Cow genome map
| Conread name: | Ss1.1-rcbe22_g17.5 |
| Conread position: | 1-242 |
| Cow position: | chr9:4858668-4858434 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-278 |
| Cow position: | chr9:8951036-8950758 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 3-291 |
| Cow position: | chr9:5209709-5209432 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 56 |
| Conread position: | 3-293 |
| Cow position: | chr9:34310155-34309875 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 4-223 |
| Cow position: | chr9:5594629-5594418 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 7-235 |
| Cow position: | chr9:25972627-25972412 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 7-277 |
| Cow position: | chr9:28983309-28983045 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 8-203 |
| Cow position: | chr9:1950043-1949852 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 8-222 |
| Cow position: | chr9:64559761-64559966 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-275 |
| Cow position: | chr9:10127548-10127802 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 72 |
| Conread position: | 8-278 |
| Cow position: | chr9:3932085-3931819 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 125, 71 |
| Conread position: | 8-290 |
| Cow position: | chr9:34468460-34468728 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 189, 37 |
| Conread position: | 8-291 |
| Cow position: | chr9:5399261-5398984 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 8-292 |
| Cow position: | chr9:47869130-47868853 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 8-301 |
| Cow position: | chr9:9823382-9823661 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 69 |
| Conread position: | 8-398 |
| Cow position: | chr9:32115484-32115855 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 9 |
| Conread position: | 9-165 |
| Cow position: | chr9:43013846-43013694 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 9-309 |
| Cow position: | chr9:9315431-9315142 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 134, 69 |
| Conread position: | 10-165 |
| Cow position: | chr9:38344012-38343862 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 10-222 |
| Cow position: | chr9:11319512-11319718 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 10-293 |
| Cow position: | chr9:1916408-1916136 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 10-301 |
| Cow position: | chr9:25469161-25468894 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 11-296 |
| Cow position: | chr9:4861508-4861221 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 124, 105 |
| Conread position: | 11-301 |
| Cow position: | chr9:23042897-23042619 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 12-191 |
| Cow position: | chr9:28726601-28726777 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 12-196 |
| Cow position: | chr9:43937059-43936887 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 12-198 |
| Cow position: | chr9:7409897-7409703 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 124 |
| Conread position: | 12-199 |
| Cow position: | chr9:8534571-8534751 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-199 |
| Cow position: | chr9:24997400-24997578 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 12-205 |
| Cow position: | chr9:3220256-3220069 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-207 |
| Cow position: | chr9:19493343-19493535 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 12-207 |
| Cow position: | chr9:33598100-33597917 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-220 |
| Cow position: | chr9:38846224-38846415 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 12-221 |
| Cow position: | chr9:50080927-50081123 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 12-222 |
| Cow position: | chr9:9461536-9461738 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 128, 61 |
| Conread position: | 12-222 |
| Cow position: | chr9:19714194-19713996 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 12-222 |
| Cow position: | chr9:41283133-41282931 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-223 |
| Cow position: | chr9:21888286-21888085 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 12-236 |
| Cow position: | chr9:3774280-3774067 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 12-246 |
| Cow position: | chr9:8901104-8901333 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 12-249 |
| Cow position: | chr9:34106841-34106604 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 12-252 |
| Cow position: | chr9:26086181-26085941 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 12-255 |
| Cow position: | chr9:6840121-6839878 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 118 |
| Conread position: | 12-255 |
| Cow position: | chr9:42445860-42446102 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 211, 113 |
| Conread position: | 12-272 |
| Cow position: | chr9:17310443-17310699 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 12-278 |
| Cow position: | chr9:4630224-4629952 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 12-278 |
| Cow position: | chr9:32848011-32847751 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 12-287 |
| Cow position: | chr9:16745795-16745534 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 12-287 |
| Cow position: | chr9:51720783-51721053 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 211, 57 |
| Conread position: | 12-291 |
| Cow position: | chr9:3169401-3169669 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 12-291 |
| Cow position: | chr9:15684665-15684938 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 12-292 |
| Cow position: | chr9:8599719-8599454 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 33 |
| Conread position: | 12-292 |
| Cow position: | chr9:39428677-39428952 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 12-292 |
| Cow position: | chr9:42264326-42264050 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 12-293 |
| Cow position: | chr9:6851949-6852223 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 200, 66 |
