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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_002410.5.5
        

               
Conread position:
               
83-396
               

               
Cow position:
               
chr13:5671838-5671537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
86-417
               

               
Cow position:
               
chr13:41550038-41549713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
90-472
               

               
Cow position:
               
chr13:8354949-8355331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
91-567
               

               
Cow position:
               
chr13:56155399-56154922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 83
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr13:17799824-17800297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
96-560
               

               
Cow position:
               
chr13:23961030-23960574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
295, 13
               

               
Conread position:
               
96-572
               

               
Cow position:
               
chr13:20684374-20683878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 121
               

               
Conread position:
               
97-335
               

               
Cow position:
               
chr13:53850582-53850817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
97-569
               

               
Cow position:
               
chr13:43479823-43480303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr13:37621597-37621361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
99-560
               

               
Cow position:
               
chr13:52057323-52057773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 25
               

               
Conread position:
               
100-549
               

               
Cow position:
               
chr13:13466014-13465569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
102-614
               

               
Cow position:
               
chr13:44322674-44323195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
103-350
               

               
Cow position:
               
chr13:52881101-52880860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
103-560
               

               
Cow position:
               
chr13:6087132-6086669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
103-591
               

               
Cow position:
               
chr13:6189832-6189365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
309, 21
               

               
Conread position:
               
104-560
               

               
Cow position:
               
chr13:54701951-54702422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
106-560
               

               
Cow position:
               
chr13:20706445-20705971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 458
               

               
Conread position:
               
106-562
               

               
Cow position:
               
chr13:2773901-2774358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
112-577
               

               
Cow position:
               
chr13:45023431-45022958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
114-410
               

               
Cow position:
               
chr13:17563513-17563803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
123-341
               

               
Cow position:
               
chr13:8350108-8350322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
123-560
               

               
Cow position:
               
chr13:38873151-38872740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
283, 7
               

               
Conread position:
               
124-566
               

               
Cow position:
               
chr13:40943024-40943481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
128-405
               

               
Cow position:
               
chr13:52586253-52585973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 268
               

               
Conread position:
               
131-295
               

               
Cow position:
               
chr13:18701164-18701325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
131-541
               

               
Cow position:
               
chr13:19022076-19022491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 43
               

               
Conread position:
               
131-549
               

               
Cow position:
               
chr13:20679125-20679566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
131-558
               

               
Cow position:
               
chr13:8609758-8609318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
131-560
               

               
Cow position:
               
chr13:33352553-33352135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 74
               

               
Conread position:
               
131-566
               

               
Cow position:
               
chr13:23167309-23166858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
133-473
               

               
Cow position:
               
chr13:18696637-18696991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
230, 87
               

               
Conread position:
               
133-560
               

               
Cow position:
               
chr13:17971229-17970803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
238, 33
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr13:21136094-21135833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
146, 36
               

               
Conread position:
               
142-547
               

               
Cow position:
               
chr13:18172135-18172559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 345
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr13:40634701-40634902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
175-511
               

               
Cow position:
               
chr13:5082483-5082837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
175-561
               

               
Cow position:
               
chr13:36771587-36771191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
178-560
               

               
Cow position:
               
chr13:23856052-23856447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
179-560
               

               
Cow position:
               
chr13:32950156-32949771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr13:33854838-33854698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
184-410
               

               
Cow position:
               
chr13:9981992-9981774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
186-396
               

               
Cow position:
               
chr13:18197759-18197554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
186-557
               

               
Cow position:
               
chr13:38284130-38283755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
187-560
               

               
Cow position:
               
chr13:35526345-35525982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
176, 38
               

               
Conread position:
               
188-560
               

               
Cow position:
               
chr13:12547057-12546675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
208, 27
               

               
Conread position:
               
188-567
               

               
Cow position:
               
chr13:21288236-21287851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
189-388
               

               
Cow position:
               
chr13:20534743-20534939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
189-393
               

               
Cow position:
               
chr13:21171720-21171522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
189-560
               

               
Cow position:
               
chr13:51528590-51528214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
209, 33
               

               
Conread position:
               
189-560
               

               
Cow position:
               
chr13:52637153-52637514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
190-560
               

               
Cow position:
               
chr13:18166581-18166962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
191-541
               

               
Cow position:
               
chr13:15257513-15257165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 29
               

               
Conread position:
               
