Cow genome map
| Conread name: | Ss1.1-rcbe22_g17.5 |
| Conread position: | 2-204 |
| Cow position: | chr16:18141431-18141231 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 2-214 |
| Cow position: | chr16:18072071-18072278 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 2-221 |
| Cow position: | chr16:7549865-7550080 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 2-229 |
| Cow position: | chr16:48545720-48545942 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 3-312 |
| Cow position: | chr16:44581170-44580876 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 4-216 |
| Cow position: | chr16:15960388-15960182 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 7-199 |
| Cow position: | chr16:32327555-32327749 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 46 |
| Conread position: | 7-222 |
| Cow position: | chr16:6319104-6319317 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 7-268 |
| Cow position: | chr16:12501257-12501001 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 8-162 |
| Cow position: | chr16:10650985-10650833 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 8-163 |
| Cow position: | chr16:13233043-13232893 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-198 |
| Cow position: | chr16:42752760-42752940 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 8-222 |
| Cow position: | chr16:22842153-22841946 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 8-222 |
| Cow position: | chr16:23738085-23738294 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 8-223 |
| Cow position: | chr16:20633973-20633761 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 160, 93 |
| Conread position: | 8-226 |
| Cow position: | chr16:13195436-13195222 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 204, 114 |
| Conread position: | 8-278 |
| Cow position: | chr16:41689602-41689859 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 8-278 |
| Cow position: | chr16:46627930-46627679 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 8-299 |
| Cow position: | chr16:11008249-11008538 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 179, 71 |
| Conread position: | 8-302 |
| Cow position: | chr16:15808880-15809170 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 71 |
| Conread position: | 9-222 |
| Cow position: | chr16:49229866-49229657 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 9-250 |
| Cow position: | chr16:16548516-16548748 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 117 |
| Conread position: | 9-290 |
| Cow position: | chr16:27723119-27723410 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 66, 125 |
| Conread position: | 9-293 |
| Cow position: | chr16:19670441-19670156 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 216, 29 |
| Conread position: | 9-301 |
| Cow position: | chr16:22808646-22808365 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 9-302 |
| Cow position: | chr16:48493085-48493375 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 69 |
| Conread position: | 10-204 |
| Cow position: | chr16:26030975-26030790 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-251 |
| Cow position: | chr16:10032547-10032780 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 10-299 |
| Cow position: | chr16:7542194-7542493 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 165 |
| Conread position: | 11-245 |
| Cow position: | chr16:9444870-9445095 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 12-165 |
| Cow position: | chr16:9933068-9933216 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 12-178 |
| Cow position: | chr16:4981473-4981306 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 12-199 |
| Cow position: | chr16:53891872-53891696 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 12-220 |
| Cow position: | chr16:37452706-37452502 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 12-220 |
| Cow position: | chr16:54664891-54664687 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 164, 62 |
| Conread position: | 12-221 |
| Cow position: | chr16:8933514-8933314 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 207, 63 |
| Conread position: | 12-221 |
| Cow position: | chr16:13611544-13611342 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-221 |
| Cow position: | chr16:56796756-56796553 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-222 |
| Cow position: | chr16:4910617-4910411 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 12-222 |
| Cow position: | chr16:43674784-43674988 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 12-222 |
| Cow position: | chr16:49169475-49169267 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 68, 114 |
| Conread position: | 12-222 |
| Cow position: | chr16:51112967-51112766 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 12-223 |
| Cow position: | chr16:30037082-30036876 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 12-224 |
| Cow position: | chr16:42242206-42242002 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 12-224 |
| Cow position: | chr16:43801009-43800804 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 12-238 |
| Cow position: | chr16:14685480-14685258 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 162, 57 |
| Conread position: | 12-238 |
| Cow position: | chr16:42257359-42257575 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 12-243 |
| Cow position: | chr16:25380584-25380360 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 12-245 |
| Cow position: | chr16:52222418-52222196 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 12-251 |
| Cow position: | chr16:19047526-19047292 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 12-252 |
| Cow position: | chr16:7152262-7152030 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 12-252 |
| Cow position: | chr16:12273978-12274211 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-254 |
| Cow position: | chr16:13698422-13698660 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 12-255 |
| Cow position: | chr16:2223492-2223251 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 12-260 |
| Cow position: | chr16:10303838-10303600 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 12-275 |
