Cow genome map
| Conread name: | Ss1.1-rcbe22_g17.5 |
| Conread position: | 2-221 |
| Cow position: | chr15:42788959-42789171 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 3-203 |
| Cow position: | chr15:13387268-13387072 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 3-252 |
| Cow position: | chr15:23572496-23572739 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 3-292 |
| Cow position: | chr15:50177301-50177016 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 3-300 |
| Cow position: | chr15:33178236-33178545 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 56 |
| Conread position: | 3-300 |
| Cow position: | chr15:37931573-37931854 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 3-305 |
| Cow position: | chr15:2800165-2799875 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 4-252 |
| Cow position: | chr15:43626653-43626415 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 237, 8 |
| Conread position: | 7-202 |
| Cow position: | chr15:47843064-47843255 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-208 |
| Cow position: | chr15:20391090-20391285 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 7-223 |
| Cow position: | chr15:16604006-16603800 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 7-300 |
| Cow position: | chr15:22531246-22530962 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 173, 26 |
| Conread position: | 8-204 |
| Cow position: | chr15:18018107-18017923 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 8-211 |
| Cow position: | chr15:9928543-9928346 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 8-252 |
| Cow position: | chr15:4138316-4138084 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 8-269 |
| Cow position: | chr15:53045694-53045947 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 129, 70 |
| Conread position: | 8-277 |
| Cow position: | chr15:9970792-9971056 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 8-292 |
| Cow position: | chr15:6462314-6462604 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 205, 65 |
| Conread position: | 8-296 |
| Cow position: | chr15:43776533-43776256 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 8-300 |
| Cow position: | chr15:33625138-33624851 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 103 |
| Conread position: | 8-301 |
| Cow position: | chr15:9494113-9494398 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 125, 43 |
| Conread position: | 8-301 |
| Cow position: | chr15:42143039-42142753 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 203, 37 |
| Conread position: | 8-316 |
| Cow position: | chr15:43599371-43599077 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 129, 30 |
| Conread position: | 9-224 |
| Cow position: | chr15:1297919-1297713 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 9-373 |
| Cow position: | chr15:11646305-11646656 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 10-222 |
| Cow position: | chr15:35945710-35945506 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 10-293 |
| Cow position: | chr15:2144949-2145227 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 109 |
| Conread position: | 10-293 |
| Cow position: | chr15:44051320-44051593 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 10-293 |
| Cow position: | chr15:44879784-44879512 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 193, 63 |
| Conread position: | 11-206 |
| Cow position: | chr15:36391855-36391667 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 11-313 |
| Cow position: | chr15:27247682-27247391 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 217, 89 |
| Conread position: | 12-207 |
| Cow position: | chr15:10608126-10608314 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 12-217 |
| Cow position: | chr15:10660372-10660574 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 12-222 |
| Cow position: | chr15:286660-286454 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 12-222 |
| Cow position: | chr15:1329923-1330127 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-222 |
| Cow position: | chr15:16112579-16112376 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 12-222 |
| Cow position: | chr15:16927918-16928118 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-222 |
| Cow position: | chr15:22871785-22871590 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 12-222 |
| Cow position: | chr15:22939145-22939349 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 12-222 |
| Cow position: | chr15:35440896-35441102 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 12-224 |
| Cow position: | chr15:5726503-5726299 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-233 |
| Cow position: | chr15:4277886-4278094 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 12-246 |
| Cow position: | chr15:5158554-5158327 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 230, 48 |
| Conread position: | 12-252 |
| Cow position: | chr15:4418223-4418452 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 229, 57 |
| Conread position: | 12-252 |
| Cow position: | chr15:8665412-8665657 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 12-255 |
| Cow position: | chr15:26421420-26421655 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 205, 61 |
| Conread position: | 12-264 |
| Cow position: | chr15:17213630-17213392 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 244, 49 |
| Conread position: | 12-278 |
| Cow position: | chr15:26903376-26903096 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 12-287 |
| Cow position: | chr15:47821989-47821727 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 12-289 |
| Cow position: | chr15:31545173-31545438 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 124, 60 |
| Conread position: | 12-289 |
| Cow position: | chr15:31616824-31617096 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 12-290 |
| Cow position: | chr15:35967310-35967574 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 121, 64 |
| Conread position: | 12-290 |
| Cow position: | chr15:43130495-43130233 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 12-293 |
| Cow position: | chr15:794835-795129 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 12-293 |
| Cow position: | chr15:37918821-37918552 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 193, 82 |