191-560
               

               
Cow position:
               
chr13:23478884-23479261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 29
               

               
Conread position:
               
191-560
               

               
Cow position:
               
chr13:27525406-27525030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
191-569
               

               
Cow position:
               
chr13:33256353-33256738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
192-467
               

               
Cow position:
               
chr13:11381871-11381579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
192-560
               

               
Cow position:
               
chr13:23667106-23667494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
161, 33
               

               
Conread position:
               
193-396
               

               
Cow position:
               
chr13:19007792-19007985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr13:19278948-19279163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr13:20288194-20288397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
193-555
               

               
Cow position:
               
chr13:14927118-14927466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
193-560
               

               
Cow position:
               
chr13:17021869-17021488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 30
               

               
Conread position:
               
193-560
               

               
Cow position:
               
chr13:41806628-41807007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
195-403
               

               
Cow position:
               
chr13:21170384-21170589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
195-473
               

               
Cow position:
               
chr13:26698643-26698348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
195-558
               

               
Cow position:
               
chr13:14063665-14063298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
195-559
               

               
Cow position:
               
chr13:25817385-25817744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
195-560
               

               
Cow position:
               
chr13:32017654-32017291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
149, 25
               

               
Conread position:
               
195-566
               

               
Cow position:
               
chr13:34281534-34281918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 20
               

               
Conread position:
               
197-393
               

               
Cow position:
               
chr13:17611695-17611500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
197-489
               

               
Cow position:
               
chr13:54582734-54583042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
198-560
               

               
Cow position:
               
chr13:55674347-55673973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 25
               

               
Conread position:
               
199-415
               

               
Cow position:
               
chr13:46329748-46329532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
199-423
               

               
Cow position:
               
chr13:19320392-19320613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
199-560
               

               
Cow position:
               
chr13:20666530-20666156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
199-572
               

               
Cow position:
               
chr13:46525567-46525198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 21
               

               
Conread position:
               
201-396
               

               
Cow position:
               
chr13:20314759-20314566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
201-410
               

               
Cow position:
               
chr13:20868892-20868689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
201-511
               

               
Cow position:
               
chr13:49503670-49503345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
162, 24
               

               
Conread position:
               
201-541
               

               
Cow position:
               
chr13:37803755-37804092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
201-556
               

               
Cow position:
               
chr13:12989711-12990075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
189, 19
               

               
Conread position:
               
201-560
               

               
Cow position:
               
chr13:38329474-38329862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
202-577
               

               
Cow position:
               
chr13:11820462-11820829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
203-410
               

               
Cow position:
               
chr13:13196105-13196308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
203-554
               

               
Cow position:
               
chr13:18851947-18852302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
203-555
               

               
Cow position:
               
chr13:55316331-55315962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
203-560
               

               
Cow position:
               
chr13:11460496-11460855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
203-583
               

               
Cow position:
               
chr13:42200485-42200874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
205-560
               

               
Cow position:
               
chr13:311302-311662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
205-572
               

               
Cow position:
               
chr13:31813741-31814112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr13:15756985-15757187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
206-548
               

               
Cow position:
               
chr13:12202227-12202585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
206-560
               

               
Cow position:
               
chr13:13260867-13261240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 83
               

               
Conread position:
               
206-560
               

               
Cow position:
               
chr13:56686303-56686659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
206-591
               

               
Cow position:
               
chr13:60966634-60967030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 17
               

               
Conread position:
               
207-577
               

               
Cow position:
               
chr13:21176449-21176074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
219, 9
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr13:18181907-18181720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
156, 19
               

               
Conread position:
               
209-572
               

               
Cow position:
               
chr13:57494321-57493939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
210-452
               

               
Cow position:
               
chr13:15144495-15144244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 6
               

               
Conread position:
               
210-558
               

               
Cow position:
               
chr13:8839123-8838764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
210-580
               

               
Cow position:
               
chr13:13176519-13176904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
200, 18
               

               
Conread position:
               
213-577
               

               
Cow position:
               
chr13:21107016-21107374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
148, 52
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr13:7265249-7265052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
215-537
               

               
Cow position:
               
chr13:151835-152160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
215-560
               

               
Cow position:
               
chr13:47964309-47963969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
216-470
               

               
Cow position:
               
chr13:8374898-8374626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
216-572
               