| Conread position: | 12-293 |
| Cow position: | chr9:43871098-43870824 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 12-295 |
| Cow position: | chr9:41679865-41679588 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 200, 58 |
| Conread position: | 12-295 |
| Cow position: | chr9:52407286-52407017 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-297 |
| Cow position: | chr9:33059162-33059429 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 12-298 |
| Cow position: | chr9:5433757-5433468 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 12-299 |
| Cow position: | chr9:10666906-10667179 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 12-299 |
| Cow position: | chr9:26403904-26403617 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 12-300 |
| Cow position: | chr9:1867569-1867289 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 209, 57 |
| Conread position: | 12-301 |
| Cow position: | chr9:5500977-5500683 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 12-301 |
| Cow position: | chr9:11123363-11123660 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 66 |
| Conread position: | 12-311 |
| Cow position: | chr9:22318470-22318172 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 175, 59 |
| Conread position: | 12-314 |
| Cow position: | chr9:39152559-39152852 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 12-317 |
| Cow position: | chr9:50544508-50544815 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 96, 159 |
| Conread position: | 12-321 |
| Cow position: | chr9:9199660-9199969 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 13-217 |
| Cow position: | chr9:47906162-47906358 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 13-224 |
| Cow position: | chr9:31557611-31557813 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 13-235 |
| Cow position: | chr9:21462748-21462962 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 13-238 |
| Cow position: | chr9:34284066-34283854 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 13-238 |
| Cow position: | chr9:35105671-35105890 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 56 |
| Conread position: | 13-272 |
| Cow position: | chr9:14184783-14184538 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 13-272 |
| Cow position: | chr9:54528629-54528381 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 211, 7 |
| Conread position: | 13-276 |
| Cow position: | chr9:15034023-15033772 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 13-277 |
| Cow position: | chr9:32817020-32817277 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 120, 103 |
| Conread position: | 13-278 |
| Cow position: | chr9:22443509-22443780 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 210, 58 |
| Conread position: | 13-293 |
| Cow position: | chr9:18110748-18111014 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 13-293 |
| Cow position: | chr9:28947973-28947714 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 13-301 |
| Cow position: | chr9:20897018-20896739 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 13-308 |
| Cow position: | chr9:30020087-30019813 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 275, 49 |
| Conread position: | 13-316 |
| Cow position: | chr9:8998475-8998158 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 82, 116 |
| Conread position: | 13-316 |
| Cow position: | chr9:43912045-43911753 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 13-317 |
| Cow position: | chr9:32266278-32266563 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 13-333 |
| Cow position: | chr9:33114465-33114146 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 211, 44 |
| Conread position: | 13-365 |
| Cow position: | chr9:11168848-11168507 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 210, 59 |
| Conread position: | 17-293 |
| Cow position: | chr9:19903194-19902919 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 18-221 |
| Cow position: | chr9:17411078-17411276 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 18-222 |
| Cow position: | chr9:64064247-64064447 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 18-252 |
| Cow position: | chr9:51566381-51566608 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 18-281 |
| Cow position: | chr9:388903-389157 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 18-307 |
| Cow position: | chr9:49651837-49651564 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 18-308 |
| Cow position: | chr9:29808570-29808288 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 118, 102 |
| Conread position: | 18-323 |
| Cow position: | chr9:33668843-33668549 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 18-329 |
| Cow position: | chr9:14961064-14960764 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 18-350 |
| Cow position: | chr9:38941318-38941646 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 19-222 |
| Cow position: | chr9:45171106-45171307 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 107 |
| Conread position: | 20-148 |
| Cow position: | chr9:20961169-20961291 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 20-205 |
| Cow position: | chr9:49417098-49416920 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 20-221 |
| Cow position: | chr9:45756478-45756280 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 20-222 |
| Cow position: | chr9:43443913-43443720 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 163, 52 |
| Conread position: | 20-261 |
| Cow position: | chr9:16118838-16118606 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 237, 53 |
| Conread position: | 20-291 |
| Cow position: | chr9:58669486-58669230 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 20-293 |
| Cow position: | chr9:34204243-34203976 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 20-293 |
| Cow position: | chr9:34725399-34725661 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 20-293 |
| Cow position: | chr9:56861119-56860863 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 20-295 |
| Cow position: | chr9:25557083-25556809 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 20-295 |