| Conread position: | 12-293 |
| Cow position: | chr15:50322775-50322499 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 220, 66 |
| Conread position: | 12-296 |
| Cow position: | chr15:11957720-11957442 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 239, 81 |
| Conread position: | 12-297 |
| Cow position: | chr15:13554533-13554266 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 276, 57 |
| Conread position: | 12-300 |
| Cow position: | chr15:8022228-8021955 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 12-300 |
| Cow position: | chr15:12163339-12163620 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 121, 104 |
| Conread position: | 12-301 |
| Cow position: | chr15:5234824-5235110 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 196, 24 |
| Conread position: | 12-301 |
| Cow position: | chr15:21421118-21420827 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 164, 61 |
| Conread position: | 12-302 |
| Cow position: | chr15:24976998-24977275 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 12-302 |
| Cow position: | chr15:49274131-49273842 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 12-308 |
| Cow position: | chr15:15215199-15214905 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 191, 114 |
| Conread position: | 12-310 |
| Cow position: | chr15:17100531-17100835 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 211, 57 |
| Conread position: | 12-311 |
| Cow position: | chr15:37205224-37204940 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 12-313 |
| Cow position: | chr15:24411594-24411308 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 12-314 |
| Cow position: | chr15:21893961-21893648 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 12-317 |
| Cow position: | chr15:6749669-6749963 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 287, 28 |
| Conread position: | 12-321 |
| Cow position: | chr15:15881108-15880807 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 92, 51 |
| Conread position: | 12-327 |
| Cow position: | chr15:14758073-14758378 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 193, 66 |
| Conread position: | 12-340 |
| Cow position: | chr15:26573557-26573239 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 322, 49 |
| Conread position: | 13-198 |
| Cow position: | chr15:40343427-40343248 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 13-229 |
| Cow position: | chr15:49922314-49922103 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-254 |
| Cow position: | chr15:9178030-9178257 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 206, 65 |
| Conread position: | 13-267 |
| Cow position: | chr15:7962259-7962014 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 13-278 |
| Cow position: | chr15:4508327-4508072 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 13-292 |
| Cow position: | chr15:37964713-37964443 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 88 |
| Conread position: | 13-292 |
| Cow position: | chr15:44252540-44252273 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 13-298 |
| Cow position: | chr15:24285159-24284886 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 13-300 |
| Cow position: | chr15:20482667-20482947 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 13-315 |
| Cow position: | chr15:43114544-43114852 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 13-316 |
| Cow position: | chr15:31907826-31907537 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 224, 103 |
| Conread position: | 13-317 |
| Cow position: | chr15:27973039-27973340 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 199, 59 |
| Conread position: | 13-317 |
| Cow position: | chr15:31599511-31599213 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 224, 112 |
| Conread position: | 14-216 |
| Cow position: | chr15:43248594-43248795 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 143, 110 |
| Conread position: | 14-222 |
| Cow position: | chr15:26911899-26912096 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 14-298 |
| Cow position: | chr15:7192077-7192362 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 16-244 |
| Cow position: | chr15:38323015-38322790 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 18-192 |
| Cow position: | chr15:27732581-27732418 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 18-207 |
| Cow position: | chr15:20352004-20351823 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 18-208 |
| Cow position: | chr15:7307981-7308167 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 18-222 |
| Cow position: | chr15:12870691-12870888 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 18-226 |
| Cow position: | chr15:18671279-18671482 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 18-228 |
| Cow position: | chr15:30934377-30934573 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 18-251 |
| Cow position: | chr15:85077-85295 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 18-252 |
| Cow position: | chr15:32324033-32324258 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 224, 35 |
| Conread position: | 18-255 |
| Cow position: | chr15:9001126-9000903 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 120, 59 |
| Conread position: | 18-257 |
| Cow position: | chr15:19279915-19280150 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 30 |
| Conread position: | 18-261 |
| Cow position: | chr15:19812823-19812597 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 18-287 |
| Cow position: | chr15:24864095-24864351 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 18-296 |
| Cow position: | chr15:9648534-9648804 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 170, 51 |
| Conread position: | 18-296 |
| Cow position: | chr15:39599615-39599334 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 203, 51 |
| Conread position: | 18-300 |
| Cow position: | chr15:3572528-3572799 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 18-301 |
| Cow position: | chr15:449887-450152 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 18-398 |
| Cow position: | chr15:35425640-35426016 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 208, 53 |
| Conread position: | 20-213 |