               
Cow position:
               
chr13:17622163-17622529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr13:17089646-17089469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
217-506
               

               
Cow position:
               
chr13:49022993-49022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
218-463
               

               
Cow position:
               
chr13:51116148-51115889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 136
               

               
Conread position:
               
219-493
               

               
Cow position:
               
chr13:15902901-15903182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
169, 134
               

               
Conread position:
               
220-410
               

               
Cow position:
               
chr13:18058373-18058179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
220-559
               

               
Cow position:
               
chr13:11808455-11808773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
224, 68
               

               
Conread position:
               
220-569
               

               
Cow position:
               
chr13:15166696-15167060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
149, 69
               

               
Conread position:
               
221-386
               

               
Cow position:
               
chr13:28440656-28440492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
221-386
               

               
Cow position:
               
chr13:55494647-55494477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
221-401
               

               
Cow position:
               
chr13:20217519-20217337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr13:8401935-8402123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr13:47022244-47022436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 134
               

               
Conread position:
               
221-414
               

               
Cow position:
               
chr13:35557232-35557034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
221-460
               

               
Cow position:
               
chr13:62518451-62518196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 221
               

               
Conread position:
               
221-495
               

               
Cow position:
               
chr13:20473803-20473520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 134
               

               
Conread position:
               
221-529
               

               
Cow position:
               
chr13:547374-547689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
177, 32
               

               
Conread position:
               
221-545
               

               
Cow position:
               
chr13:57770107-57769802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
221-555
               

               
Cow position:
               
chr13:17439889-17439539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
221-559
               

               
Cow position:
               
chr13:17114498-17114149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:972018-971666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:15289042-15288694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:19393171-19393519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
149, 62
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:19610685-19610347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:20784469-20784820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 257
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:35659639-35659985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr13:43194048-43194407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 257
               

               
Conread position:
               
221-567
               

               
Cow position:
               
chr13:21235792-21235446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 118
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr13:10929109-10928748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr13:19883157-19882794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
221-570
               

               
Cow position:
               
chr13:17745127-17745485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr13:13501738-13501377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr13:18835083-18835431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
189, 75
               

               
Conread position:
               
221-573
               

               
Cow position:
               
chr13:21242205-21241846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 151
               

               
Conread position:
               
222-552
               

               
Cow position:
               
chr13:20839446-20839792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
176, 126
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr13:13765670-13765998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
199, 51
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr13:17977234-17977560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr13:44201889-44202221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr13:51940614-51940961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
137, 117
               

               
Conread position:
               
222-566
               

               
Cow position:
               
chr13:28683242-28683597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 240
               

               
Conread position:
               
222-569
               

               
Cow position:
               
chr13:25435243-25434887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
222-572
               

               
Cow position:
               
chr13:6079532-6079174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
223-506
               

               
Cow position:
               
chr13:5758461-5758167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
224-572
               

               
Cow position:
               
chr13:61977081-61976720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
225-560
               

               
Cow position:
               
chr13:53566484-53566828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
225-568
               

               
Cow position:
               
chr13:48037506-48037861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
226-560
               

               
Cow position:
               
chr13:7076141-7076488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 92
               

               
Conread position:
               
226-566
               

               
Cow position:
               
chr13:3315791-3315435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 127
               

               
Conread position:
               
227-540
               

               
Cow position:
               
chr13:15529152-15528819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 326
               

               
Conread position:
               
227-560
               

               
Cow position:
               
chr13:52283798-52284141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
228-369
               

               
Cow position:
               
chr13:56535341-56535482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
228-376
               

               
Cow position:
               
chr13:31529763-31529912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr13:15194849-15194665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr13:29123190-29123372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr13:54389135-54388952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
228-473
               

               
Cow position:
               
chr13:17569215-17568950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
228-506
               

               
Cow position:
               
chr13:52055706-52055418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 127
               

               
Conread position:
               
228-541
               

               
Cow position:
               
chr13:8245445-8245119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
228-549
               

               
Cow position:
               
chr13:13320683-13320997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 131
               

               
Conread position:
               
228-558
               

               
Cow position:
               
chr13:37981858-37981525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
228-559
               

               
Cow position:
               
chr13:6061122-6060777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
162, 272
               

               
Conread position:
               
