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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_002410.5.5
        

               
Conread position:
               
88-460
               

               
Cow position:
               
chr12:29018105-29017736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
88-560
               

               
Cow position:
               
chr12:39486609-39486145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr12:9766690-9767000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
92-557
               

               
Cow position:
               
chr12:34473433-34473897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
97-560
               

               
Cow position:
               
chr12:34148165-34148636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
98-548
               

               
Cow position:
               
chr12:6720517-6720047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
103-500
               

               
Cow position:
               
chr12:33129434-33129039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
103-571
               

               
Cow position:
               
chr12:44622525-44622062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
106-560
               

               
Cow position:
               
chr12:7884502-7884940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
111-566
               

               
Cow position:
               
chr12:14131597-14132035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
131-560
               

               
Cow position:
               
chr12:8075544-8075979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
131-560
               

               
Cow position:
               
chr12:18021014-18020567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 75
               

               
Conread position:
               
133-560
               

               
Cow position:
               
chr12:31960042-31959608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
137-357
               

               
Cow position:
               
chr12:46463921-46464135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr12:17774908-17774546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
175-556
               

               
Cow position:
               
chr12:25321023-25320642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
176-572
               

               
Cow position:
               
chr12:3510667-3510267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
177-514
               

               
Cow position:
               
chr12:27037343-27037687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
177-561
               

               
Cow position:
               
chr12:32715157-32714755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
180-572
               

               
Cow position:
               
chr12:4341640-4342019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
234, 47
               

               
Conread position:
               
187-576
               

               
Cow position:
               
chr12:43942566-43942178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
189-479
               

               
Cow position:
               
chr12:36544543-36544857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
189-560
               

               
Cow position:
               
chr12:8943121-8943505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
189-577
               

               
Cow position:
               
chr12:6410639-6411031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
191-552
               

               
Cow position:
               
chr12:42602151-42602517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
205, 26
               

               
Conread position:
               
191-559
               

               
Cow position:
               
chr12:45820273-45820641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
191-571
               

               
Cow position:
               
chr12:3950247-3950647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
192-365
               

               
Cow position:
               
chr12:17252107-17252274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
193-362
               

               
Cow position:
               
chr12:12232973-12232810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
193-367
               

               
Cow position:
               
chr12:5839564-5839736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr12:16670361-16670145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
193-459
               

               
Cow position:
               
chr12:6485121-6485395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
193-560
               

               
Cow position:
               
chr12:5631792-5632159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 8
               

               
Conread position:
               
193-569
               

               
Cow position:
               
chr12:20479243-20479607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
194-535
               

               
Cow position:
               
chr12:5635363-5635708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
194-560
               

               
Cow position:
               
chr12:6241409-6241024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
195-396
               

               
Cow position:
               
chr12:18582904-18583099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
195-410
               

               
Cow position:
               
chr12:37169856-37170063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
195-560
               

               
Cow position:
               
chr12:18123758-18123402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
195-560
               

               
Cow position:
               
chr12:42967083-42966716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
173, 35
               

               
Conread position:
               
195-564
               

               
Cow position:
               
chr12:25561458-25561081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
196-577
               

               
Cow position:
               
chr12:47929288-47928911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
197-396
               

               
Cow position:
               
chr12:15089608-15089407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr12:18518764-18518386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
203-539
               

               
Cow position:
               
chr12:15122407-15122072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
205-556
               

               
Cow position:
               
chr12:42167711-42167365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
179, 20
               

               
Conread position:
               
206-560
               

               
Cow position:
               
chr12:33323417-33323783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
193, 14
               

               
Conread position:
               
206-571
               

               
Cow position:
               
chr12:26222907-26223281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
151, 114
               

               
Conread position:
               
206-577
               

               
Cow position:
               
chr12:17031693-17031318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
204, 13
               

               
Conread position:
               
206-577
               

               
Cow position:
               
chr12:17080344-17079955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
209-560
               

               
Cow position:
               
chr12:5714707-5714344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
209-560
               

               
Cow position:
               
chr12:27802975-27803334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
150, 7
               

               
Conread position:
               
210-556
               

               
Cow position:
               
chr12:24116284-24116621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
140, 119
               

               
Conread position:
               
