Conread position: | 215-404 |
| Cow position: | chr5:56656926-56656726 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 215-433 |
| Cow position: | chr5:6834064-6833838 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 215-434 |
| Cow position: | chr5:67117683-67117912 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 215-539 |
| Cow position: | chr5:48113080-48113418 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 216-389 |
| Cow position: | chr5:53492894-53493066 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 126, 38 |
| Conread position: | 216-391 |
| Cow position: | chr5:51293021-51292836 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 216-397 |
| Cow position: | chr5:29771228-29771417 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 216-410 |
| Cow position: | chr5:40050239-40050037 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 48 |
| Conread position: | 216-420 |
| Cow position: | chr5:35320288-35320076 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 161 |
| Conread position: | 216-421 |
| Cow position: | chr5:48247956-48248166 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 216-427 |
| Cow position: | chr5:47087354-47087564 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 216-427 |
| Cow position: | chr5:49691993-49692211 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 115 |
| Conread position: | 216-429 |
| Cow position: | chr5:35964676-35964899 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 216-432 |
| Cow position: | chr5:19859931-19859709 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 76, 163 |
| Conread position: | 216-432 |
| Cow position: | chr5:48244793-48245019 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 216-433 |
| Cow position: | chr5:3079966-3080182 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 216-433 |
| Cow position: | chr5:22133044-22133268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 216-433 |
| Cow position: | chr5:40614297-40614069 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 216-433 |
| Cow position: | chr5:42344937-42344713 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 216-433 |
| Cow position: | chr5:45606803-45607019 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 216-433 |
| Cow position: | chr5:46865396-46865175 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 216-433 |
| Cow position: | chr5:69879227-69879456 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 216-433 |
| Cow position: | chr5:74462319-74462100 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 216-434 |
| Cow position: | chr5:24539236-24539009 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 216-434 |
| Cow position: | chr5:39750682-39750913 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 216-436 |
| Cow position: | chr5:21592889-21593113 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 216-436 |
| Cow position: | chr5:27100992-27101225 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-436 |
| Cow position: | chr5:28699228-28698996 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 216-436 |
| Cow position: | chr5:44437575-44437347 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-436 |
| Cow position: | chr5:65791370-65791141 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 216-439 |
| Cow position: | chr5:40673096-40673326 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 216-442 |
| Cow position: | chr5:33150413-33150646 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 216-442 |
| Cow position: | chr5:49098904-49099136 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 216-446 |
| Cow position: | chr5:51842781-51843017 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 216-453 |
| Cow position: | chr5:46317699-46317447 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 216-456 |
| Cow position: | chr5:31781955-31782212 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 216-518 |
| Cow position: | chr5:28677732-28677427 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 72, 155 |
| Conread position: | 216-520 |
| Cow position: | chr5:51052529-51052819 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 30 |
| Conread position: | 216-526 |
| Cow position: | chr5:5881036-5880706 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-526 |
| Cow position: | chr5:70904371-70904058 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 73, 116 |
| Conread position: | 216-528 |
| Cow position: | chr5:28528629-28528324 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 228, 45 |
| Conread position: | 216-535 |
| Cow position: | chr5:45602043-45601707 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 216-537 |
| Cow position: | chr5:17505813-17506131 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 216-538 |
| Cow position: | chr5:20383360-20383701 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 73, 296 |
| Conread position: | 216-538 |
| Cow position: | chr5:41517571-41517236 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 187 |
| Conread position: | 216-539 |
| Cow position: | chr5:33063650-33063989 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 216-539 |
| Cow position: | chr5:35339157-35339489 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 216-539 |
| Cow position: | chr5:74160122-74160462 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 216-540 |
| Cow position: | chr5:4084368-4084026 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 216-540 |
| Cow position: | chr5:4378720-4378396 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 216-540 |
| Cow position: | chr5:13688012-13688347 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 216-540 |
| Cow position: | chr5:14668636-14668975 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 216-540 |
| Cow position: | chr5:16959739-16959405 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 216-540 |
| Cow position: | chr5:21167822-21167487 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 151 |
| Conread position: | 216-540 |
| Cow position: | chr5:27899401-27899067 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 154 |
| Conread position: | 216-540 |
| Cow position: | chr5:31008284-31008617 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 216-540 |
| Cow position: | chr5:32260754-32260423 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 216-540 |
| Cow position: | chr5:32978703-32978358 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 171 |
| Conread position: | 216-540 |
| Cow position: | chr5:44342501-44342833 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 216-540 |
| Cow position: | chr5:62268294-62268638 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 216-540 |
| Cow position: | chr5:70631266-70630923 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 216-540 |
| Cow position: | chr5:70959785-70959452 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 217-398 |
| Cow position: | chr5:29563932-29564121 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 169 |
| Conread position: | 217-400 |
| Cow position: | chr5:47725153-47725340 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 217-427 |
| Cow position: | chr5:35215487-35215276 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 71, 131 |
| Conread position: | 217-433 |
| Cow position: | chr5:70848113-70848349 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 217-434 |
| Cow position: | chr5:28931085-28931312 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 217-436 |
| Cow position: | chr5:33251057-33250827 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 145 |
| Conread position: | 217-436 |
| Cow position: | chr5:70771870-70772105 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 217-441 |
| Cow position: | chr5:18550802-18551021 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 217-443 |
