Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 12

Conread position: 4-298
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 7-287
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 8-165
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 8-222
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 206, 42

Conread position: 8-252
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 8-292
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 8-293
Cow position:
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 8-295
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 108

Conread position: 8-299
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 63, 74

Conread position: 8-301
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 166, 118

Conread position: 10-208
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 59

Conread position: 10-316
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 218, 28

Conread position: 11-193
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 47

Conread position: 12-165
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 12-178
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 49

Conread position: 12-204
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 12-214
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 12-221
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 12-222
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 107

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 52

Conread position: 12-222
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 12

Conread position: 12-222
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 123, 104

Conread position: 12-223
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 121, 59

Conread position: 12-223
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 12-237
Cow position:
Alignm length: 226
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 12-245
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 12-251
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 111

Conread position: 12-252
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 12-252
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 80

Conread position: 12-264
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 40

Conread position: 12-278
Cow position:
Alignm length: 269
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 105

Conread position: 12-287
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 12-292
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 75

Conread position: 12-292
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 60

Conread position: 12-293
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 12-296
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 122, 47

Conread position: 12-297
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 195, 24

Conread position: 12-298
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 155, 49

Conread position: 12-301
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 120, 47

Conread position: 12-303
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 215, 55

Conread position: 12-305
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 14

Conread position: 12-306
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 67

Conread position: 12-308
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 66

Conread position: 12-314
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 104

Conread position: 12-315
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 168, 81

Conread position: 13-222
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 13-224
Cow position:
Alignm length: 213
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 114

Conread position: 13-224
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 46

Conread position: 13-233
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 132

Conread position: 13-261
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 81

Conread position: 13-278
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 245, 46

Conread position: 13-291
Cow position:
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 25

Conread position: 13-300
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 107

Conread position: 13-307
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 286, 79

Conread position: 15-252
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 159

Conread position: 17-222
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 18-207
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 18-222
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 193, 51

Conread position: 18-222
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 18-223
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 59

Conread position: 18-226
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 65

Conread position: 18-265
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 118, 22

Conread position: 18-272
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 55

Conread position: 18-290
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 14

Conread position: 18-293
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 186, 80

Conread position: 20-223
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 20-257
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 105

Conread position: 20-277
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 96

Conread position: 20-278
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 116, 16

Conread position: 20-292
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 58

Conread position: 20-293
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 20-293
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 204, 55

Conread position: 20-297
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 97

Conread position: 20-297
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 71

Conread position: 20-316
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 99

Conread position: 22-226
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 166, 47

Conread position: 23-287
Cow position:
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 26-252
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 33

Conread position: 26-364
Cow position:
Alignm length: 360
Alignm identity: 242
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 71, 90

Conread position: 28-317
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 33

Conread position: 32-277
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 32-317
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 103, 43

Conread position: 34-318
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 11

Conread position: 38-277
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 36

Conread position: 38-287
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 16

Conread position: 48-220
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 21

Conread position: 54-317
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 40, 7

Conread position: 62-290
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 71, 54

Conread position: 62-322
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 66

Conread position: 63-317
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 59

Conread position: 77-318
Cow position:
Alignm length: 242
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 78-286
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 126, 35

Conread position: 78-290
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 78-295
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 35

Conread position: 79-383
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 41

Conread position: 85-293
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 35

Conread position: 91-356
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 197, 34

Conread position: 94-293
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 26

Conread position: 110-298
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 113-298
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 60

Conread position: 118-291
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 55

Conread position: 122-289
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 51

Conread position: 132-293
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 40

Conread position: 132-300
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 162, 44

Conread position: 134-295
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 154, 38

Conread position: 145-291
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 172-301
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 66

Show alignments to all cow chromosomes.