228-559
               

               
Cow position:
               
chr13:13088915-13089254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:6153898-6153547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
161, 255
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:11260161-11260484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:12670565-12670213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 298
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:15460890-15460565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
119, 162
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:15885136-15884782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
143, 338
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:17821384-17821028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
136, 340
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:24369468-24369817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:24753773-24754116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
163, 125
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:34263484-34263141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 148
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr13:37484393-37484038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr13:24585933-24586285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
228-567
               

               
Cow position:
               
chr13:21275745-21276094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
163, 127
               

               
Conread position:
               
228-577
               

               
Cow position:
               
chr13:52284702-52285065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
229-410
               

               
Cow position:
               
chr13:48862208-48862029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
52, 57
               

               
Conread position:
               
229-579
               

               
Cow position:
               
chr13:43762055-43762419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
135, 256
               

               
Conread position:
               
230-511
               

               
Cow position:
               
chr13:34555940-34555668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 86
               

               
Conread position:
               
230-560
               

               
Cow position:
               
chr13:17292243-17291899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
141, 56
               

               
Conread position:
               
230-560
               

               
Cow position:
               
chr13:47007830-47007506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
168, 11
               

               
Conread position:
               
238-560
               

               
Cow position:
               
chr13:15233821-15234142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
241-534
               

               
Cow position:
               
chr13:9643988-9643676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
113, 119
               

               
Conread position:
               
241-558
               

               
Cow position:
               
chr13:8524719-8524391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 255
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr13:8201584-8201253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 115
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr13:34995430-34995094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr13:43184982-43184640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
241-566
               

               
Cow position:
               
chr13:36353058-36352733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 94
               

               
Conread position:
               
246-570
               

               
Cow position:
               
chr13:1043065-1042714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
119, 107
               

               
Conread position:
               
247-560
               

               
Cow position:
               
chr13:24280162-24280480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
249-550
               

               
Cow position:
               
chr13:9593412-9593727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
117, 233
               

               
Conread position:
               
252-572
               

               
Cow position:
               
chr13:21708112-21708426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
255-569
               

               
Cow position:
               
chr13:54382007-54381693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
256-554
               

               
Cow position:
               
chr13:39459729-39460013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
286, 103
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr13:25062328-25062642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
257-566
               

               
Cow position:
               
chr13:890254-889940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
257-571
               

               
Cow position:
               
chr13:4463927-4464249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
257-571
               

               
Cow position:
               
chr13:20820914-20820597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 216
               

               
Conread position:
               
257-572
               

               
Cow position:
               
chr13:23270290-23269968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
257-572
               

               
Cow position:
               
chr13:61166535-61166212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
258-506
               

               
Cow position:
               
chr13:20231274-20231022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
258-553
               

               
Cow position:
               
chr13:33054457-33054170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
171, 95
               

               
Conread position:
               
258-555
               

               
Cow position:
               
chr13:25531874-25531561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr13:8362827-8362514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr13:12408373-12408052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
81, 305
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr13:15624543-15624844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr13:19138356-19138669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr13:25926706-25927024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 228
               

               
Conread position:
               
258-562
               

               
Cow position:
               
chr13:49514783-49514485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr13:10932467-10932791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr13:18989638-18989944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr13:26383319-26382992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
258-577
               

               
Cow position:
               
chr13:33631045-33631370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
258-590
               

               
Cow position:
               
chr13:37069261-37069612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
106, 238
               

               
Conread position:
               
258-590
               

               
Cow position:
               
chr13:37985828-37985491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr13:21283787-21283515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr13:60340725-60341026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
261-541
               

               
Cow position:
               
chr13:52228181-52227887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 99
               

               
Conread position:
               
261-544
               

               
Cow position:
               
chr13:51015259-51014964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
261-549
               

               
Cow position:
               
chr13:5263362-5263065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
261-553
               

               
Cow position:
               
chr13:37775288-37775000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
261-558
               

               
Cow position:
               
chr13:34035286-34035598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr13:2883980-2884284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 93
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr13:12045419-12045104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 295
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr13:12977494-12977793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:1155784-1155476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:6616840-6616516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:8195017-8195314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:8202947-8202653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
121, 142
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:13306015-13306338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:19023929-19023607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:20814351-20814048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 149
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:20816242-20816545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 149
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:20879905-20879603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:34507805-34508108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
114, 134
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:40651853-40652165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
135, 114
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:48528394-48528105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr13:60509201-60508884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
105, 224
               

