Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 3-277
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 260, 52

Conread position: 3-287
Cow position:
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 118

Conread position: 4-209
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 113

Conread position: 5-389
Cow position:
Alignm length: 389
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 228, 68

Conread position: 7-192
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 111

Conread position: 7-220
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 117

Conread position: 7-223
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 7-252
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 237, 10

Conread position: 7-287
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 87, 47

Conread position: 7-297
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 7-298
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 13

Conread position: 8-118
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 8-178
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 8-222
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 75

Conread position: 8-287
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 21

Conread position: 8-292
Cow position:
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 72

Conread position: 8-300
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 71

Conread position: 10-222
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 11-278
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 240, 21

Conread position: 11-293
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 217, 23

Conread position: 12-150
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 57

Conread position: 12-200
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 12-203
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 99

Conread position: 12-204
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 12-207
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 12-222
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 63

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 49

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 65

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 12-253
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 49

Conread position: 12-260
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 80

Conread position: 12-270
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 121, 110

Conread position: 12-287
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 67

Conread position: 12-289
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 82, 20

Conread position: 12-291
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 191, 70

Conread position: 12-292
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 124, 49

Conread position: 12-292
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 12-293
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 12-293
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 57

Conread position: 12-294
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 46

Conread position: 12-297
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 211, 61

Conread position: 12-299
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 12-301
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 45

Conread position: 12-310
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 61

Conread position: 12-314
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 12-320
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 33

Conread position: 12-352
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 211, 65

Conread position: 13-214
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 28

Conread position: 13-222
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 115

Conread position: 13-293
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 211, 81

Conread position: 13-299
Cow position:
Alignm length: 287
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 17-278
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 187, 103

Conread position: 17-305
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 120, 15

Conread position: 17-305
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 187, 52

Conread position: 18-220
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 115, 62

Conread position: 18-222
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 194, 18

Conread position: 18-222
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 23

Conread position: 18-222
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 122, 51

Conread position: 18-224
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 66

Conread position: 18-235
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 60

Conread position: 18-251
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 18-255
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 18-265
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 18-276
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 18-276
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 103

Conread position: 18-289
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 55

Conread position: 18-296
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 98

Conread position: 18-301
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 50

Conread position: 18-304
Cow position:
Alignm length: 293
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 204, 52

Conread position: 20-202
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 20-221
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 195, 102

Conread position: 20-276
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 14

Conread position: 20-287
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 204, 39

Conread position: 20-292
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 34

Conread position: 20-293
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 121, 53

Conread position: 20-299
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 203, 45

Conread position: 21-333
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 57, 67

Conread position: 25-246
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 45

Conread position: 29-278
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 46

Conread position: 46-307
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 196, 69

Conread position: 54-300
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 15

Conread position: 62-291
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 198, 19

Conread position: 63-313
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 18

Conread position: 69-301
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 155, 9

Conread position: 72-286
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 49

Conread position: 72-291
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 73-302
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 47

Conread position: 76-299
Cow position:
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 76-312
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 44

Conread position: 81-223
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 44

Conread position: 102-277
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 102-298
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 104-299
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 7

Conread position: 118-295
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 63

Conread position: 118-304
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 55

Conread position: 122-287
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 38

Conread position: 125-283
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 125-302
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 46

Conread position: 132-296
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 92, 40

Conread position: 132-336
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 152, 40

Conread position: 133-281
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 31

Conread position: 135-281
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 37

Conread position: 138-277
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 169-293
Cow position:
Alignm length: 125
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 189-315
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 196-292
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.