212-553
               

               
Cow position:
               
chr12:42879772-42879429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 277
               

               
Conread position:
               
212-560
               

               
Cow position:
               
chr12:25805055-25805395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 108
               

               
Conread position:
               
217-560
               

               
Cow position:
               
chr12:3056206-3055851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
220-410
               

               
Cow position:
               
chr12:19507706-19507511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
220-560
               

               
Cow position:
               
chr12:11056945-11056591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
220-566
               

               
Cow position:
               
chr12:26777120-26777443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr12:3371478-3371655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
141, 61
               

               
Conread position:
               
221-408
               

               
Cow position:
               
chr12:17269870-17269681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr12:46120764-46120950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
221-541
               

               
Cow position:
               
chr12:25177530-25177860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
156, 86
               

               
Conread position:
               
221-548
               

               
Cow position:
               
chr12:39465647-39465305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
221-555
               

               
Cow position:
               
chr12:2813295-2812943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
221-559
               

               
Cow position:
               
chr12:19502360-19502704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr12:6488925-6489261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
134, 69
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr12:30605098-30605441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr12:30745784-30745428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
221-564
               

               
Cow position:
               
chr12:32169608-32169246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 87
               

               
Conread position:
               
221-566
               

               
Cow position:
               
chr12:30590835-30590485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
221-567
               

               
Cow position:
               
chr12:44595742-44596106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
177, 356
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr12:30170736-30170369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr12:44905695-44905339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
221-577
               

               
Cow position:
               
chr12:30805926-30805552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
221-600
               

               
Cow position:
               
chr12:19869528-19869143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
222-555
               

               
Cow position:
               
chr12:30919492-30919152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 230
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr12:28582443-28582777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
222-571
               

               
Cow position:
               
chr12:9229433-9229779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 165
               

               
Conread position:
               
222-572
               

               
Cow position:
               
chr12:31429504-31429858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 88
               

               
Conread position:
               
223-569
               

               
Cow position:
               
chr12:19691169-19691530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 5
               

               
Conread position:
               
224-560
               

               
Cow position:
               
chr12:41084121-41083781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
166, 118
               

               
Conread position:
               
225-491
               

               
Cow position:
               
chr12:25917213-25917483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
225-554
               

               
Cow position:
               
chr12:15429532-15429879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
226-577
               

               
Cow position:
               
chr12:9143450-9143089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 118
               

               
Conread position:
               
227-567
               

               
Cow position:
               
chr12:19124776-19125119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
228-389
               

               
Cow position:
               
chr12:37514220-37514382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
228-408
               

               
Cow position:
               
chr12:19261257-19261074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
228-447
               

               
Cow position:
               
chr12:15703437-15703673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
228-519
               

               
Cow position:
               
chr12:29770518-29770817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
228-535
               

               
Cow position:
               
chr12:5940402-5940083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 270
               

               
Conread position:
               
228-541
               

               
Cow position:
               
chr12:18943597-18943910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 141
               

               
Conread position:
               
228-548
               

               
Cow position:
               
chr12:37770931-37770602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
228-549
               

               
Cow position:
               
chr12:18572685-18572367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 93
               

               
Conread position:
               
228-555
               

               
Cow position:
               
chr12:29969640-29969295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
169, 136
               

               
Conread position:
               
228-557
               

               
Cow position:
               
chr12:42698185-42698506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
162, 66
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr12:15531115-15530780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr12:41474150-41473810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 250
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr12:42181068-42181426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 239
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr12:5906117-5905766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 229
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr12:17881922-17881577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
165, 136
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr12:8868821-8869179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
228-572
               

               
Cow position:
               
chr12:11836295-11835944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
130, 266
               

               
Conread position:
               
228-575
               

               
Cow position:
               
chr12:18577901-18577549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 233
               

               
Conread position:
               
228-639
               

               
Cow position:
               
chr12:34465943-34466365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
114, 218
               

               
Conread position:
               
229-410
               

               
Cow position:
               
chr12:3092520-3092693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
229-560
               

               
Cow position:
               
chr12:46314644-46314980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
230-410
               

               
Cow position:
               
chr12:47193965-47194140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
232-560
               

               
Cow position:
               
chr12:17001315-17000973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 111
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr12:4008236-4008568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
149, 89
               