| Cow position: | chr9:43037595-43037326 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 20-298 |
| Cow position: | chr9:2888095-2887815 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 20-299 |
| Cow position: | chr9:9311972-9311681 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 204, 52 |
| Conread position: | 21-278 |
| Cow position: | chr9:8723905-8723638 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 202, 17 |
| Conread position: | 21-278 |
| Cow position: | chr9:54206213-54206463 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 21-292 |
| Cow position: | chr9:3959171-3958917 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 21-311 |
| Cow position: | chr9:27292165-27292448 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 22-206 |
| Cow position: | chr9:28754929-28754749 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 22-221 |
| Cow position: | chr9:5245971-5245770 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 22-255 |
| Cow position: | chr9:15951043-15951275 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 23-251 |
| Cow position: | chr9:42062210-42061986 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 23-254 |
| Cow position: | chr9:4580301-4580524 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 205, 47 |
| Conread position: | 24-318 |
| Cow position: | chr9:5327363-5327067 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 200, 29 |
| Conread position: | 31-293 |
| Cow position: | chr9:4538756-4539012 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 105, 89 |
| Conread position: | 36-292 |
| Cow position: | chr9:63597929-63597685 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 38-205 |
| Cow position: | chr9:13761196-13761032 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 38-278 |
| Cow position: | chr9:25400103-25400344 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 40-317 |
| Cow position: | chr9:38289233-38289488 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 42-297 |
| Cow position: | chr9:20200383-20200143 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 45-293 |
| Cow position: | chr9:17110858-17110620 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 45-293 |
| Cow position: | chr9:40007945-40007709 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 24 |
| Conread position: | 47-293 |
| Cow position: | chr9:24429008-24429249 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 179, 78 |
| Conread position: | 48-287 |
| Cow position: | chr9:7805879-7806120 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 173, 18 |
| Conread position: | 54-291 |
| Cow position: | chr9:41785289-41785051 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 122, 18 |
| Conread position: | 63-264 |
| Cow position: | chr9:24837607-24837412 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 193, 58 |
| Conread position: | 67-286 |
| Cow position: | chr9:47931180-47930966 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 67-300 |
| Cow position: | chr9:12499077-12498847 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 70-252 |
| Cow position: | chr9:47214481-47214659 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 170, 8 |
| Conread position: | 72-297 |
| Cow position: | chr9:35100952-35100731 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 216, 53 |
| Conread position: | 72-301 |
| Cow position: | chr9:20839688-20839467 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 75-317 |
| Cow position: | chr9:44584652-44584406 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 76-297 |
| Cow position: | chr9:41958727-41958936 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 77-300 |
| Cow position: | chr9:5756931-5757157 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 78-301 |
| Cow position: | chr9:33347433-33347661 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 143, 47 |
| Conread position: | 78-301 |
| Cow position: | chr9:48017038-48016809 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 81-293 |
| Cow position: | chr9:27347850-27347646 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 147, 40 |
| Conread position: | 86-300 |
| Cow position: | chr9:26559563-26559774 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 165, 39 |
| Conread position: | 91-311 |
| Cow position: | chr9:35708579-35708788 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 98-253 |
| Cow position: | chr9:38777024-38777179 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 101-293 |
| Cow position: | chr9:38580889-38580705 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 117-293 |
| Cow position: | chr9:34917166-34917349 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 15 |
| Conread position: | 118-293 |
| Cow position: | chr9:60549391-60549566 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 118-299 |
| Cow position: | chr9:27052616-27052793 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 122-281 |
| Cow position: | chr9:53794513-53794669 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 122-316 |
| Cow position: | chr9:33999130-33999321 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 126-292 |
| Cow position: | chr9:45510741-45510900 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 126-308 |
| Cow position: | chr9:4256975-4257166 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 128-300 |
| Cow position: | chr9:62330988-62331158 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 132-281 |
| Cow position: | chr9:48634895-48635044 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 132-300 |
| Cow position: | chr9:34431825-34431660 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 135-271 |
| Cow position: | chr9:31047152-31047018 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 139-352 |
| Cow position: | chr9:36827696-36827487 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 149, 25 |
| Conread position: | 175-300 |
| Cow position: | chr9:43944529-43944653 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 175-302 |
| Cow position: | chr9:50001679-50001553 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.