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Cow genome map

           
Conread name:
           
Ss1.1-rcbe22_g17.5
        

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:66547876-66547568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr4:36755633-36755853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr4:44451419-44451638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr4:41602742-41603025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
281, 35
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr4:34630789-34630989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr4:40823219-40822943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr4:51122951-51123323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr4:31348292-31348008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr4:13026199-13026509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
127, 107
               

               
Conread position:
               
7-321
               

               
Cow position:
               
chr4:34166080-34165764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
8-157
               

               
Cow position:
               
chr4:21517107-21516961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr4:45583221-45583017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr4:25370016-25370281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
8-292
               

               
Cow position:
               
chr4:52779750-52780037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
184, 56
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr4:961764-961472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr4:3440303-3440586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr4:5913450-5913171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr4:19313909-19314180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr4:22860815-22860534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 94
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr4:19292617-19292912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
8-299
               

               
Cow position:
               
chr4:23166803-23167078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
8-301
               

               
Cow position:
               
chr4:5580455-5580740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
8-301
               

               
Cow position:
               
chr4:29291417-29291707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
220, 60
               

               
Conread position:
               
8-305
               

               
Cow position:
               
chr4:11021756-11021474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
281, 117
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr4:9681200-9681500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 117
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr4:21874709-21874963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
232, 49
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr4:51605715-51605422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr4:36929216-36929526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
219, 60
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr4:44973537-44973722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr4:28399520-28399318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr4:55395661-55395881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr4:45234965-45234703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
11-256
               

               
Cow position:
               
chr4:15623745-15624001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chr4:243129-243387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr4:21862961-21862711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr4:68795395-68795138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
12-165
               

               
Cow position:
               
chr4:58261252-58261100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
12-178
               

               
Cow position:
               
chr4:11331994-11332159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr4:17474341-17474523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr4:31506130-31505938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr4:33030451-33030638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr4:27344773-27344579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
12-217
               

               
Cow position:
               
chr4:27755398-27755203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr4:23445147-23444942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 104
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr4:46591567-46591772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:13222281-13222081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
202, 61
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:32726128-32726330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:37675517-37675719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:39128436-39128643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:44782275-44782480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:45596128-45595926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr4:69543085-69543288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr4:45589697-45589490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr4:65432050-65432268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
191, 66
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr4:46456158-46455934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr4:13327051-13326818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr4:2602134-2602380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr4:31172577-31172832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr4:60897374-60897115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
212, 47
               

               
Conread position:
               
12-281
               

               
Cow position:
               
chr4:52225911-52226166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr4:28151421-28151697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr4:34700136-34699857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr4:40434002-40433737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr4:11897396-11897114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr4:21259118-21259395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr4:65116300-65116022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr4:39767253-39767522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr4:56570709-56570982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
212, 57
               

               
Conread position:
               
12-292
               

               
Cow position:
               
chr4:11610778-11611056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
12-292
               

               
Cow position:
               
chr4:36945294-36945020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr4:19316100-19315814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 53
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr4:21064938-21065218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr4:25972799-25973073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr4:29709862-29709585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr4:44184209-44183920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
206, 88
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr4:23758707-23758981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
191, 104
               

               
Conread position:
               
12-299
               

               
Cow position:
               
chr4:46136653-46136948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
212, 52
               

               
Conread position:
               
12-300
               

               
Cow position:
               
chr4:1374266-1374538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 20
               

               
Conread position:
               
12-300
               

               
Cow position:
               
chr4:56239953-56239664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
206, 56
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr4:6166403-6166131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
12-303
               

               
Cow position:
               
chr4:54146561-54146292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
191, 59
               

               
Conread position:
               
12-314
               

               
Cow position:
               
chr4:16762827-16762524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
212, 113
               

               
Conread position:
               
12-323
               

               
Cow position:
               
chr4:37732581-37732275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
228, 47
               

               
Conread position:
               
12-391
               

               
Cow position:
               
chr4:4321098-4320700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr4:45738576-45738369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 113
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr4:51769014-51769210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
13-254
               

               
Cow position:
               
chr4:38946111-38946352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 118
               

               
Conread position:
               
13-277
               

               
Cow position:
               
chr4:44665467-44665213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr4:21365309-21365565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr4:37880835-37881099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 103
               

               
Conread position:
               
13-297
               

               
Cow position:
               
chr4:22528484-22528209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr4:10992294-10992020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
190, 5
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr4:12560933-12561220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr4:30671506-30671222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
13-315
               

               
Cow position:
               
chr4:34369549-34369250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
211, 56
               

               
Conread position:
               
13-317
               

               
Cow position:
               
chr4:30730-30442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
190, 5
               

               
Conread position:
               
13-318
               

               
Cow position:
               
chr4:41371038-41370722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
13-353
               

               
Cow position:
               
chr4:27997586-27997934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
13-400
               

               
Cow position:
               
chr4:20279239-20279613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr4:21073248-21072980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr4:3837179-3837443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
166, 58
               

               
Conread position:
               
18-221
               

               
Cow position:
               
chr4:20826-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
18-222
               

               
Cow position:
               
chr4:27276637-27276438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
18-222
               

