Cow genome map
| Conread name: | Ss1.1-rcbe22_g17.5 |
| Conread position: | 2-216 |
| Cow position: | chr18:19883396-19883607 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 151, 67 |
| Conread position: | 2-271 |
| Cow position: | chr18:24855978-24855716 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 2-317 |
| Cow position: | chr18:33299770-33300075 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 130, 11 |
| Conread position: | 2-371 |
| Cow position: | chr18:2146718-2146344 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-163 |
| Cow position: | chr18:47812337-47812492 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-301 |
| Cow position: | chr18:20127240-20126951 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 3-316 |
| Cow position: | chr18:45961402-45961100 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 7-207 |
| Cow position: | chr18:25282681-25282489 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 125, 65 |
| Conread position: | 7-222 |
| Cow position: | chr18:51691591-51691382 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-293 |
| Cow position: | chr18:48242061-48242350 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 66 |
| Conread position: | 7-295 |
| Cow position: | chr18:5072541-5072247 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 8-140 |
| Cow position: | chr18:42966737-42966866 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 8-165 |
| Cow position: | chr18:4952337-4952186 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 8-207 |
| Cow position: | chr18:4182316-4182123 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 8-224 |
| Cow position: | chr18:43555652-43555442 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 8-255 |
| Cow position: | chr18:38344678-38344916 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 8-293 |
| Cow position: | chr18:29796552-29796280 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-298 |
| Cow position: | chr18:29474613-29474911 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 211, 118 |
| Conread position: | 8-302 |
| Cow position: | chr18:18919084-18918786 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 9-293 |
| Cow position: | chr18:34325079-34324800 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 194, 69 |
| Conread position: | 10-205 |
| Cow position: | chr18:18369488-18369298 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 10-292 |
| Cow position: | chr18:43283883-43283589 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 123, 73 |
| Conread position: | 10-298 |
| Cow position: | chr18:9154759-9155044 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 127, 110 |
| Conread position: | 11-266 |
| Cow position: | chr18:32773752-32774001 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 122, 62 |
| Conread position: | 11-286 |
| Cow position: | chr18:56181587-56181297 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 11-287 |
| Cow position: | chr18:5755858-5756122 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 137, 7 |
| Conread position: | 12-207 |
| Cow position: | chr18:2864118-2863925 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 114 |
| Conread position: | 12-207 |
| Cow position: | chr18:21176064-21176252 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 12-207 |
| Cow position: | chr18:56165859-56166046 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 12-222 |
| Cow position: | chr18:19896578-19896371 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 12-222 |
| Cow position: | chr18:37023676-37023470 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 12-222 |
| Cow position: | chr18:51656167-51655962 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-222 |
| Cow position: | chr18:56159338-56159541 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 12-223 |
| Cow position: | chr18:50974417-50974212 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 12-231 |
| Cow position: | chr18:30341297-30341095 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 12-249 |
| Cow position: | chr18:20423098-20422871 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 203, 50 |
| Conread position: | 12-251 |
| Cow position: | chr18:23424796-23425026 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 12-255 |
| Cow position: | chr18:22056003-22055759 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 69 |
| Conread position: | 12-259 |
| Cow position: | chr18:40759083-40759321 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-272 |
| Cow position: | chr18:21706302-21706055 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 12-277 |
| Cow position: | chr18:5766289-5766560 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 12-281 |
| Cow position: | chr18:16842186-16841914 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 92, 105 |
| Conread position: | 12-281 |
| Cow position: | chr18:51298356-51298617 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 104 |
| Conread position: | 12-287 |
| Cow position: | chr18:19363812-19364076 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 12-291 |
| Cow position: | chr18:4040056-4040316 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-291 |
| Cow position: | chr18:25970758-25970499 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 12-291 |
| Cow position: | chr18:44262503-44262789 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 114 |
| Conread position: | 12-292 |
| Cow position: | chr18:36264889-36264614 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 212, 57 |
| Conread position: | 12-293 |
| Cow position: | chr18:22411738-22411462 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 104 |
| Conread position: | 12-295 |
| Cow position: | chr18:10214319-10214021 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 12-296 |
| Cow position: | chr18:42060953-42061227 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 12-298 |
| Cow position: | chr18:10322683-10322969 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 12-299 |
| Cow position: | chr18:32883183-32883466 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 12-301 |
| Cow position: | chr18:5632142-5632441 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 12-301 |
| Cow position: | chr18:40202931-40202652 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 105 |
| Conread position: | 12-312 |
| Cow position: | chr18:17005134-17005426 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 192, 61 |
| Conread position: | 12-321 |
| Cow position: | chr18:48713426-48713742 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 212, 49 |
| Conread position: | 12-356 |
| Cow position: | chr18:7956020-7956359 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 13-207 |
| Cow position: | chr18:25984692-25984511 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-227 |
| Cow position: | chr18:56191093-56190877 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 118 |
| Conread position: | 13-235 |
| Cow position: | chr18:35359849-35360060 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 13-289 |
| Cow position: | chr18:51643488-51643205 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 13-293 |
| Cow position: | chr18:20462816-20462539 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 215, 5 |
| Conread position: | 13-298 |
| Cow position: | chr18:51271873-51271589 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 13-301 |
| Cow position: | chr18:9806295-9806577 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 122, 103 |
| Conread position: | 13-318 |
