Cow genome map
| Conread name: | Ss1.1-rcbe22_g17.5 |
| Conread position: | 1-281 |
| Cow position: | chr21:9940228-9939955 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 7-207 |
| Cow position: | chr21:42384478-42384670 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-222 |
| Cow position: | chr21:10004919-10004709 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-223 |
| Cow position: | chr21:25628942-25628734 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-291 |
| Cow position: | chr21:25800363-25800639 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 102 |
| Conread position: | 7-291 |
| Cow position: | chr21:33727497-33727217 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 71 |
| Conread position: | 7-299 |
| Cow position: | chr21:45355804-45356086 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 8-196 |
| Cow position: | chr21:1591521-1591705 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 8-207 |
| Cow position: | chr21:9416217-9416413 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 144, 70 |
| Conread position: | 8-222 |
| Cow position: | chr21:28989583-28989790 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 8-287 |
| Cow position: | chr21:30848979-30848689 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 8-287 |
| Cow position: | chr21:46552136-46551866 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 70 |
| Conread position: | 8-290 |
| Cow position: | chr21:33414116-33413835 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 8-291 |
| Cow position: | chr21:46607615-46607349 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-299 |
| Cow position: | chr21:46849158-46848861 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 220, 70 |
| Conread position: | 8-304 |
| Cow position: | chr21:15544249-15543960 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 216, 61 |
| Conread position: | 8-315 |
| Cow position: | chr21:23801159-23800864 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 69 |
| Conread position: | 8-320 |
| Cow position: | chr21:5898430-5898113 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 8-331 |
| Cow position: | chr21:3254120-3254435 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 9-224 |
| Cow position: | chr21:22210274-22210068 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 9-287 |
| Cow position: | chr21:32574693-32574961 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 41 |
| Conread position: | 9-299 |
| Cow position: | chr21:10673098-10673380 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 202, 45 |
| Conread position: | 9-389 |
| Cow position: | chr21:46242267-46241897 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 45 |
| Conread position: | 10-222 |
| Cow position: | chr21:17183894-17184094 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 10-222 |
| Cow position: | chr21:47764144-47763941 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 54 |
| Conread position: | 10-291 |
| Cow position: | chr21:20152925-20153220 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 123, 63 |
| Conread position: | 10-293 |
| Cow position: | chr21:29978789-29978511 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 230, 62 |
| Conread position: | 11-269 |
| Cow position: | chr21:37718472-37718229 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 11-291 |
| Cow position: | chr21:39509417-39509145 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 11-292 |
| Cow position: | chr21:26753468-26753732 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 12-168 |
| Cow position: | chr21:11360012-11360160 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 12-169 |
| Cow position: | chr21:13840298-13840452 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 85, 57 |
| Conread position: | 12-170 |
| Cow position: | chr21:17929865-17929711 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 12-192 |
| Cow position: | chr21:30607116-30606939 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-199 |
| Cow position: | chr21:41878444-41878623 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-207 |
| Cow position: | chr21:47363765-47363572 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 12-216 |
| Cow position: | chr21:734569-734760 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-218 |
| Cow position: | chr21:42841627-42841424 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 12-221 |
| Cow position: | chr21:7377954-7377750 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 12-221 |
| Cow position: | chr21:20160651-20160852 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-222 |
| Cow position: | chr21:47010-47217 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 12-222 |
| Cow position: | chr21:25382987-25383203 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 162 |
| Conread position: | 12-222 |
| Cow position: | chr21:40266097-40266298 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-222 |
| Cow position: | chr21:42007490-42007285 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-223 |
| Cow position: | chr21:16152409-16152618 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 12-224 |
| Cow position: | chr21:18790586-18790387 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-224 |
| Cow position: | chr21:37345124-37344922 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-234 |
| Cow position: | chr21:24698453-24698669 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 12-246 |
| Cow position: | chr21:33562987-33563203 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 12-246 |
| Cow position: | chr21:36795573-36795805 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 12-254 |
| Cow position: | chr21:10410193-10410430 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 81 |
| Conread position: | 12-259 |
| Cow position: | chr21:23786003-23786243 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 12-261 |
| Cow position: | chr21:471650-471890 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 230, 49 |
| Conread position: | 12-264 |
| Cow position: | chr21:34565239-34564997 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 12-269 |
| Cow position: | chr21:35997147-35997394 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 12-277 |
| Cow position: | chr21:3361040-3360767 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 12-286 |
| Cow position: | chr21:49649604-49649855 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 12-291 |
| Cow position: | chr21:1511264-1511549 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 12-291 |
| Cow position: | chr21:23586853-23587135 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 212, 70 |
| Conread position: | 12-291 |
| Cow position: | chr21:28810287-28810012 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 12-291 |
| Cow position: | chr21:32339764-32339482 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 211, 57 |
| Conread position: | 12-293 |
| Cow position: | chr21:5426914-5427192 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 182, 62 |
| Conread position: | 12-293 |
| Cow position: | chr21:31662438-31662712 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 12-293 |
| Cow position: | chr21:42209658-42209380 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 196, 66 |
| Conread position: | 12-298 |
| Cow position: | chr21:4098843-4099117 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 12-300 |
| Cow position: | chr21:25286487-25286767 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 12-301 |
| Cow position: | chr21:957645-957941 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 210, 66 |
| Conread position: | 12-301 |
| Cow position: | chr21:12461997-12461696 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 207, 112 |
| Conread position: | 12-301 |
| Cow position: | chr21:33947277-33947001 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 12-301 |
| Cow position: | chr21:47715570-47715291 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 12-302 |
| Cow position: | chr21:6997913-6998217 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 12-306 |