| Cow position: | chr15:6970160-6969974 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 113, 53 |
| Conread position: | 20-222 |
| Cow position: | chr15:34140157-34139957 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 20-223 |
| Cow position: | chr15:37645159-37644965 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 20-229 |
| Cow position: | chr15:2141124-2141334 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 20-237 |
| Cow position: | chr15:36839002-36839212 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 103 |
| Conread position: | 20-252 |
| Cow position: | chr15:36793315-36793547 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 20-281 |
| Cow position: | chr15:10570441-10570695 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 102 |
| Conread position: | 20-293 |
| Cow position: | chr15:40498119-40498396 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 117, 100 |
| Conread position: | 20-318 |
| Cow position: | chr15:20459133-20459426 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 21-291 |
| Cow position: | chr15:34037025-34037278 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 21-293 |
| Cow position: | chr15:5717883-5717607 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 202, 52 |
| Conread position: | 21-296 |
| Cow position: | chr15:26933785-26934046 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 21-301 |
| Cow position: | chr15:13285189-13284912 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 223, 48 |
| Conread position: | 21-304 |
| Cow position: | chr15:41527806-41528089 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 186, 53 |
| Conread position: | 26-222 |
| Cow position: | chr15:14176334-14176523 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 28-287 |
| Cow position: | chr15:31043032-31042776 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 29-177 |
| Cow position: | chr15:44250815-44250670 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 29-315 |
| Cow position: | chr15:8230401-8230680 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 104, 87 |
| Conread position: | 30-222 |
| Cow position: | chr15:32977683-32977870 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:12170406-12170145 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 32-300 |
| Cow position: | chr15:19920175-19920429 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 104, 41 |
| Conread position: | 35-292 |
| Cow position: | chr15:6491434-6491686 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 246, 42 |
| Conread position: | 35-302 |
| Cow position: | chr15:38827168-38827435 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 189, 34 |
| Conread position: | 54-291 |
| Cow position: | chr15:37284594-37284369 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 57-293 |
| Cow position: | chr15:34255592-34255812 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 61-291 |
| Cow position: | chr15:20370596-20370816 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 62-292 |
| Cow position: | chr15:49237862-49238082 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 45 |
| Conread position: | 64-227 |
| Cow position: | chr15:46005523-46005677 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 65-287 |
| Cow position: | chr15:25689098-25688878 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 65-298 |
| Cow position: | chr15:6037326-6037564 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 66-344 |
| Cow position: | chr15:23992973-23992702 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 19 |
| Conread position: | 69-293 |
| Cow position: | chr15:23109159-23109377 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 69-344 |
| Cow position: | chr15:38846030-38845760 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 70-293 |
| Cow position: | chr15:19725595-19725803 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 73-292 |
| Cow position: | chr15:20778139-20777922 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 74-281 |
| Cow position: | chr15:1017626-1017830 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 146, 51 |
| Conread position: | 75-226 |
| Cow position: | chr15:23719364-23719511 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 77-293 |
| Cow position: | chr15:14020602-14020385 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 78-295 |
| Cow position: | chr15:43612198-43611988 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 82-301 |
| Cow position: | chr15:30958103-30958312 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 84-288 |
| Cow position: | chr15:42353497-42353290 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 92-301 |
| Cow position: | chr15:39916796-39916590 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 109-293 |
| Cow position: | chr15:45761149-45761334 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 117-317 |
| Cow position: | chr15:12314639-12314431 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 118-269 |
| Cow position: | chr15:31502806-31502955 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 118-315 |
| Cow position: | chr15:31483449-31483252 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 118-362 |
| Cow position: | chr15:33677461-33677205 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 127 |
| Conread position: | 122-297 |
| Cow position: | chr15:51361300-51361126 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 122-325 |
| Cow position: | chr15:52389673-52389469 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 125-278 |
| Cow position: | chr15:7059332-7059483 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 125-293 |
| Cow position: | chr15:44297158-44296996 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 127-293 |
| Cow position: | chr15:20402477-20402637 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 129-293 |
| Cow position: | chr15:52377611-52377448 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 131-235 |
| Cow position: | chr15:30005237-30005340 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 139-300 |
| Cow position: | chr15:2117941-2117784 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 140-311 |
| Cow position: | chr15:23547933-23548100 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 32 |
Show alignments to all cow chromosomes.