| Cow position: | chr18:23715009-23714695 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 109 |
| Conread position: | 14-308 |
| Cow position: | chr18:19849877-19849588 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 210, 73 |
| Conread position: | 17-211 |
| Cow position: | chr18:23476806-23476618 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 17-293 |
| Cow position: | chr18:51587662-51587398 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 119, 55 |
| Conread position: | 18-222 |
| Cow position: | chr18:12273540-12273738 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 53 |
| Conread position: | 18-222 |
| Cow position: | chr18:48828898-48828695 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 18-223 |
| Cow position: | chr18:47967041-47966846 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 18-252 |
| Cow position: | chr18:3211755-3211986 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 18-275 |
| Cow position: | chr18:16726531-16726780 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 18-292 |
| Cow position: | chr18:14586582-14586312 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 43 |
| Conread position: | 18-293 |
| Cow position: | chr18:7109011-7109299 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 156, 59 |
| Conread position: | 18-299 |
| Cow position: | chr18:15831710-15831446 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 270, 60 |
| Conread position: | 18-313 |
| Cow position: | chr18:12584961-12584654 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 73, 64 |
| Conread position: | 18-315 |
| Cow position: | chr18:51406026-51405729 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 19-292 |
| Cow position: | chr18:19646056-19646324 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 19-317 |
| Cow position: | chr18:23487910-23488206 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 192, 57 |
| Conread position: | 20-207 |
| Cow position: | chr18:47517332-47517139 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 54 |
| Conread position: | 20-252 |
| Cow position: | chr18:16134426-16134205 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 20-298 |
| Cow position: | chr18:11377249-11377523 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 221, 49 |
| Conread position: | 20-305 |
| Cow position: | chr18:26334928-26334644 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 51 |
| Conread position: | 21-222 |
| Cow position: | chr18:19273216-19273016 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 21-317 |
| Cow position: | chr18:3422587-3422879 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 208, 15 |
| Conread position: | 22-278 |
| Cow position: | chr18:248927-248680 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 23-274 |
| Cow position: | chr18:24759768-24759510 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 112, 46 |
| Conread position: | 24-289 |
| Cow position: | chr18:22143635-22143367 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 27-301 |
| Cow position: | chr18:37331635-37331371 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 28-298 |
| Cow position: | chr18:16448448-16448692 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 32-222 |
| Cow position: | chr18:24508342-24508151 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 32-301 |
| Cow position: | chr18:50993375-50993130 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 33-216 |
| Cow position: | chr18:213642-213463 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 33-316 |
| Cow position: | chr18:40035888-40036153 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 34-290 |
| Cow position: | chr18:10101389-10101632 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 37-320 |
| Cow position: | chr18:380826-381119 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 38-315 |
| Cow position: | chr18:15689187-15689457 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 39-225 |
| Cow position: | chr18:5701153-5701331 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 40-222 |
| Cow position: | chr18:4673210-4673384 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 40-316 |
| Cow position: | chr18:5078871-5078595 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 191, 35 |
| Conread position: | 41-316 |
| Cow position: | chr18:2438860-2438596 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 45-222 |
| Cow position: | chr18:10656344-10656519 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 45-257 |
| Cow position: | chr18:56301799-56302008 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 88, 71 |
| Conread position: | 45-292 |
| Cow position: | chr18:20318134-20317896 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 45-299 |
| Cow position: | chr18:1190811-1190566 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 45-314 |
| Cow position: | chr18:38126541-38126280 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 65-274 |
| Cow position: | chr18:44400377-44400577 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 65-291 |
| Cow position: | chr18:50700614-50700832 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 72-288 |
| Cow position: | chr18:33843152-33842940 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 76-281 |
| Cow position: | chr18:47125463-47125256 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 77-293 |
| Cow position: | chr18:26458411-26458203 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 77-298 |
| Cow position: | chr18:2777815-2777591 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 78-292 |
| Cow position: | chr18:47693005-47693221 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 79-235 |
| Cow position: | chr18:43020462-43020312 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 79-252 |
| Cow position: | chr18:52251917-52251748 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 80-308 |
| Cow position: | chr18:26372862-26373086 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 81-276 |
| Cow position: | chr18:26843156-26842965 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 87-293 |
| Cow position: | chr18:6075447-6075240 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 135, 38 |
| Conread position: | 89-292 |
| Cow position: | chr18:21139852-21140051 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 91-314 |
| Cow position: | chr18:9846458-9846230 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 94-298 |
| Cow position: | chr18:44493527-44493332 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 99-263 |
| Cow position: | chr18:43555114-43554957 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 100-300 |
| Cow position: | chr18:52757980-52758175 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 111-299 |
| Cow position: | chr18:48717968-48717790 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 118-342 |
| Cow position: | chr18:48036795-48037014 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 122-301 |
| Cow position: | chr18:28297882-28297705 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 166, 10 |
| Conread position: | 122-308 |
| Cow position: | chr18:39503718-39503537 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 132-308 |
| Cow position: | chr18:29949741-29949909 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 143-287 |
| Cow position: | chr18:14520038-14520175 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 169-293 |
| Cow position: | chr18:23807612-23807489 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 174-281 |
| Cow position: | chr18:15267958-15267852 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.