Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 2-278
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 9

Conread position: 2-294
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 22

Conread position: 3-292
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 3-293
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 16, 50

Conread position: 3-293
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 29

Conread position: 5-291
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 56

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 199
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 85, 33

Conread position: 7-202
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 71

Conread position: 7-300
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 160, 46

Conread position: 7-323
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 13

Conread position: 8-222
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 8-222
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 125

Conread position: 8-278
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 72

Conread position: 8-281
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 87

Conread position: 8-281
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 217, 70

Conread position: 8-289
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 216, 70

Conread position: 8-292
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 220, 60

Conread position: 8-300
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 115

Conread position: 8-311
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 70

Conread position: 10-222
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 60

Conread position: 10-298
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 214, 57

Conread position: 10-315
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 183, 43

Conread position: 11-271
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 57

Conread position: 11-277
Cow position:
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 153, 49

Conread position: 11-287
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 7

Conread position: 11-292
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 38

Conread position: 11-319
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 80

Conread position: 12-165
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 77

Conread position: 12-206
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 117

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 202, 20

Conread position: 12-222
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 117

Conread position: 12-222
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 123, 49

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 12-246
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 12-252
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 202, 113

Conread position: 12-252
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 12-252
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 29

Conread position: 12-266
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 192, 61

Conread position: 12-278
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 103

Conread position: 12-278
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 62

Conread position: 12-290
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 207, 113

Conread position: 12-291
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 119

Conread position: 12-292
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 105

Conread position: 12-293
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 184, 42

Conread position: 12-293
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 12-298
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 17

Conread position: 12-300
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 282, 20

Conread position: 12-301
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 49

Conread position: 12-310
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 66

Conread position: 12-384
Cow position:
Alignm length: 382
Alignm identity: 255
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 115

Conread position: 13-165
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 60

Conread position: 13-196
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 54

Conread position: 13-208
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 13-222
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 13-222
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 17

Conread position: 13-288
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 101

Conread position: 13-293
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 60

Conread position: 13-293
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 207, 13

Conread position: 13-297
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 40

Conread position: 13-300
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 120, 25

Conread position: 13-302
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 53

Conread position: 13-311
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 113

Conread position: 13-315
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 110

Conread position: 14-252
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 15-292
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 105

Conread position: 16-189
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 18-209
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 18-265
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 18-275
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 209, 36

Conread position: 18-289
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 62

Conread position: 18-295
Cow position:
Alignm length: 289
Alignm identity: 192
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 54, 110

Conread position: 18-299
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 35, 52

Conread position: 18-300
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 20-178
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 20-238
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 20-277
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 20-291
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 52

Conread position: 20-301
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 113, 96

Conread position: 21-197
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 59

Conread position: 21-301
Cow position:
Alignm length: 287
Alignm identity: 187
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 202, 57

Conread position: 22-290
Cow position:
Alignm length: 269
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 24-229
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 27-314
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 158, 43

Conread position: 28-298
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 88

Conread position: 33-226
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 36

Conread position: 36-286
Cow position:
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 38-252
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 31

Conread position: 45-222
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 49-316
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 29

Conread position: 52-309
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 158, 26

Conread position: 54-289
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 55-341
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 20

Conread position: 61-307
Cow position:
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 33

Conread position: 64-261
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 64-277
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 71-301
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 54

Conread position: 78-298
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 61

Conread position: 81-292
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 34

Conread position: 82-290
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 83-298
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 146, 36

Conread position: 87-278
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 92-300
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 34

Conread position: 94-300
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 129, 31

Conread position: 98-339
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 22

Conread position: 99-281
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 26

Conread position: 106-260
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 5

Conread position: 110-292
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 15

Conread position: 113-319
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 12, 35

Conread position: 118-293
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 124-292
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 22

Conread position: 132-309
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 157, 40

Conread position: 135-299
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 36

Conread position: 137-293
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 141-321
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 18

Conread position: 147-301
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 25

Conread position: 147-359
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 168, 25

Show alignments to all cow chromosomes.