               
Cow position:
               
chr4:32693692-32693894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr4:65265403-65265198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr4:65815797-65815601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
18-224
               

               
Cow position:
               
chr4:20147093-20147291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr4:46477045-46476836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 151
               

               
Conread position:
               
18-252
               

               
Cow position:
               
chr4:44773138-44772908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
18-259
               

               
Cow position:
               
chr4:25888922-25888684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
205, 51
               

               
Conread position:
               
18-278
               

               
Cow position:
               
chr4:20157509-20157255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr4:36813281-36813545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
18-289
               

               
Cow position:
               
chr4:48409362-48409096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
210, 63
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr4:45918943-45919208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr4:51727984-51728272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr4:23494832-23495091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr4:37935376-37935101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
201, 66
               

               
Conread position:
               
18-311
               

               
Cow position:
               
chr4:58834499-58834207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 44
               

               
Conread position:
               
18-394
               

               
Cow position:
               
chr4:45367644-45368020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
240, 104
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr4:19408091-19407892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr4:45636072-45636272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
19-342
               

               
Cow position:
               
chr4:52823500-52823156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
20-192
               

               
Cow position:
               
chr4:39231613-39231446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
20-196
               

               
Cow position:
               
chr4:22345113-22344942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr4:33395791-33395607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr4:37691405-37691212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr4:488514-488321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
20-221
               

               
Cow position:
               
chr4:5460956-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
20-222
               

               
Cow position:
               
chr4:24481760-24481567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
20-222
               

               
Cow position:
               
chr4:59377818-59378015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
20-223
               

               
Cow position:
               
chr4:508998-508802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
20-260
               

               
Cow position:
               
chr4:65841858-65841625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
20-293
               

               
Cow position:
               
chr4:22235238-22235500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
20-293
               

               
Cow position:
               
chr4:44496280-44496555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
201, 104
               

               
Conread position:
               
20-293
               

               
Cow position:
               
chr4:49794576-49794843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr4:35870112-35870382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 96
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr4:65175230-65175040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
22-299
               

               
Cow position:
               
chr4:63472162-63471892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr4:53752435-53752703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
24-260
               

               
Cow position:
               
chr4:40623187-40622960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chr4:19098380-19098578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
31-301
               

               
Cow position:
               
chr4:184212-184472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 85
               

               
Conread position:
               
32-292
               

               
Cow position:
               
chr4:53616749-53617001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr4:35471247-35471503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
256, 62
               

               
Conread position:
               
33-156
               

               
Cow position:
               
chr4:11429937-11430061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
34-264
               

               
Cow position:
               
chr4:58858244-58858026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
36-220
               

               
Cow position:
               
chr4:65650203-65650030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
36-301
               

               
Cow position:
               
chr4:52087853-52088110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
42-293
               

               
Cow position:
               
chr4:22449588-22449347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
44-299
               

               
Cow position:
               
chr4:37035301-37035054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
54-291
               

               
Cow position:
               
chr4:28574213-28573974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
61-293
               

               
Cow position:
               
chr4:38700209-38699982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
62-318
               

               
Cow position:
               
chr4:42232074-42231812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
162, 63
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr4:31758218-31758445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
64-292
               

               
Cow position:
               
chr4:38877713-38877941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr4:33091324-33091552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr4:64029072-64029294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
67-311
               

               
Cow position:
               
chr4:24432935-24433173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
67-329
               

               
Cow position:
               
chr4:44279981-44279725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
68-292
               

               
Cow position:
               
chr4:24187656-24187428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 174
               

               
Conread position:
               
71-223
               

               
Cow position:
               
chr4:5964032-5963883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
72-292
               

               
Cow position:
               
chr4:45871907-45871692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr4:65604507-65604295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
75-223
               

               
Cow position:
               
chr4:12135965-12135819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr4:50687897-50687664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
80-301
               

               
Cow position:
               
chr4:17304426-17304207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 47
               

               
Conread position:
               
83-292
               

               
Cow position:
               
chr4:39616943-39617135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
83-314
               

               
Cow position:
               
chr4:21063820-21063593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
93-299
               

               
Cow position:
               
chr4:63262226-63262024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
100-301
               

               
Cow position:
               
chr4:8083812-8083606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
113-316
               

               
Cow position:
               
chr4:22849495-22849287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr4:51433409-51433583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
119-292
               

               
Cow position:
               
chr4:18956655-18956491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
119-293
               

               
Cow position:
               
chr4:2169070-2169243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
119-299
               

               
Cow position:
               
chr4:10836179-10836357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
121-273
               

               
Cow position:
               
chr4:54797533-54797384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr4:54501017-54500836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
125-293
               

               
Cow position:
               
chr4:45115770-45115604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
125-311
               

               
Cow position:
               
chr4:62411866-62412044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
134-293
               

               
Cow position:
               
chr4:34762315-34762161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
137-305
               

               
Cow position:
               
chr4:44681230-44681055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
138-300
               

               
Cow position:
               
chr4:9800025-9800184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr4:20599959-20600126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
143-303
               

               
Cow position:
               
chr4:62571473-62571627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
154-306
               

               
Cow position:
               
chr4:19558724-19558873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               
Show alignments to all cow chromosomes.