Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 3-299
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 212, 100

Conread position: 3-308
Cow position:
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 114

Conread position: 4-207
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 9

Conread position: 5-220
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 112, 68

Conread position: 5-228
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 121, 0

Conread position: 5-289
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 198, 121

Conread position: 7-170
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 7-288
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 120, 101

Conread position: 7-288
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 120, 101

Conread position: 7-301
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 52

Conread position: 7-312
Cow position:
Alignm length: 321
Alignm identity: 213
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 217, 109

Conread position: 8-222
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 8-224
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 8-224
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 8-278
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 108

Conread position: 8-298
Cow position:
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 117

Conread position: 8-303
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 128, 73

Conread position: 9-222
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 10-252
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 121

Conread position: 10-277
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 126, 51

Conread position: 11-281
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 125, 22

Conread position: 11-316
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 148, 67

Conread position: 11-350
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 122, 113

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 105

Conread position: 12-207
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 12-217
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 12-221
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 57

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 26

Conread position: 12-222
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 12

Conread position: 12-222
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 59

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 121, 79

Conread position: 12-224
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 121, 41

Conread position: 12-225
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 12-229
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 55

Conread position: 12-252
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 57

Conread position: 12-255
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 56

Conread position: 12-269
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 115, 55

Conread position: 12-272
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 205, 97

Conread position: 12-276
Cow position:
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 12-281
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 60

Conread position: 12-281
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 49

Conread position: 12-293
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 49

Conread position: 12-293
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 203, 61

Conread position: 12-293
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 123, 96

Conread position: 12-297
Cow position:
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 212, 61

Conread position: 12-300
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 16

Conread position: 12-301
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 21, 27

Conread position: 12-311
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 41

Conread position: 12-320
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 124, 58

Conread position: 13-170
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 59

Conread position: 13-222
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 36

Conread position: 13-222
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 28

Conread position: 13-222
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 13-223
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 13-234
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 13-252
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 56

Conread position: 13-291
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 62

Conread position: 13-292
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 46

Conread position: 13-301
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 40

Conread position: 13-314
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 120, 101

Conread position: 13-360
Cow position:
Alignm length: 356
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 163, 25

Conread position: 14-278
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 47

Conread position: 14-309
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 58

Conread position: 15-207
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 15-289
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 96

Conread position: 15-293
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 17-287
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 106

Conread position: 18-220
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 18-222
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 189, 55

Conread position: 18-222
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 57

Conread position: 18-223
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 117, 51

Conread position: 18-252
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 223, 6

Conread position: 18-272
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 56

Conread position: 18-281
Cow position:
Alignm length: 264
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 18-292
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 61

Conread position: 18-293
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 118, 34

Conread position: 18-293
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 51

Conread position: 18-301
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 99

Conread position: 18-301
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 175, 52

Conread position: 19-222
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 19

Conread position: 19-223
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 19-293
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 203, 35

Conread position: 20-268
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 138

Conread position: 20-277
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 62

Conread position: 20-289
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 204, 58

Conread position: 20-317
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 33

Conread position: 20-318
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 103

Conread position: 21-199
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 59

Conread position: 21-296
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 24

Conread position: 23-252
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 23-317
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 106

Conread position: 25-223
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 96

Conread position: 29-299
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 47

Conread position: 29-305
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 16

Conread position: 31-301
Cow position:
Alignm length: 278
Alignm identity: 208
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 166, 44

Conread position: 32-247
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 93, 40

Conread position: 36-293
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 43

Conread position: 36-301
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 9

Conread position: 36-317
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 89

Conread position: 37-291
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 41

Conread position: 39-293
Cow position:
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 39-299
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 184, 43

Conread position: 40-292
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 116, 0

Conread position: 47-293
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 89, 28

Conread position: 54-278
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 171, 24

Conread position: 61-292
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 144, 65

Conread position: 64-289
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 45

Conread position: 70-224
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 80-300
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 155, 46

Conread position: 82-292
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 38

Conread position: 93-290
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 27

Conread position: 94-299
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 113-293
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 64

Conread position: 116-309
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 121, 10

Conread position: 117-296
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 111, 19

Conread position: 118-292
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 55

Conread position: 118-309
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 55

Conread position: 119-264
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 122-293
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 122-311
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 51

Conread position: 125-298
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 47

Conread position: 132-292
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 36

Conread position: 134-297
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 38

Conread position: 136-336
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 36

Conread position: 138-311
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 138-384
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 150, 18

Conread position: 143-291
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 175-301
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 63

Conread position: 175-317
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 127, 63

Show alignments to all cow chromosomes.