               
Conread position:
               
261-565
               

               
Cow position:
               
chr13:31808440-31808749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr13:61047133-61047448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 230
               

               
Conread position:
               
261-571
               

               
Cow position:
               
chr13:20650068-20649741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 231
               

               
Conread position:
               
261-571
               

               
Cow position:
               
chr13:45604497-45604174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr13:17613259-17613591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 236
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr13:20606198-20605874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
261-577
               

               
Cow position:
               
chr13:43595189-43594866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr13:7010392-7010701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr13:26261867-26261562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr13:43139293-43138997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
263-569
               

               
Cow position:
               
chr13:17855293-17855616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
263-571
               

               
Cow position:
               
chr13:42113940-42114265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
132, 102
               

               
Conread position:
               
263-577
               

               
Cow position:
               
chr13:6621670-6621348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
269-513
               

               
Cow position:
               
chr13:12619188-12618924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
270-560
               

               
Cow position:
               
chr13:24376421-24376722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 194
               

               
Conread position:
               
276-558
               

               
Cow position:
               
chr13:9587655-9587354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 287
               

               
Conread position:
               
276-560
               

               
Cow position:
               
chr13:55295692-55295394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
278-573
               

               
Cow position:
               
chr13:16024525-16024834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 225
               

               
Conread position:
               
280-560
               

               
Cow position:
               
chr13:30693652-30693933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
281-560
               

               
Cow position:
               
chr13:60436935-60436651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
285-553
               

               
Cow position:
               
chr13:37521433-37521155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
285-560
               

               
Cow position:
               
chr13:30509999-30510293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
285-571
               

               
Cow position:
               
chr13:1845845-1846129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
288-560
               

               
Cow position:
               
chr13:6651301-6651030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
290-560
               

               
Cow position:
               
chr13:20440633-20440371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
291-560
               

               
Cow position:
               
chr13:4037842-4038112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
291-566
               

               
Cow position:
               
chr13:20880981-20880688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
293-515
               

               
Cow position:
               
chr13:62474848-62474612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
294-560
               

               
Cow position:
               
chr13:19178224-19178508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
294-561
               

               
Cow position:
               
chr13:17815730-17816004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
295-578
               

               
Cow position:
               
chr13:10860002-10859714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
295-591
               

               
Cow position:
               
chr13:43384670-43384370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
298-558
               

               
Cow position:
               
chr13:38898291-38898023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
301-560
               

               
Cow position:
               
chr13:26098119-26098374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
302-566
               

               
Cow position:
               
chr13:52922055-52922326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
304-560
               

               
Cow position:
               
chr13:12682584-12682309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
309-577
               

               
Cow position:
               
chr13:25261845-25261557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
311-572
               

               
Cow position:
               
chr13:3701408-3701677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
313-558
               

               
Cow position:
               
chr13:13265777-13266031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 176
               

               
Conread position:
               
313-560
               

               
Cow position:
               
chr13:18215415-18215661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
313-572
               

               
Cow position:
               
chr13:34052618-34052357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
313-582
               

               
Cow position:
               
chr13:17886476-17886756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
315-572
               

               
Cow position:
               
chr13:20864043-20863776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
316-571
               

               
Cow position:
               
chr13:52199060-52199331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
320-569
               

               
Cow position:
               
chr13:24060358-24060109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
324-560
               

               
Cow position:
               
chr13:16155730-16155486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
327-548
               

               
Cow position:
               
chr13:43812071-43812304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
327-548
               

               
Cow position:
               
chr13:43839558-43839325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
330-591
               

               
Cow position:
               
chr13:35853345-35853086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
331-569
               

               
Cow position:
               
chr13:29122833-29122601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
337-572
               

               
Cow position:
               
chr13:1011340-1011577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
339-574
               

               
Cow position:
               
chr13:24689956-24690188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
340-560
               

               
Cow position:
               
chr13:60221412-60221202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 17
               

               
Conread position:
               
345-549
               

               
Cow position:
               
chr13:37795448-37795655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 155
               

               
Conread position:
               
349-560
               

               
Cow position:
               
chr13:16127842-16128049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
351-572
               

               
Cow position:
               
chr13:11570700-11570932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 201
               

               
Conread position:
               