               
Conread position:
               
243-539
               

               
Cow position:
               
chr12:6469012-6469308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
6, 155
               

               
Conread position:
               
243-568
               

               
Cow position:
               
chr12:36313898-36313571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 175
               

               
Conread position:
               
246-410
               

               
Cow position:
               
chr12:18023382-18023554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 158
               

               
Conread position:
               
246-567
               

               
Cow position:
               
chr12:16543537-16543860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
246-570
               

               
Cow position:
               
chr12:31532361-31532697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
246-577
               

               
Cow position:
               
chr12:17717108-17716780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
257-521
               

               
Cow position:
               
chr12:24211439-24211170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
156, 28
               

               
Conread position:
               
257-523
               

               
Cow position:
               
chr12:13156700-13156427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr12:7000572-7000874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
204, 11
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr12:16605641-16605931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr12:22285090-22285385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 102
               

               
Conread position:
               
257-562
               

               
Cow position:
               
chr12:18388257-18388569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
258-519
               

               
Cow position:
               
chr12:18103581-18103839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
258-551
               

               
Cow position:
               
chr12:30661919-30662226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
138, 97
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr12:6210127-6210442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
118, 95
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr12:7978068-7977762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr12:10895522-10895833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 184
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr12:35368673-35368358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
135, 227
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr12:40910254-40910575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 220
               

               
Conread position:
               
258-566
               

               
Cow position:
               
chr12:37993701-37994016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
96, 293
               

               
Conread position:
               
258-569
               

               
Cow position:
               
chr12:24559389-24559057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
258-581
               

               
Cow position:
               
chr12:27055637-27055301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
258-620
               

               
Cow position:
               
chr12:12198881-12199254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 233
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr12:35669440-35669703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 237
               

               
Conread position:
               
259-560
               

               
Cow position:
               
chr12:20776894-20777214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
260-541
               

               
Cow position:
               
chr12:12331481-12331767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
261-552
               

               
Cow position:
               
chr12:15783949-15783656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
166, 76
               

               
Conread position:
               
261-552
               

               
Cow position:
               
chr12:42160531-42160834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
85, 137
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr12:19508531-19508856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr12:3076599-3076908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr12:10462018-10461721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr12:15358368-15358043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr12:17270562-17270258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 104
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr12:20316503-20316791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
165, 92
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr12:43789052-43788745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
261-561
               

               
Cow position:
               
chr12:3472970-3473276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 210
               

               
Conread position:
               
261-561
               

               
Cow position:
               
chr12:18040580-18040878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 104
               

               
Conread position:
               
261-566
               

               
Cow position:
               
chr12:41091561-41091237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
261-567
               

               
Cow position:
               
chr12:26868786-26869088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
261-567
               

               
Cow position:
               
chr12:43476376-43476062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
261-570
               

               
Cow position:
               
chr12:45160491-45160807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr12:41217094-41216761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
261-579
               

               
Cow position:
               
chr12:36118993-36118666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
146, 113
               

               
Conread position:
               
261-581
               

               
Cow position:
               
chr12:16359892-16359565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
262-560
               

               
Cow position:
               
chr12:22515705-22516021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
263-558
               

               
Cow position:
               
chr12:18769044-18769358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
263-561
               

               
Cow position:
               
chr12:29448675-29448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
263-569
               

               
Cow position:
               
chr12:15258691-15259003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
266-555
               

               
Cow position:
               
chr12:8104233-8104524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
266-560
               

               
Cow position:
               
chr12:23154455-23154751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
268-560
               

               
Cow position:
               
chr12:18420901-18421211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 294
               

               
Conread position:
               
269-583
               

               
Cow position:
               
chr12:48436893-48437212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
270-569
               

               
Cow position:
               
chr12:35310666-35310968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
276-556
               

               
Cow position:
               
chr12:6164009-6164310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
280-900
               

               
Cow position:
               
chr12:8842781-8843405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
282-560
               

               
Cow position:
               
chr12:45065828-45065549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
284-546
               

               
Cow position:
               
chr12:8710826-8710560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
287-560
               

               
Cow position:
               
chr12:33875565-33875832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
287-572
               

               
Cow position:
               
chr12:3579288-3578984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
287-577
               