| Cow position: | chr16:54515634-54515884 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 12-277 |
| Cow position: | chr16:23025255-23025506 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 12-278 |
| Cow position: | chr16:36930410-36930150 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 12-281 |
| Cow position: | chr16:38620867-38621126 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 175, 65 |
| Conread position: | 12-287 |
| Cow position: | chr16:51070009-51069738 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 113, 93 |
| Conread position: | 12-291 |
| Cow position: | chr16:42312296-42312565 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 12-298 |
| Cow position: | chr16:13660325-13660046 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 12-298 |
| Cow position: | chr16:25839528-25839818 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 212, 66 |
| Conread position: | 12-299 |
| Cow position: | chr16:10148190-10148475 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 216, 66 |
| Conread position: | 12-299 |
| Cow position: | chr16:36121070-36120788 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 216, 47 |
| Conread position: | 12-300 |
| Cow position: | chr16:53267633-53267913 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 123, 110 |
| Conread position: | 12-302 |
| Cow position: | chr16:23066570-23066846 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 191, 110 |
| Conread position: | 12-311 |
| Cow position: | chr16:54226689-54226394 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 211, 47 |
| Conread position: | 12-316 |
| Cow position: | chr16:18205870-18206180 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 13-202 |
| Cow position: | chr16:13969461-13969276 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 13-207 |
| Cow position: | chr16:38905318-38905135 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 13-207 |
| Cow position: | chr16:41608523-41608706 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 103 |
| Conread position: | 13-222 |
| Cow position: | chr16:17626841-17627043 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-222 |
| Cow position: | chr16:18402595-18402800 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 13-223 |
| Cow position: | chr16:11957673-11957464 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 13-253 |
| Cow position: | chr16:19976886-19977107 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 13-277 |
| Cow position: | chr16:27013808-27014068 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 13-286 |
| Cow position: | chr16:49511489-49511760 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 13-293 |
| Cow position: | chr16:16565033-16565310 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 213, 32 |
| Conread position: | 13-301 |
| Cow position: | chr16:41530380-41530094 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 55 |
| Conread position: | 13-301 |
| Cow position: | chr16:56565508-56565798 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 13-306 |
| Cow position: | chr16:50289060-50289342 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 13-313 |
| Cow position: | chr16:6344532-6344235 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 212, 113 |
| Conread position: | 13-317 |
| Cow position: | chr16:14754412-14754102 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 137, 60 |
| Conread position: | 14-278 |
| Cow position: | chr16:37062484-37062236 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 14-298 |
| Cow position: | chr16:45047718-45047448 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 120, 55 |
| Conread position: | 14-300 |
| Cow position: | chr16:40333415-40333126 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 210, 110 |
| Conread position: | 17-292 |
| Cow position: | chr16:51652588-51652849 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 18-165 |
| Cow position: | chr16:39237860-39238004 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 18-217 |
| Cow position: | chr16:18757925-18757730 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 18-221 |
| Cow position: | chr16:52133597-52133404 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 18-223 |
| Cow position: | chr16:20025362-20025556 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 18-224 |
| Cow position: | chr16:17288862-17289063 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 18-277 |
| Cow position: | chr16:12072556-12072802 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 186, 69 |
| Conread position: | 18-286 |
| Cow position: | chr16:21317680-21317414 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 18-287 |
| Cow position: | chr16:18557348-18557086 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 118, 43 |
| Conread position: | 18-292 |
| Cow position: | chr16:51696997-51697276 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 18-293 |
| Cow position: | chr16:8323067-8322794 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 54 |
| Conread position: | 18-293 |
| Cow position: | chr16:50931601-50931331 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 171, 57 |
| Conread position: | 18-293 |
| Cow position: | chr16:53627512-53627251 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 18-295 |
| Cow position: | chr16:22772893-22773178 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 57 |
| Conread position: | 18-298 |
| Cow position: | chr16:37719073-37719342 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 18-298 |
| Cow position: | chr16:42734100-42733814 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 18-299 |
| Cow position: | chr16:16265184-16264911 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 223, 43 |
| Conread position: | 18-304 |
| Cow position: | chr16:228572-228302 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 18-316 |
| Cow position: | chr16:33596018-33595727 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 169, 50 |
| Conread position: | 18-317 |
| Cow position: | chr16:45693062-45693352 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 115, 98 |
| Conread position: | 19-222 |
| Cow position: | chr16:8076591-8076388 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 109 |
