Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 67

Conread position: 2-271
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 31

Conread position: 2-317
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 130, 11

Conread position: 2-371
Cow position:
Alignm length: 384
Alignm identity: 251
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 15

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 3-301
Cow position:
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 43

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 7-207
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 65

Conread position: 7-222
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 7-293
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 66

Conread position: 7-295
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 59, 11

Conread position: 8-140
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 65, 0

Conread position: 8-165
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 74

Conread position: 8-207
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 8-224
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 66

Conread position: 8-255
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 8-293
Cow position:
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 8-298
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 211, 118

Conread position: 8-302
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 125, 51

Conread position: 9-293
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 194, 69

Conread position: 10-205
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 10-292
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 123, 73

Conread position: 10-298
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 110

Conread position: 11-266
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 122, 62

Conread position: 11-286
Cow position:
Alignm length: 295
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 7

Conread position: 11-287
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 7

Conread position: 12-207
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 114

Conread position: 12-207
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 12-207
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 58

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 12-223
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 178, 33

Conread position: 12-231
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 12-249
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 203, 50

Conread position: 12-251
Cow position:
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 66

Conread position: 12-255
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 69

Conread position: 12-259
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 12-272
Cow position:
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 33

Conread position: 12-277
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 164, 57

Conread position: 12-281
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 105

Conread position: 12-281
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 104

Conread position: 12-287
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 59, 105

Conread position: 12-291
Cow position:
Alignm length: 280
Alignm identity: 188
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 12-291
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 38

Conread position: 12-291
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 114

Conread position: 12-292
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 212, 57

Conread position: 12-293
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 104

Conread position: 12-295
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 47

Conread position: 12-296
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 14

Conread position: 12-298
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 37

Conread position: 12-299
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 164, 57

Conread position: 12-301
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 29

Conread position: 12-301
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 105

Conread position: 12-312
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 192, 61

Conread position: 12-321
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 212, 49

Conread position: 12-356
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 57

Conread position: 13-207
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 13-227
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 118

Conread position: 13-235
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 13-289
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 24

Conread position: 13-293
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 215, 5

Conread position: 13-298
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 32

Conread position: 13-301
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 122, 103

Conread position: 13-318
Cow position:
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 109

Conread position: 14-308
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 210, 73

Conread position: 17-211
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 17-293
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 119, 55

Conread position: 18-222
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 53

Conread position: 18-222
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 95

Conread position: 18-223
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 18-252
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 23

Conread position: 18-275
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 18-292
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 118, 43

Conread position: 18-293
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 156, 59

Conread position: 18-299
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 270, 60

Conread position: 18-313
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 73, 64

Conread position: 18-315
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 60

Conread position: 19-292
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 14

Conread position: 19-317
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 192, 57

Conread position: 20-207
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 54

Conread position: 20-252
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 116, 16

Conread position: 20-298
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 221, 49

Conread position: 20-305
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 51

Conread position: 21-222
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 51, 106

Conread position: 21-317
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 208, 15

Conread position: 22-278
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 39

Conread position: 23-274
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 46

Conread position: 24-289
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 109, 57

Conread position: 27-301
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 28-298
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 32-222
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 46

Conread position: 32-301
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 33-216
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 83

Conread position: 33-316
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 85

Conread position: 34-290
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 52

Conread position: 37-320
Cow position:
Alignm length: 299
Alignm identity: 197
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 44, 92

Conread position: 38-315
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 39-225
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 16

Conread position: 40-222
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 40-316
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 191, 35

Conread position: 41-316
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 45-222
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 45-257
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 71

Conread position: 45-292
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 29

Conread position: 45-299
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 16

Conread position: 45-314
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 65-274
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 55

Conread position: 65-291
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 55

Conread position: 72-288
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 76-281
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 44

Conread position: 77-293
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 77-298
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 118, 48

Conread position: 78-292
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 42

Conread position: 79-235
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 79-252
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 30

Conread position: 80-308
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 40

Conread position: 81-276
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 87-293
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 38

Conread position: 89-292
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 118, 21

Conread position: 91-314
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 35

Conread position: 94-298
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 99-263
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 21

Conread position: 100-300
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 20

Conread position: 111-299
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 58

Conread position: 118-342
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 55

Conread position: 122-301
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 166, 10

Conread position: 122-308
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 40

Conread position: 132-308
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 143-287
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 0

Conread position: 169-293
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 174-281
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.