               
Cow position:
               
chr12:10028889-10028589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
290-506
               

               
Cow position:
               
chr12:38454908-38454687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
293-560
               

               
Cow position:
               
chr12:1883532-1883792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
293-560
               

               
Cow position:
               
chr12:5899521-5899242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
294-560
               

               
Cow position:
               
chr12:19715041-19715312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
297-560
               

               
Cow position:
               
chr12:28572679-28572418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
298-555
               

               
Cow position:
               
chr12:29411497-29411768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 169
               

               
Conread position:
               
301-560
               

               
Cow position:
               
chr12:17495220-17495477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
303-560
               

               
Cow position:
               
chr12:2241903-2242170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
115, 161
               

               
Conread position:
               
312-547
               

               
Cow position:
               
chr12:33297799-33297574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
313-522
               

               
Cow position:
               
chr12:19372131-19372353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
316-541
               

               
Cow position:
               
chr12:17702253-17702499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
327-572
               

               
Cow position:
               
chr12:37123454-37123215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
357-560
               

               
Cow position:
               
chr12:24755101-24755309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
359-560
               

               
Cow position:
               
chr12:4594021-4593810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
359-573
               

               
Cow position:
               
chr12:40270161-40270385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
367-557
               

               
Cow position:
               
chr12:32391751-32391563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
374-560
               

               
Cow position:
               
chr12:10846721-10846903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
380-560
               

               
Cow position:
               
chr12:12178811-12178636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
384-538
               

               
Cow position:
               
chr12:31841327-31841174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
384-565
               

               
Cow position:
               
chr12:5135030-5134849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
384-577
               

               
Cow position:
               
chr12:32286011-32285818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
388-560
               

               
Cow position:
               
chr12:35771146-35771318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
389-561
               

               
Cow position:
               
chr12:22047357-22047184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
397-560
               

               
Cow position:
               
chr12:27808592-27808759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
401-560
               

               
Cow position:
               
chr12:9914659-9914504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
407-538
               

               
Cow position:
               
chr12:28804864-28804730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr12:12017744-12017591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr12:45814395-45814549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
407-571
               

               
Cow position:
               
chr12:40307562-40307399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
154, 59
               

               
Conread position:
               
407-579
               

               
Cow position:
               
chr12:17008069-17007893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 171
               

               
Conread position:
               
408-547
               

               
Cow position:
               
chr12:21393568-21393433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
408-552
               

               
Cow position:
               
chr12:34429281-34429420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr12:12976314-12976466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr12:30728368-30728519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-558
               

               
Cow position:
               
chr12:36954511-36954658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:941500-941347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:2286448-2286296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:7881853-7882006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:17486272-17486422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:26782751-26782596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:31925516-31925365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:34385650-34385799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:40158375-40158524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:41214459-41214603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:44013970-44014125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:44517872-44518020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr12:44766945-44766798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr12:3093128-3093285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr12:5800898-5800746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr12:8921920-8922080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr12:9465591-9465751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr12:29484028-29484183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr12:29762731-29762891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
408-569
               

               
Cow position:
               
chr12:3880389-3880552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr12:7109054-7108891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr12:31228437-31228282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr12:35218541-35218701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr12:20326637-20326473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 128
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr12:29995597-29995760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr12:24032868-24032703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
409-540
               

               
Cow position:
               
chr12:42282971-42283102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
409-554
               

               
Cow position:
               
chr12:27175803-27175950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr12:4134533-4134380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr12:19039748-19039896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr12:21922299-21922151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr12:25455981-25455829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr12:28011037-28011184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr12:28650817-28650672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
409-565
               

               
Cow position:
               
chr12:1284597-1284748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
409-569
               

               
Cow position:
               
chr12:46143686-46143526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
410-546
               

               
Cow position:
               
chr12:28559160-28559024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
410-558
               

               
Cow position:
               
chr12:46635083-46635228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
412-560
               

               
Cow position:
               
chr12:15622592-15622741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
413-560
               

               
Cow position:
               
chr12:30688199-30688053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
413-569
               

               
Cow position:
               
chr12:16851151-16851302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
413-581
               

               
Cow position:
               
chr12:3160925-3160755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
417-560
               

               
Cow position:
               
chr12:29119753-29119614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chr12:41979450-41979584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
421-572
               

