Cow genome map

Conread name: Ss1.1-rcbe22_g17.5

Conread position: 2-276
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 235, 9

Conread position: 2-278
Cow position:
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 106

Conread position: 3-313
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 10, 57

Conread position: 4-302
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 132, 7

Conread position: 5-299
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 5-299
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 117

Conread position: 7-281
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 167, 66

Conread position: 7-292
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 207, 54

Conread position: 7-301
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 61, 80

Conread position: 7-301
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 8-220
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 8-255
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 232, 70

Conread position: 8-300
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 8-301
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 220, 70

Conread position: 8-317
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 172, 69

Conread position: 10-291
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 36

Conread position: 10-295
Cow position:
Alignm length: 289
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 43

Conread position: 11-272
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 11-291
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 53, 21

Conread position: 11-301
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 38

Conread position: 11-330
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 113

Conread position: 12-165
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 114

Conread position: 12-199
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 12-207
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 12-207
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 61

Conread position: 12-222
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 61

Conread position: 12-222
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 42

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 12-223
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 12-223
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 52

Conread position: 12-224
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 12-233
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 12-233
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 6

Conread position: 12-238
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 105

Conread position: 12-244
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 113

Conread position: 12-251
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 114, 61

Conread position: 12-251
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 64

Conread position: 12-252
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 213, 57

Conread position: 12-258
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 59, 112

Conread position: 12-264
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 12-274
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 61, 121

Conread position: 12-281
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 121, 104

Conread position: 12-291
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 216, 49

Conread position: 12-293
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 67

Conread position: 12-294
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 25

Conread position: 12-300
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 65, 108

Conread position: 12-301
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 19

Conread position: 12-301
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 12-317
Cow position:
Alignm length: 309
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 49

Conread position: 13-252
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 228, 65

Conread position: 13-281
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 23

Conread position: 13-301
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 118, 5

Conread position: 13-311
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 48

Conread position: 13-323
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 120, 56

Conread position: 14-222
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 14-375
Cow position:
Alignm length: 370
Alignm identity: 249
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 70

Conread position: 17-207
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 18-170
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 18-204
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 18-217
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 27

Conread position: 18-277
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 18-278
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 18-290
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 10

Conread position: 18-293
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 270, 31

Conread position: 18-300
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 18-301
Cow position:
Alignm length: 284
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 18-309
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 18-312
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 157

Conread position: 18-315
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 34

Conread position: 19-277
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 19-314
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 87, 47

Conread position: 19-320
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 276, 15

Conread position: 19-324
Cow position:
Alignm length: 314
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 61

Conread position: 20-223
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 86

Conread position: 20-270
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 116, 56

Conread position: 20-278
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 90, 25

Conread position: 20-281
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 64

Conread position: 20-285
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 20-293
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 66

Conread position: 20-293
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 20-298
Cow position:
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 25

Conread position: 20-298
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 197, 48

Conread position: 22-292
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 24-222
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 24-223
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 24-234
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 27-292
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 16

Conread position: 30-268
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 169, 49

Conread position: 32-206
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 81

Conread position: 32-297
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 104, 54

Conread position: 37-303
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 79

Conread position: 40-293
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 75

Conread position: 63-298
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 73, 15

Conread position: 74-298
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 150, 8

Conread position: 75-252
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 38

Conread position: 75-278
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 50

Conread position: 75-278
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 41

Conread position: 75-278
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 61, 45

Conread position: 75-292
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 39

Conread position: 85-232
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 13

Conread position: 94-300
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 28

Conread position: 100-298
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 188, 20

Conread position: 102-293
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 23

Conread position: 102-296
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 103-300
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 11, 46

Conread position: 112-287
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 62

Conread position: 118-297
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 64

Conread position: 118-301
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 55

Conread position: 119-291
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 46

Conread position: 132-292
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 152, 32

Conread position: 132-318
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 156, 40

Conread position: 136-316
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 38

Conread position: 138-242
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 138-292
Cow position:
Alignm length: 157
Alignm identity: 130
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 87, 34

Conread position: 139-305
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 27

Conread position: 141-292
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 31

Conread position: 145-359
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 21

Conread position: 151-331
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 148, 20

Show alignments to all cow chromosomes.