Cow genome map

Conread name: Ss1.1-rcbe05_f3.5

Conread position: 42-227
Cow position: chr6:35619922-35619736 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 11

Conread position: 212-523
Cow position: chr6:24089386-24089054 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 178

Conread position: 215-417
Cow position: chr6:61519167-61519379 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 171

Conread position: 215-423
Cow position: chr6:42693086-42693305 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 172

Conread position: 215-433
Cow position: chr6:7163372-7163608 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 215-433
Cow position: chr6:12977543-12977767 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 107

Conread position: 215-436
Cow position: chr6:41216118-41216351 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 215-437
Cow position: chr6:10337321-10337091 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 109

Conread position: 215-439
Cow position: chr6:14806171-14806400 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 73, 24

Conread position: 215-442
Cow position: chr6:20611063-20610821 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 166

Conread position: 215-539
Cow position: chr6:6817477-6817817 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 73, 60

Conread position: 215-539
Cow position: chr6:56862653-56862982 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 91

Conread position: 215-540
Cow position: chr6:32461843-32461499 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 230

Conread position: 215-540
Cow position: chr6:60936099-60936433 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 251

Conread position: 216-397
Cow position: chr6:5958291-5958106 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 9

Conread position: 216-402
Cow position: chr6:34924373-34924181 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 44

Conread position: 216-412
Cow position: chr6:23957423-23957617 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 216-416
Cow position: chr6:56925141-56925344 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 85

Conread position: 216-427
Cow position: chr6:37392989-37392770 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 83

Conread position: 216-429
Cow position: chr6:26010883-26010674 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 81

Conread position: 216-430
Cow position: chr6:22746381-22746602 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 14

Conread position: 216-432
Cow position: chr6:31227767-31227980 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 131, 40

Conread position: 216-432
Cow position: chr6:31256812-31257035 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 19

Conread position: 216-432
Cow position: chr6:41868090-41867870 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 14

Conread position: 216-432
Cow position: chr6:45661207-45661421 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 118, 73

Conread position: 216-432
Cow position: chr6:58731552-58731775 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 139

Conread position: 216-433
Cow position: chr6:7128140-7127918 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 24

Conread position: 216-433
Cow position: chr6:10426155-10426383 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 36

Conread position: 216-433
Cow position: chr6:36467015-36466784 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 18

Conread position: 216-433
Cow position: chr6:38778249-38778020 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 216-433
Cow position: chr6:51049653-51049883 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 216-433
Cow position: chr6:51370826-51371051 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 17

Conread position: 216-433
Cow position: chr6:57755897-57755670 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 147

Conread position: 216-434
Cow position: chr6:13583947-13584176 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 39

Conread position: 216-436
Cow position: chr6:16430698-16430466 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 0

Conread position: 216-436
Cow position: chr6:17284311-17284093 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 59

Conread position: 216-436
Cow position: chr6:36603893-36604120 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 116

Conread position: 216-436
Cow position: chr6:37762113-37762344 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 212

Conread position: 216-436
Cow position: chr6:43587142-43587372 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 126

Conread position: 216-442
Cow position: chr6:47441046-47440811 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 28

Conread position: 216-444
Cow position: chr6:19429190-19429428 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 216-444
Cow position: chr6:29772143-29772375 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 154

Conread position: 216-446
Cow position: chr6:29430709-29430939 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 13

Conread position: 216-452
Cow position: chr6:48107755-48107999 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 11

Conread position: 216-514
Cow position: chr6:57574283-57574588 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 137

Conread position: 216-517
Cow position: chr6:15968231-15967923 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 37

Conread position: 216-532
Cow position: chr6:33176874-33176553 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 39

Conread position: 216-535
Cow position: chr6:47378034-47378366 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 52

Conread position: 216-538
Cow position: chr6:7794738-7795077 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 125

Conread position: 216-538
Cow position: chr6:24044677-24044332 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 309

Conread position: 216-538
Cow position: chr6:37735510-37735842 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 14

Conread position: 216-538
Cow position: chr6:53100770-53101103 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 73, 122

Conread position: 216-540
Cow position: chr6:1908620-1908280 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 216-540
Cow position: chr6:66975075-66975424 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 150

Conread position: 217-458
Cow position: chr6:47457552-47457801 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 41

Conread position: 218-442
Cow position: chr6:41961239-41961006 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 219-416
Cow position: chr6:39096152-39095948 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 219-427
Cow position: chr6:41352626-41352408 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 35

Conread position: 219-484
Cow position: chr6:20029342-20029067 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 70, 36

Conread position: 220-418
Cow position: chr6:47540254-47540465 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 220-431
Cow position: chr6:9207558-9207337 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 34

Conread position: 220-436
Cow position: chr6:55573379-55573145 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 220-453
Cow position: chr6:47640072-47639826 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 220-534
Cow position: chr6:31436993-31437323 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 35

Conread position: 220-537
Cow position: chr6:17887154-17886823 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 258

Conread position: 221-437
Cow position: chr6:10052512-10052724 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 93

Conread position: 225-433
Cow position: chr6:16257595-16257815 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 187

Conread position: 225-452
Cow position: chr6:41317317-41317077 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 29

Conread position: 225-540
Cow position: chr6:18979583-18979910 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 157

Conread position: 226-436
Cow position: chr6:63102997-63103219 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 228-539
Cow position: chr6:67552205-67551876 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 50

Conread position: 230-433
Cow position: chr6:30928852-30928637 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 230-436
Cow position: chr6:6049891-6050103 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 155

Conread position: 230-452
Cow position: chr6:49168228-49168004 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 65

Conread position: 232-436
Cow position: chr6:61547748-61547536 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 233-539
Cow position: chr6:17692920-17692594 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 156

Conread position: 240-435
Cow position: chr6:33469733-33469939 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 102

Conread position: 240-442
Cow position: chr6:56502218-56502418 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 15

Conread position: 245-412
Cow position: chr6:47631760-47631939 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 77

Conread position: 245-449
Cow position: chr6:21694454-21694667 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 144

Conread position: 245-539
Cow position: chr6:47661468-47661779 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 43, 10

Conread position: 257-417
Cow position: chr6:21682253-21682419 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 123

Conread position: 257-433
Cow position: chr6:15386361-15386173 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 264-494
Cow position: chr6:49968510-49968759 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 219

Conread position: 265-536
Cow position: chr6:50647922-50648195 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 23

Conread position: 296-425
Cow position: chr6:39791648-39791777 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 7

Conread position: 296-456
Cow position: chr6:48249313-48249478 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 156

Conread position: 296-540
Cow position: chr6:16315687-16315934 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 5

Conread position: 300-437
Cow position: chr6:59450839-59450704 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 300-478
Cow position: chr6:62982742-62982921 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 144

Conread position: 300-516
Cow position: chr6:35746562-35746780 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 70

Conread position: 300-535
Cow position: chr6:31530838-31531088 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 190

Conread position: 300-540
Cow position: chr6:16278120-16278371 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 243

Conread position: 300-540
Cow position: chr6:59113783-59114034 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 101

Conread position: 301-540
Cow position: chr6:32467170-32466927 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 44

Conread position: 303-444
Cow position: chr6:19575232-19575088 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 310-540
Cow position: chr6:34693803-34694036 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 160

Conread position: 319-508
Cow position: chr6:50178055-50177867 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 19

Show alignments to all cow chromosomes.