| Cow position: | chr5:22756741-22756975 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 217-526 |
| Cow position: | chr5:54329051-54329359 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 217-533 |
| Cow position: | chr5:41201355-41201038 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 217-538 |
| Cow position: | chr5:37460318-37460652 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 217-540 |
| Cow position: | chr5:22890383-22890045 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 72, 275 |
| Conread position: | 217-540 |
| Cow position: | chr5:48484069-48484399 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 146 |
| Conread position: | 217-540 |
| Cow position: | chr5:51877062-51877390 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 218-442 |
| Cow position: | chr5:16668086-16667853 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 218-539 |
| Cow position: | chr5:53360534-53360206 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 219-407 |
| Cow position: | chr5:74516927-74516740 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 219-413 |
| Cow position: | chr5:23478680-23478479 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 219-436 |
| Cow position: | chr5:43451569-43451791 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 219-436 |
| Cow position: | chr5:47244058-47244282 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 219-438 |
| Cow position: | chr5:15617789-15618016 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 219-498 |
| Cow position: | chr5:24912206-24912491 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 247 |
| Conread position: | 220-401 |
| Cow position: | chr5:62178226-62178417 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 188 |
| Conread position: | 220-425 |
| Cow position: | chr5:33189943-33190160 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 220-430 |
| Cow position: | chr5:5538049-5537831 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 220-436 |
| Cow position: | chr5:33175768-33175985 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 220-436 |
| Cow position: | chr5:62272337-62272116 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 160 |
| Conread position: | 220-442 |
| Cow position: | chr5:50648486-50648703 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 221-540 |
| Cow position: | chr5:14906091-14905755 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 221-540 |
| Cow position: | chr5:61995314-61995650 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 223-458 |
| Cow position: | chr5:35444582-35444825 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 224-436 |
| Cow position: | chr5:61101964-61102191 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 224-538 |
| Cow position: | chr5:5526866-5526526 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 225-436 |
| Cow position: | chr5:8203219-8203436 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 225-436 |
| Cow position: | chr5:15122545-15122331 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 225-540 |
| Cow position: | chr5:51967307-51966989 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 146 |
| Conread position: | 227-432 |
| Cow position: | chr5:57933632-57933426 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 227-444 |
| Cow position: | chr5:45610827-45610599 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 227-525 |
| Cow position: | chr5:64841721-64841415 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 228-427 |
| Cow position: | chr5:32643388-32643592 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 230-432 |
| Cow position: | chr5:70910748-70910536 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 165 |
| Conread position: | 231-433 |
| Cow position: | chr5:74234543-74234332 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 231-439 |
| Cow position: | chr5:62143094-62142883 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 231-520 |
| Cow position: | chr5:40260926-40260626 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 233-433 |
| Cow position: | chr5:6147736-6147525 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 234-442 |
| Cow position: | chr5:46224130-46223913 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 235-433 |
| Cow position: | chr5:74432440-74432651 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 235-458 |
| Cow position: | chr5:60275536-60275769 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 237-431 |
| Cow position: | chr5:23500969-23500767 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 237-436 |
| Cow position: | chr5:4105279-4105490 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 241-540 |
| Cow position: | chr5:44366892-44367204 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 271 |
| Conread position: | 242-526 |
| Cow position: | chr5:60410807-60411094 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 5, 215 |
| Conread position: | 243-525 |
| Cow position: | chr5:58731843-58731567 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 244-442 |
| Cow position: | chr5:40509850-40509642 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 246-442 |
| Cow position: | chr5:53891897-53892096 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 246-442 |
| Cow position: | chr5:53895327-53895128 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 252-540 |
| Cow position: | chr5:66575030-66575343 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 174 |
| Conread position: | 256-537 |
| Cow position: | chr5:19269503-19269214 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 257-520 |
| Cow position: | chr5:64747695-64747418 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 260-429 |
| Cow position: | chr5:27534606-27534427 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 260-540 |
| Cow position: | chr5:68393116-68392816 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 264-437 |
| Cow position: | chr5:40649607-40649792 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 264-442 |
| Cow position: | chr5:62385020-62385209 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 298-432 |
| Cow position: | chr5:42910835-42910969 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 105, 111 |
| Conread position: | 298-536 |
| Cow position: | chr5:60710707-60710456 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 158 |
| Conread position: | 298-540 |
| Cow position: | chr5:20693414-20693174 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 162, 26 |
| Conread position: | 300-456 |
| Cow position: | chr5:70104220-70104376 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 138, 121 |
| Conread position: | 300-538 |
| Cow position: | chr5:62609007-62609256 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 181 |
| Conread position: | 300-540 |
| Cow position: | chr5:15624373-15624600 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 222, 39 |
| Conread position: | 300-540 |
| Cow position: | chr5:39755971-39755720 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 161 |
| Conread position: | 300-540 |
| Cow position: | chr5:74029752-74030007 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 301-436 |
| Cow position: | chr5:24527179-24527043 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 302-499 |
| Cow position: | chr5:39792133-39791927 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 182 |
| Conread position: | 304-540 |
| Cow position: | chr5:51192468-51192712 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 39, 174 |
| Conread position: | 316-533 |
| Cow position: | chr5:40155057-40155282 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 320-430 |
| Cow position: | chr5:70547401-70547291 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.