Cow genome map
| Conread name: | Ss1.1-rcbe22_g17.5 |
| Conread position: | 3-299 |
| Cow position: | chr12:1889718-1889411 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 212, 100 |
| Conread position: | 3-308 |
| Cow position: | chr12:33458007-33458301 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 114 |
| Conread position: | 4-207 |
| Cow position: | chr12:18964062-18963868 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 96, 9 |
| Conread position: | 5-220 |
| Cow position: | chr12:42233920-42234132 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 112, 68 |
| Conread position: | 5-228 |
| Cow position: | chr12:11836095-11836314 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 5-289 |
| Cow position: | chr12:1223479-1223208 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 198, 121 |
| Conread position: | 7-170 |
| Cow position: | chr12:40028891-40028730 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 7-288 |
| Cow position: | chr12:37728006-37728287 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 7-288 |
| Cow position: | chr12:37732918-37732638 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 7-301 |
| Cow position: | chr12:34161282-34161574 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 52 |
| Conread position: | 7-312 |
| Cow position: | chr12:23916709-23917020 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 217, 109 |
| Conread position: | 8-222 |
| Cow position: | chr12:37993856-37993657 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-224 |
| Cow position: | chr12:29969447-29969656 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-224 |
| Cow position: | chr12:35771152-35770944 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-278 |
| Cow position: | chr12:27365793-27366055 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 108 |
| Conread position: | 8-298 |
| Cow position: | chr12:47804021-47804306 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 117 |
| Conread position: | 8-303 |
| Cow position: | chr12:5714495-5714791 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 9-222 |
| Cow position: | chr12:4341871-4341669 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 10-252 |
| Cow position: | chr12:42181269-42181027 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 10-277 |
| Cow position: | chr12:16543707-16543450 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 126, 51 |
| Conread position: | 11-281 |
| Cow position: | chr12:12331632-12331377 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 11-316 |
| Cow position: | chr12:17110020-17109729 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 148, 67 |
| Conread position: | 11-350 |
| Cow position: | chr12:18769203-18768873 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 122, 113 |
| Conread position: | 12-197 |
| Cow position: | chr12:38484521-38484344 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 12-207 |
| Cow position: | chr12:8869006-8868822 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 12-217 |
| Cow position: | chr12:23855708-23855902 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 12-221 |
| Cow position: | chr12:44919905-44920104 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 12-222 |
| Cow position: | chr12:4866693-4866892 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 12-222 |
| Cow position: | chr12:5635576-5635378 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 12-222 |
| Cow position: | chr12:6410861-6410659 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 150, 26 |
| Conread position: | 12-222 |
| Cow position: | chr12:15699945-15700155 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 12-222 |
| Cow position: | chr12:25188055-25188263 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 12-222 |
| Cow position: | chr12:34473753-34473550 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 79 |
| Conread position: | 12-224 |
| Cow position: | chr12:27563506-27563300 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 12-225 |
| Cow position: | chr12:30662076-30661872 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 12-229 |
| Cow position: | chr12:12300792-12301000 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 12-252 |
| Cow position: | chr12:24152208-24152443 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 12-255 |
| Cow position: | chr12:19258150-19258383 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 12-269 |
| Cow position: | chr12:4596336-4596587 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 12-272 |
| Cow position: | chr12:28559167-28559425 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 205, 97 |
| Conread position: | 12-276 |
| Cow position: | chr12:31429699-31429446 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 12-281 |
| Cow position: | chr12:3623565-3623842 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 60 |
| Conread position: | 12-281 |
| Cow position: | chr12:30596340-30596601 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 12-293 |
| Cow position: | chr12:5899398-5899652 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 12-293 |
| Cow position: | chr12:17031486-17031772 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 203, 61 |
| Conread position: | 12-293 |
| Cow position: | chr12:25606573-25606851 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 123, 96 |
| Conread position: | 12-297 |
| Cow position: | chr12:37008833-37008542 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 212, 61 |
| Conread position: | 12-300 |
| Cow position: | chr12:24559228-24559509 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 16 |
| Conread position: | 12-301 |
| Cow position: | chr12:32413383-32413673 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 12-311 |
| Cow position: | chr12:40910418-40910104 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 157, 41 |
| Conread position: | 12-320 |
| Cow position: | chr12:10763135-10763440 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 13-170 |
| Cow position: | chr12:20326646-20326798 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 59 |
| Conread position: | 13-222 |
| Cow position: | chr12:6241184-6241394 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 13-222 |
| Cow position: | chr12:35368513-35368717 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 13-222 |
| Cow position: | chr12:44517864-44517663 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 13-223 |
| Cow position: | chr12:28582632-28582434 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 13-234 |
| Cow position: | chr12:18943785-18943573 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 13-252 |
| Cow position: | chr12:30590639-30590870 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 13-291 |
| Cow position: | chr12:1504895-1505158 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 13-292 |
| Cow position: | chr12:38774367-38774083 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 13-301 |
| Cow position: | chr12:22689616-22689887 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 13-314 |
| Cow position: | chr12:1333100-1333404 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 120, 101 |
| Conread position: | 13-360 |
| Cow position: | chr12:25192924-25193269 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 163, 25 |
| Conread position: | 14-278 |
| Cow position: | chr12:22515862-22515590 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 14-309 |
| Cow position: | chr12:34466134-34465839 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 15-207 |