| Cow position: | chr21:20418711-20418428 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 12-313 |
| Cow position: | chr21:10823540-10823826 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 276, 57 |
| Conread position: | 12-313 |
| Cow position: | chr21:28919551-28919247 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 12-337 |
| Cow position: | chr21:33997254-33996945 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 13-189 |
| Cow position: | chr21:38774159-38774333 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 13-192 |
| Cow position: | chr21:34391001-34390828 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-220 |
| Cow position: | chr21:42414127-42413922 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 13-222 |
| Cow position: | chr21:1059052-1059251 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-222 |
| Cow position: | chr21:10538276-10538078 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 13-222 |
| Cow position: | chr21:36909909-36910108 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 13-292 |
| Cow position: | chr21:28244443-28244731 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 13-296 |
| Cow position: | chr21:37121260-37120962 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 177 |
| Conread position: | 13-297 |
| Cow position: | chr21:31661979-31662250 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 13-299 |
| Cow position: | chr21:6316189-6316465 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 13-299 |
| Cow position: | chr21:21181151-21181429 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 13-310 |
| Cow position: | chr21:38900752-38901044 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 13-314 |
| Cow position: | chr21:36371460-36371747 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-320 |
| Cow position: | chr21:38720226-38720542 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 211, 45 |
| Conread position: | 18-190 |
| Cow position: | chr21:36789770-36789940 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 18-222 |
| Cow position: | chr21:395849-396044 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 18-223 |
| Cow position: | chr21:13365317-13365520 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 18-230 |
| Cow position: | chr21:15584441-15584234 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 18-239 |
| Cow position: | chr21:6051486-6051697 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-251 |
| Cow position: | chr21:41621103-41621330 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 18-292 |
| Cow position: | chr21:40134139-40134410 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 197, 43 |
| Conread position: | 18-293 |
| Cow position: | chr21:8206747-8207022 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 18-293 |
| Cow position: | chr21:17428481-17428743 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 18-293 |
| Cow position: | chr21:22353252-22352990 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 18-293 |
| Cow position: | chr21:37235364-37235628 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 18-298 |
| Cow position: | chr21:39528496-39528760 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 165, 33 |
| Conread position: | 18-299 |
| Cow position: | chr21:13358304-13358580 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 18-301 |
| Cow position: | chr21:44214103-44214383 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 18-311 |
| Cow position: | chr21:15742112-15741821 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 19-222 |
| Cow position: | chr21:28733934-28733736 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 19-229 |
| Cow position: | chr21:12801772-12801562 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 106 |
| Conread position: | 19-289 |
| Cow position: | chr21:15239263-15239519 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 19-292 |
| Cow position: | chr21:6387980-6388237 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 19-293 |
| Cow position: | chr21:13737034-13737294 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 20-207 |
| Cow position: | chr21:13585073-13584899 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 20-207 |
| Cow position: | chr21:19258805-19258980 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 20-223 |
| Cow position: | chr21:30256289-30256096 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 20-283 |
| Cow position: | chr21:12087572-12087832 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 25 |
| Conread position: | 20-287 |
| Cow position: | chr21:21223268-21223521 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 20-287 |
| Cow position: | chr21:31159384-31159645 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 206, 46 |
| Conread position: | 20-291 |
| Cow position: | chr21:4276615-4276359 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 20-293 |
| Cow position: | chr21:18941851-18941587 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 20-295 |
| Cow position: | chr21:47714024-47713761 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 213, 53 |
| Conread position: | 20-300 |
| Cow position: | chr21:12301535-12301258 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 20-308 |
| Cow position: | chr21:25764613-25764896 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 21-222 |
| Cow position: | chr21:17643001-17642809 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 23-297 |
| Cow position: | chr21:47823292-47823011 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 24-222 |
| Cow position: | chr21:3585382-3585191 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 24-287 |
| Cow position: | chr21:34739827-34740085 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 54 |
| Conread position: | 28-251 |
| Cow position: | chr21:38918192-38918404 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 213, 34 |
| Conread position: | 32-293 |
| Cow position: | chr21:7768427-7768691 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 44-299 |
| Cow position: | chr21:40769295-40769538 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 45-299 |
| Cow position: | chr21:31576501-31576741 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 243, 36 |
| Conread position: | 61-311 |
| Cow position: | chr21:18135853-18135605 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 164, 54 |
| Conread position: | 63-292 |
| Cow position: | chr21:37838043-37837814 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 161, 15 |
| Conread position: | 63-293 |
| Cow position: | chr21:6696996-6696771 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 66-298 |
| Cow position: | chr21:7483325-7483103 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 68-258 |
| Cow position: | chr21:34159977-34160159 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 70-349 |
| Cow position: | chr21:7823387-7823651 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 74-222 |
| Cow position: | chr21:30119726-30119871 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 75-252 |
| Cow position: | chr21:40475533-40475704 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 115-302 |
| Cow position: | chr21:30150171-30149988 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 117-293 |
| Cow position: | chr21:26147150-26147324 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 123-291 |
| Cow position: | chr21:43642617-43642781 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 130-301 |
| Cow position: | chr21:6945460-6945633 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 132-291 |
| Cow position: | chr21:44220451-44220610 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 132-293 |
| Cow position: | chr21:49661747-49661594 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 132-314 |
| Cow position: | chr21:43344984-43345160 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 137-299 |
| Cow position: | chr21:6012820-6012661 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 140-287 |
| Cow position: | chr21:19158221-19158072 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 37 |
Show alignments to all cow chromosomes.