355-562
               

               
Cow position:
               
chr13:17763041-17762839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
356-566
               

               
Cow position:
               
chr13:21402768-21402557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
359-569
               

               
Cow position:
               
chr13:8607502-8607277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
360-560
               

               
Cow position:
               
chr13:48378528-48378340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr13:47852068-47852291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
161, 52
               

               
Conread position:
               
361-560
               

               
Cow position:
               
chr13:13343989-13344186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
361-560
               

               
Cow position:
               
chr13:24373428-24373636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
361-571
               

               
Cow position:
               
chr13:3479772-3479991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
362-577
               

               
Cow position:
               
chr13:48251968-48251742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
371-557
               

               
Cow position:
               
chr13:29820198-29820009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
371-566
               

               
Cow position:
               
chr13:29671386-29671203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
371-567
               

               
Cow position:
               
chr13:52379711-52379518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
381-560
               

               
Cow position:
               
chr13:58043682-58043860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
382-544
               

               
Cow position:
               
chr13:61188590-61188751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
382-557
               

               
Cow position:
               
chr13:46458682-46458851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
382-560
               

               
Cow position:
               
chr13:15740123-15740298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
382-560
               

               
Cow position:
               
chr13:20834797-20834625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
382-560
               

               
Cow position:
               
chr13:60430015-60429847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
382-567
               

               
Cow position:
               
chr13:14544177-14544361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
382-571
               

               
Cow position:
               
chr13:12614315-12614504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
383-559
               

               
Cow position:
               
chr13:52585961-52585790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
384-558
               

               
Cow position:
               
chr13:50823497-50823326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr13:20537653-20537815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
397-560
               

               
Cow position:
               
chr13:34728763-34728607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
404-591
               

               
Cow position:
               
chr13:26757859-26758053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
407-551
               

               
Cow position:
               
chr13:21039517-21039375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
407-558
               

               
Cow position:
               
chr13:43629687-43629546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr13:30793899-30794053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr13:54331098-54331251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-566
               

               
Cow position:
               
chr13:26480129-26479976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
408-532
               

               
Cow position:
               
chr13:19223729-19223853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-548
               

               
Cow position:
               
chr13:11147386-11147526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
408-549
               

               
Cow position:
               
chr13:563059-562917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
408-549
               

               
Cow position:
               
chr13:22025625-22025480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
408-549
               

               
Cow position:
               
chr13:60690643-60690501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
408-551
               

               
Cow position:
               
chr13:6975709-6975567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr13:34261318-34261459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr13:57323538-57323681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
408-558
               

               
Cow position:
               
chr13:36949090-36948940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr13:9884848-9884999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr13:19033638-19033778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr13:21209942-21210093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr13:49805054-49805205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:3003525-3003679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:5091582-5091429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:6606939-6606788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:7257479-7257633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:15872530-15872681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:15974696-15974842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:17994009-17994158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:21155409-21155257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:24776364-24776523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:27985345-27985197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:30651261-30651407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:32283208-32283359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:33517839-33517692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:37517053-37516904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:38484915-38485062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:45353127-45353274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:50681726-50681577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:52010500-52010354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr13:61170637-61170484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
408-561
               

               
Cow position:
               
chr13:54093828-54093973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
408-565
               

               
Cow position:
               
chr13:12282918-12283072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr13:33875750-33875900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr13:60599857-60599704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr13:12448909-12448751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
408-569
               

               
Cow position:
               
chr13:15869206-15869360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr13:56148620-56148783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr13:56160347-56160184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr13:2113765-2113930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr13:21524509-21524670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr13:52440269-52440432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 135
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr13:15172327-15172157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr13:19555838-19556002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
408-579
               

               
Cow position:
               
chr13:54344855-54345028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
409-529
               

               
Cow position:
               
chr13:60393615-60393498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
409-558
               

               
Cow position:
               
chr13:9974991-9974838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
409-559
               

               
Cow position:
               
chr13:11767957-11767810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr13:49283260-49283111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr13:50690312-50690160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
409-565
               

               
Cow position:
               
chr13:15041389-15041235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
409-567
               

               
Cow position:
               
chr13:38278050-38277898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
409-572
               

               
Cow position:
               
chr13:9302294-9302129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
409-572
               

               
Cow position:
               
chr13:12244933-12244771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
409-577
               