| Cow position: | chr12:11056748-11056936 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 15-289 |
| Cow position: | chr12:44057384-44057657 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 96 |
| Conread position: | 15-293 |
| Cow position: | chr12:7996287-7996555 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 17-287 |
| Cow position: | chr12:48425587-48425848 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 18-220 |
| Cow position: | chr12:44595934-44595737 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 18-222 |
| Cow position: | chr12:33323618-33323420 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 189, 55 |
| Conread position: | 18-222 |
| Cow position: | chr12:42966875-42967069 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 18-223 |
| Cow position: | chr12:46120953-46120756 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 117, 51 |
| Conread position: | 18-252 |
| Cow position: | chr12:41159471-41159691 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 223, 6 |
| Conread position: | 18-272 |
| Cow position: | chr12:2711373-2711622 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 18-281 |
| Cow position: | chr12:41642310-41642564 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-292 |
| Cow position: | chr12:19715163-19714899 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 18-293 |
| Cow position: | chr12:30210359-30210633 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 118, 34 |
| Conread position: | 18-293 |
| Cow position: | chr12:30805731-30806016 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 18-301 |
| Cow position: | chr12:4162490-4162202 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 18-301 |
| Cow position: | chr12:30170545-30170823 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 175, 52 |
| Conread position: | 19-222 |
| Cow position: | chr12:48415637-48415441 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 19-223 |
| Cow position: | chr12:6210280-6210082 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 19-293 |
| Cow position: | chr12:27803174-27802896 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 203, 35 |
| Conread position: | 20-268 |
| Cow position: | chr12:27038877-27038623 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 138 |
| Conread position: | 20-277 |
| Cow position: | chr12:31517294-31517036 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 62 |
| Conread position: | 20-289 |
| Cow position: | chr12:1030857-1031123 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 204, 58 |
| Conread position: | 20-317 |
| Cow position: | chr12:7960703-7960402 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 20-318 |
| Cow position: | chr12:42918349-42918632 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 21-199 |
| Cow position: | chr12:25452568-25452395 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 21-296 |
| Cow position: | chr12:749248-749505 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 23-252 |
| Cow position: | chr12:21780046-21780265 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 23-317 |
| Cow position: | chr12:26750077-26749783 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 25-223 |
| Cow position: | chr12:31269034-31269229 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 29-299 |
| Cow position: | chr12:21922336-21922608 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 29-305 |
| Cow position: | chr12:29448533-29448803 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 31-301 |
| Cow position: | chr12:30414058-30413788 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 166, 44 |
| Conread position: | 32-247 |
| Cow position: | chr12:18523454-18523668 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 36-293 |
| Cow position: | chr12:27055500-27055747 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 36-301 |
| Cow position: | chr12:40931718-40931463 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 9 |
| Conread position: | 36-317 |
| Cow position: | chr12:31198659-31198935 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 89 |
| Conread position: | 37-291 |
| Cow position: | chr12:42285864-42286125 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 39-293 |
| Cow position: | chr12:5680578-5680828 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 39-299 |
| Cow position: | chr12:18103713-18103448 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 184, 43 |
| Conread position: | 40-292 |
| Cow position: | chr12:5658850-5658603 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 47-293 |
| Cow position: | chr12:42477918-42478154 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 54-278 |
| Cow position: | chr12:3615913-3616131 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 171, 24 |
| Conread position: | 61-292 |
| Cow position: | chr12:30064857-30065076 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 64-289 |
| Cow position: | chr12:47486752-47486974 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 70-224 |
| Cow position: | chr12:7854283-7854133 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 80-300 |
| Cow position: | chr12:9229564-9229346 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 155, 46 |
| Conread position: | 82-292 |
| Cow position: | chr12:3816423-3816630 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 93-290 |
| Cow position: | chr12:34242376-34242184 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 94-299 |
| Cow position: | chr12:44907967-44908163 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 113-293 |
| Cow position: | chr12:16850947-16850771 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 116-309 |
| Cow position: | chr12:36109291-36109100 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 117-296 |
| Cow position: | chr12:6666544-6666727 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 118-292 |
| Cow position: | chr12:25933656-25933824 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 118-309 |
| Cow position: | chr12:23734356-23734541 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 119-264 |
| Cow position: | chr12:6123966-6124104 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 122-293 |
| Cow position: | chr12:11520152-11520317 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 122-311 |
| Cow position: | chr12:39781364-39781178 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 125-298 |
| Cow position: | chr12:11081121-11080950 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 132-292 |
| Cow position: | chr12:38804604-38804440 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 36 |
| Conread position: | 134-297 |
| Cow position: | chr12:4801354-4801520 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 136-336 |
| Cow position: | chr12:16205714-16205913 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 138-311 |
| Cow position: | chr12:43671695-43671863 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 138-384 |
| Cow position: | chr12:33873387-33873145 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 150, 18 |
| Conread position: | 143-291 |
| Cow position: | chr12:24681816-24681961 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 175-301 |
| Cow position: | chr12:38096150-38096276 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 175-317 |
| Cow position: | chr12:38592749-38592892 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 63 |
Show alignments to all cow chromosomes.