Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 2-212
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 149, 64

Conread position: 3-223
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 10

Conread position: 3-287
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 10, 70

Conread position: 3-306
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 35

Conread position: 5-222
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 7-206
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 7-227
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 118, 0

Conread position: 7-227
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 7-276
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 72

Conread position: 7-299
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 62

Conread position: 7-301
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 7-308
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 62

Conread position: 7-335
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 217, 62

Conread position: 8-145
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 106

Conread position: 8-166
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 126, 10

Conread position: 8-190
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 125, 68

Conread position: 8-223
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 8-224
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 67

Conread position: 8-277
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 216, 20

Conread position: 8-277
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 36

Conread position: 8-287
Cow position:
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 8-299
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 128, 46

Conread position: 8-301
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 125, 28

Conread position: 8-302
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 216, 51

Conread position: 8-305
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 248, 9

Conread position: 8-317
Cow position:
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 114

Conread position: 9-309
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 216, 60

Conread position: 9-311
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 37

Conread position: 10-207
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 10-276
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 25

Conread position: 10-298
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 214, 28

Conread position: 11-215
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 48

Conread position: 12-155
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 57

Conread position: 12-169
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 12-188
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 12-189
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 12-217
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 66

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 61

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 29

Conread position: 12-222
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 67

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 58

Conread position: 12-224
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 14

Conread position: 12-224
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 12-238
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 12-274
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 12-277
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 196, 57

Conread position: 12-278
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 12-287
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 114

Conread position: 12-291
Cow position:
Alignm length: 280
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 12-292
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 12-292
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 66

Conread position: 12-292
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 12-293
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 12-296
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 12-298
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 13

Conread position: 12-301
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 26

Conread position: 12-301
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 227, 41

Conread position: 12-307
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 57, 121

Conread position: 12-314
Cow position:
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 134

Conread position: 12-350
Cow position:
Alignm length: 356
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 61

Conread position: 13-199
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 13-203
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 13-207
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 13-221
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 13-222
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 103

Conread position: 13-229
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 103

Conread position: 13-278
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 23

Conread position: 13-293
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 48

Conread position: 13-301
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 110, 25

Conread position: 13-301
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 65

Conread position: 13-315
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 103, 0

Conread position: 17-278
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 207, 19

Conread position: 17-278
Cow position:
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 13

Conread position: 17-293
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 206, 57

Conread position: 18-220
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 18-222
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 18-223
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 45

Conread position: 18-235
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 20

Conread position: 18-276
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 210, 41

Conread position: 18-284
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 110

Conread position: 18-286
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 68

Conread position: 18-291
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 19

Conread position: 18-293
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 118, 93

Conread position: 18-293
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 118, 43

Conread position: 18-304
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 281, 32

Conread position: 18-305
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 43

Conread position: 18-310
Cow position:
Alignm length: 302
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 30

Conread position: 20-222
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 20-222
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 156, 49

Conread position: 20-290
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 16

Conread position: 20-296
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 198, 33

Conread position: 20-300
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 96

Conread position: 20-333
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 54

Conread position: 21-221
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 21-312
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 51, 58

Conread position: 23-300
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 93

Conread position: 24-222
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 24-298
Cow position:
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 84

Conread position: 25-287
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 180, 53

Conread position: 29-301
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 145, 46

Conread position: 30-293
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 97

Conread position: 35-217
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 101, 43

Conread position: 36-241
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 93

Conread position: 38-278
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 85

Conread position: 39-221
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 22

Conread position: 39-316
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 43

Conread position: 40-199
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 42-187
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 85

Conread position: 42-224
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 54-215
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 26

Conread position: 54-299
Cow position:
Alignm length: 247
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 66

Conread position: 55-293
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 65

Conread position: 64-298
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 44

Conread position: 67-472
Cow position:
Alignm length: 418
Alignm identity: 270
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 8

Conread position: 75-298
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 45

Conread position: 79-278
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 43

Conread position: 80-293
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 40

Conread position: 85-293
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 35

Conread position: 92-293
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 92-305
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 158, 33

Conread position: 93-293
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 95-298
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 41, 25

Conread position: 97-308
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 28

Conread position: 104-317
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 7

Conread position: 109-299
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 116-298
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 118-293
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 118-301
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 55

Conread position: 118-304
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 19

Conread position: 122-277
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 51

Conread position: 122-293
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 123-293
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 54

Conread position: 132-290
Cow position:
Alignm length: 159
Alignm identity: 130
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 132-293
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 132-317
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 30

Conread position: 134-260
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 137-333
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 36

Conread position: 138-277
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 35

Conread position: 142-294
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 144-311
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 33

Conread position: 152-293
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 175-293
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.