               
Cow position:
               
chr13:11955024-11954867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
410-511
               

               
Cow position:
               
chr13:21189363-21189464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr13:20527076-20527226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr13:27027689-27027537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
410-571
               

               
Cow position:
               
chr13:47756455-47756619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
411-515
               

               
Cow position:
               
chr13:966160-966265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
411-560
               

               
Cow position:
               
chr13:8779481-8779626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
411-571
               

               
Cow position:
               
chr13:21670449-21670606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
412-577
               

               
Cow position:
               
chr13:6945456-6945623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
413-555
               

               
Cow position:
               
chr13:35719052-35718907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
413-560
               

               
Cow position:
               
chr13:24539581-24539727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
413-571
               

               
Cow position:
               
chr13:46298557-46298394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
413-577
               

               
Cow position:
               
chr13:11290731-11290570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
415-560
               

               
Cow position:
               
chr13:46329376-46329232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
417-560
               

               
Cow position:
               
chr13:9125763-9125905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
421-572
               

               
Cow position:
               
chr13:6759696-6759545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 100
               

               
Conread position:
               
422-559
               

               
Cow position:
               
chr13:265238-265376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
423-572
               

               
Cow position:
               
chr13:42860475-42860325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
424-547
               

               
Cow position:
               
chr13:17004495-17004373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
424-549
               

               
Cow position:
               
chr13:60084-59962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
424-551
               

               
Cow position:
               
chr13:7059571-7059698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-553
               

               
Cow position:
               
chr13:20531041-20530918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
424-555
               

               
Cow position:
               
chr13:1779933-1780060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
424-558
               

               
Cow position:
               
chr13:23444713-23444580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr13:12925887-12926022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr13:16292645-16292778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr13:18551547-18551680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr13:21989006-21988870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr13:34556234-34556100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
424-561
               

               
Cow position:
               
chr13:17270056-17270190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
424-571
               

               
Cow position:
               
chr13:25453266-25453414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
424-571
               

               
Cow position:
               
chr13:38012457-38012605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
424-572
               

               
Cow position:
               
chr13:52879508-52879657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 119
               

               
Conread position:
               
424-572
               

               
Cow position:
               
chr13:54418332-54418477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
138, 58
               

               
Conread position:
               
425-561
               

               
Cow position:
               
chr13:19320852-19320982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
426-549
               

               
Cow position:
               
chr13:20041860-20041740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
426-549
               

               
Cow position:
               
chr13:40491331-40491454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr13:2463125-2462999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr13:20683051-20683178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
427-569
               

               
Cow position:
               
chr13:14576773-14576908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
427-577
               

               
Cow position:
               
chr13:53012283-53012137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
427-590
               

               
Cow position:
               
chr13:26698004-26697841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 116
               

               
Conread position:
               
428-552
               

               
Cow position:
               
chr13:53308598-53308722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
438-560
               

               
Cow position:
               
chr13:19279425-19279545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
438-560
               

               
Cow position:
               
chr13:36264078-36264196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
444-566
               

               
Cow position:
               
chr13:47599484-47599606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
445-558
               

               
Cow position:
               
chr13:16270053-16270165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
448-560
               

               
Cow position:
               
chr13:32826287-32826175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
450-560
               

               
Cow position:
               
chr13:57227830-57227940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
467-566
               

               
Cow position:
               
chr13:51901751-51901850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-879
               

               
Cow position:
               
chr13:17329518-17329837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr13:11827054-11827401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr13:34322297-34322632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr13:51006357-51006698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
561-892
               

               
Cow position:
               
chr13:33632486-33632803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr13:19731505-19731831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr13:36936393-36936058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr13:38075643-38075971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
561-900
               

               
Cow position:
               
chr13:57026533-57026190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
562-889
               

               
Cow position:
               
chr13:36105786-36105473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
563-897
               

               
Cow position:
               
chr13:17538223-17537889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr13:3314291-3313952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr13:58718219-58717882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
563-899
               

               
Cow position:
               
chr13:36347459-36347795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
563-900
               

               
Cow position:
               
chr13:21855004-21854670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
564-810
               

               
Cow position:
               
chr13:3014837-3014597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
564-897
               

