Cow genome map


           Conread name:
           Ss1.1-rcbe05_f3.5
        

               Conread position:
               200-430
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 204
               

               Conread position:
               212-433
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               215-407
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               215-412
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               215-430
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               215-436
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               215-538
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               215-539
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               73, 150
               

               Conread position:
               215-540
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               215-540
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               70, 191
               

               Conread position:
               215-540
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               216-342
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               216-383
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               216-387
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               216-400
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               216-408
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               216-416
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 127
               

               Conread position:
               216-423
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 125
               

               Conread position:
               216-423
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               216-425
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               127, 57
               

               Conread position:
               216-431
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 136
               

               Conread position:
               216-432
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 163
               

               Conread position:
               216-432
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               72, 187
               

               Conread position:
               216-433
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               216-433
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 59
               

               Conread position:
               216-433
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               216-433
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               216-433
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               216-435
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               74, 45
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 215
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 61
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               216-436
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               127, 12
               

               Conread position:
               216-437
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 189
               

               Conread position:
               216-437
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 171
               

               Conread position:
               216-442
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 145
               

               Conread position:
               216-447
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               216-458
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               216-481
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               216-520
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               216-526
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               216-531
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               216-535
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               216-537
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               216-538
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 188
               

               Conread position:
               216-539
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 310
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               67, 164
               

               Conread position:
               216-540
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 150
               

               Conread position:
               217-406
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               217-437
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               217-526
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 148
               

               Conread position:
               218-368
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               218-399
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               218-432
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               218-472
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               219-425
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               219-436
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 191
               

               Conread position:
               219-540
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               73, 134
               

               Conread position:
               220-439
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               220-452
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               220-540
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               222-433
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               222-540
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 122
               

               Conread position:
               223-439
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               225-540
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 191
               

               Conread position:
               226-436
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               230-436
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               231-538
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 159
               

               Conread position:
               232-434
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               233-540
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               240-537
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               242-408
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 148
               

               Conread position:
               245-538
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               248-433
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               40, 91
               

               Conread position:
               260-436
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               263-529
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               269-429
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               271-442
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               289-431
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               297-539
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 100
               

               Conread position:
               300-430
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               300-433
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               301-472
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               301-539
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 137
               

               Conread position:
               302-437
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               302-539
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               39, 167
               

               Conread position:
               303-539
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               303-540
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               305-436
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               316-540
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               326-539
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 160
               
Show alignments to all cow chromosomes.