Cow genome map


           Conread name:
           Ss1.1-rcbe22_g17.5
        

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 70
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               159, 71
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               7-223
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               7-223
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               8-170
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               8-224
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               8-224
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               69, 114
               

               Conread position:
               8-281
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 117
               

               Conread position:
               8-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               154, 10
               

               Conread position:
               8-296
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               8-301
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               9-196
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               9-221
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               12-204
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               12-217
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               12-222
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               12-222
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               12-252
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               12-261
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               12-275
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               12-277
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               124, 56
               

               Conread position:
               12-289
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               12-292
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               12-293
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               12-300
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               207, 52
               

               Conread position:
               12-300
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               212, 56
               

               Conread position:
               12-301
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               12-301
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               223, 33
               

               Conread position:
               12-310
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               12-325
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               184, 58
               

               Conread position:
               12-325
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               300, 49
               

               Conread position:
               12-359
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               13-170
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               13-222
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               13-292
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               195, 60
               

               Conread position:
               13-301
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               14-317
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               18-196
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               18-222
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               53, 112
               

               Conread position:
               18-222
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               170, 51
               

               Conread position:
               18-245
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 60
               

               Conread position:
               18-252
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               18-300
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               18-310
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               18-312
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               19-220
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               19-298
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               19-316
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               20-281
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 102
               

               Conread position:
               20-292
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               20-293
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 141
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               20-301
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               116, 78
               

               Conread position:
               21-300
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               24-361
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               26-295
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               187, 79
               

               Conread position:
               29-278
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               30-156
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               32-268
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               44-222
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               74-223
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               81-299
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               91-292
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               94-301
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               101-260
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               101-292
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               111-297
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               115-350
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               116-271
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               122-301
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               122-380
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               125-356
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               132-289
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               152-293
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               153-345
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               169-291
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.