| Conread position: | 19-279 |
| Cow position: | chr16:41711598-41711842 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 117, 50 |
| Conread position: | 20-195 |
| Cow position: | chr16:39646462-39646631 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 20-199 |
| Cow position: | chr16:25965420-25965590 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 20-224 |
| Cow position: | chr16:23955913-23955716 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 20-263 |
| Cow position: | chr16:43505887-43505657 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 51 |
| Conread position: | 20-293 |
| Cow position: | chr16:11085465-11085198 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 113, 68 |
| Conread position: | 20-295 |
| Cow position: | chr16:8315273-8315008 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 20-300 |
| Cow position: | chr16:52577374-52577648 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 20-308 |
| Cow position: | chr16:26373031-26372743 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 208, 55 |
| Conread position: | 20-316 |
| Cow position: | chr16:30639254-30639531 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 20-329 |
| Cow position: | chr16:44297-44584 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 273, 31 |
| Conread position: | 21-222 |
| Cow position: | chr16:56671002-56670805 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 21-291 |
| Cow position: | chr16:42340114-42340377 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 115, 56 |
| Conread position: | 21-311 |
| Cow position: | chr16:44898837-44898556 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 23-205 |
| Cow position: | chr16:31426264-31426439 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 24-293 |
| Cow position: | chr16:39165163-39165435 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 200, 44 |
| Conread position: | 24-318 |
| Cow position: | chr16:8017889-8018183 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 24-334 |
| Cow position: | chr16:8025928-8025631 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 200, 37 |
| Conread position: | 32-210 |
| Cow position: | chr16:4979729-4979904 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 84 |
| Conread position: | 32-226 |
| Cow position: | chr16:9161008-9161201 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 32-301 |
| Cow position: | chr16:56445484-56445231 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 35-300 |
| Cow position: | chr16:8441871-8441622 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 38-223 |
| Cow position: | chr16:18354021-18353843 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 39-252 |
| Cow position: | chr16:32302068-32301863 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 40-278 |
| Cow position: | chr16:28827241-28827009 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 42-292 |
| Cow position: | chr16:19003150-19002909 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 45-294 |
| Cow position: | chr16:12688166-12687914 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 160, 75 |
| Conread position: | 46-301 |
| Cow position: | chr16:34291350-34291090 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 47-300 |
| Cow position: | chr16:29655261-29655523 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 49-223 |
| Cow position: | chr16:7394989-7394816 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 51-233 |
| Cow position: | chr16:56104965-56104789 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 69-301 |
| Cow position: | chr16:53408967-53408737 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 75-299 |
| Cow position: | chr16:47909373-47909154 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 75-301 |
| Cow position: | chr16:15805925-15806145 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 77-252 |
| Cow position: | chr16:15905278-15905103 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 151, 48 |
| Conread position: | 77-316 |
| Cow position: | chr16:15254781-15254548 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 78-293 |
| Cow position: | chr16:16056086-16055878 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 80-295 |
| Cow position: | chr16:18693175-18692961 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 124, 45 |
| Conread position: | 107-293 |
| Cow position: | chr16:11653140-11653332 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 110-308 |
| Cow position: | chr16:42629439-42629248 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 117-281 |
| Cow position: | chr16:44688382-44688209 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 118-290 |
| Cow position: | chr16:56282957-56283125 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 118-310 |
| Cow position: | chr16:50114196-50114387 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 118-316 |
| Cow position: | chr16:10611612-10611426 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 171, 13 |
| Conread position: | 118-350 |
| Cow position: | chr16:9407864-9407635 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 122-301 |
| Cow position: | chr16:4102817-4102631 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 130-287 |
| Cow position: | chr16:30929901-30930056 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 132-299 |
| Cow position: | chr16:11772223-11772060 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 132-300 |
| Cow position: | chr16:10617829-10617666 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 134-293 |
| Cow position: | chr16:20664317-20664471 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 136-293 |
| Cow position: | chr16:10406552-10406396 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 138-291 |
| Cow position: | chr16:47963322-47963473 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 145-278 |
| Cow position: | chr16:52565458-52565587 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 148-307 |
| Cow position: | chr16:55070480-55070320 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 170-317 |
| Cow position: | chr16:46680876-46681019 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.