               
Cow position:
               
chr12:2711342-2711194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
422-560
               

               
Cow position:
               
chr12:22132129-22132262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
422-560
               

               
Cow position:
               
chr12:23723578-23723440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
423-538
               

               
Cow position:
               
chr12:3994801-3994686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-555
               

               
Cow position:
               
chr12:27562987-27563117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
424-556
               

               
Cow position:
               
chr12:27038918-27039048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr12:3372543-3372407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr12:4866661-4866531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr12:19420089-19420217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr12:25529881-25529745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr12:31060132-31060268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-567
               

               
Cow position:
               
chr12:3197102-3196961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
424-567
               

               
Cow position:
               
chr12:20260713-20260856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-569
               

               
Cow position:
               
chr12:18937238-18937092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
424-571
               

               
Cow position:
               
chr12:1848687-1848835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
424-571
               

               
Cow position:
               
chr12:35136366-35136222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
425-571
               

               
Cow position:
               
chr12:34007149-34007002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr12:42254506-42254373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
427-569
               

               
Cow position:
               
chr12:3600052-3600191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
438-558
               

               
Cow position:
               
chr12:30946664-30946548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
451-572
               

               
Cow position:
               
chr12:38678522-38678401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 100
               

               
Conread position:
               
456-558
               

               
Cow position:
               
chr12:15089313-15089209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
554-815
               

               
Cow position:
               
chr12:25143821-25144080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
557-898
               

               
Cow position:
               
chr12:23138448-23138786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
561-890
               

               
Cow position:
               
chr12:10542172-10542490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
561-900
               

               
Cow position:
               
chr12:4663688-4664025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr12:27479650-27479311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
564-809
               

               
Cow position:
               
chr12:24980592-24980349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-891
               

               
Cow position:
               
chr12:62337-62667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-896
               

               
Cow position:
               
chr12:35548256-35548592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
564-897
               

               
Cow position:
               
chr12:1886481-1886817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:1437799-1437462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:6106476-6106814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:14568944-14569280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:22571714-22571381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:22748085-22747748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:25266462-25266799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:34176235-34175891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:34964428-34964764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:36213127-36212791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:37561879-37561542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:38893233-38892896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:42605305-42605642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr12:45144928-45144590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
577-808
               

               
Cow position:
               
chr12:35110619-35110393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
577-863
               

               
Cow position:
               
chr12:21090914-21091202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
578-900
               

               
Cow position:
               
chr12:29499340-29499665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
582-827
               

               
Cow position:
               
chr12:35263359-35263121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
582-892
               

               
Cow position:
               
chr12:30141276-30140964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr12:18585529-18585212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr12:25097411-25097727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
582-897
               

               
Cow position:
               
chr12:32284753-32284435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:3363796-3363479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:10358551-10358232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:17718154-17717835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:24993114-24993433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:27929939-27930258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:30686593-30686279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:32656407-32656089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:36405815-36406134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr12:42856676-42856992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-900
               

               
Cow position:
               
chr12:46976251-46975932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
638-876
               

               
Cow position:
               
chr12:22202874-22203112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:6078317-6078574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:16802248-16802508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:18467581-18467327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
202, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:21251785-21252045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:21430757-21430497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
203, 43
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:21484194-21483934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr12:22593552-22593292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
193, 45
               

               
Conread position:
               
638-899
               

               
Cow position:
               
chr12:8137175-8137435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
645-900
               

               
Cow position:
               
chr12:8343238-8343491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
199, 38
               

               
Conread position:
               
647-898
               

               
Cow position:
               
chr12:18202114-18201866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
651-898
               

               
Cow position:
               
chr12:24939316-24939069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
653-897
               

               
Cow position:
               
chr12:4829725-4829498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
655-889
               

               
Cow position:
               
chr12:12241844-12241618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 28
               

               
Conread position:
               
656-898
               

               
Cow position:
               
chr12:27354939-27355177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
172, 27
               

               
Conread position:
               
686-889
               

               
Cow position:
               
chr12:12295286-12295084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr12:21211414-21211209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr12:33925780-33925985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr12:537097-536910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr12:1404993-1404806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr12:16674743-16674559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 53
               
Show alignments to all cow chromosomes.