               
Cow position:
               
chr13:393472-393801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:561722-562061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:644310-644647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:3556075-3555737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:5499324-5499661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:6360529-6360192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:13333292-13333631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:15559998-15559661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:16807259-16806922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:18122208-18122545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:19230049-19230387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:22275463-22275137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:23456100-23455765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:30305851-30305518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:32724629-32724290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:36672319-36671982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:49976332-49975995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:60646923-60647259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr13:61953913-61953564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
564-900
               

               
Cow position:
               
chr13:11301866-11301548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
571-898
               

               
Cow position:
               
chr13:32080520-32080190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
577-882
               

               
Cow position:
               
chr13:34509168-34509471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr13:5230306-5230623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr13:11289901-11289594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr13:17311067-17310743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
582-825
               

               
Cow position:
               
chr13:50190426-50190668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
582-887
               

               
Cow position:
               
chr13:39921895-39922193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr13:19114775-19115083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr13:32549404-32549087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr13:32734542-32734859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr13:33333709-33334020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:5515682-5516001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:8068558-8068876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:9300815-9300497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:13902504-13902187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:18330481-18330800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:19637797-19637471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 213
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:30035653-30035960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:31608796-31609112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:32253707-32254026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:34332388-34332070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:34763350-34763650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr13:35760201-35759883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
583-896
               

               
Cow position:
               
chr13:32922631-32922945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
585-784
               

               
Cow position:
               
chr13:488180-487981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
587-825
               

               
Cow position:
               
chr13:32955817-32956053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
587-897
               

               
Cow position:
               
chr13:47569733-47569430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
187, 41
               

               
Conread position:
               
587-898
               

               
Cow position:
               
chr13:32776432-32776748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
587-898
               

               
Cow position:
               
chr13:32982758-32983072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
603-865
               

               
Cow position:
               
chr13:17480129-17480391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
611-898
               

               
Cow position:
               
chr13:6665520-6665808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
630-840
               

               
Cow position:
               
chr13:33169159-33169360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
630-896
               

               
Cow position:
               
chr13:30652694-30652958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
638-825
               

               
Cow position:
               
chr13:26080404-26080222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-878
               

               
Cow position:
               
chr13:34298174-34297934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
638-884
               

               
Cow position:
               
chr13:6441426-6441180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
638-893
               

               
Cow position:
               
chr13:47368754-47368504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
638-896
               

               
Cow position:
               
chr13:47536691-47536437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
638-897
               

               
Cow position:
               
chr13:18976099-18976353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
199, 51
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr13:5623173-5623430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr13:13327524-13327265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr13:20572116-20572375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr13:21401431-21401171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr13:35539752-35539492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr13:51769888-51769634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
643-863
               

               
Cow position:
               
chr13:60425607-60425390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
643-879
               

               
Cow position:
               
chr13:48548726-48548490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
643-889
               

               
Cow position:
               
chr13:44734627-44734397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr13:19394450-19394701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:114619-114364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:19566299-19566044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:24932211-24932467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:27539745-27539490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:33523376-33523630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:54312633-54312387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr13:60698221-60698474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
643-899
               

               
Cow position:
               
chr13:25881817-25881569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
199, 22
               

               
Conread position:
               
643-900
               

               
Cow position:
               
chr13:31730989-31731244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-900
               

               
Cow position:
               
chr13:44650217-44650460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
647-899
               

               
Cow position:
               
chr13:3481298-3481538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
176, 36
               

               
Conread position:
               
652-898
               

               
Cow position:
               
chr13:11738328-11738082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
652-898
               

               
Cow position:
               
chr13:43891805-43891559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
652-898
               

               
Cow position:
               
chr13:47024368-47024122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
652-898
               

               
Cow position:
               
chr13:51465627-51465873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
653-889
               

               
Cow position:
               
chr13:31380115-31379887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
653-890
               

               
Cow position:
               
chr13:2507736-2507501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
653-898
               

               
Cow position:
               
chr13:1047483-1047721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
657-898
               

               
Cow position:
               
chr13:49061925-49061684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
664-900
               

               
Cow position:
               
chr13:37833341-37833569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
676-900
               

               
Cow position:
               
chr13:22080616-22080835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 7
               

               
Conread position:
               
695-896
               

               
Cow position:
               
chr13:43033249-43033050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
695-897
               

               
Cow position:
               
chr13:12659157-12658951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 92
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr13:33074606-33074401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr13:47729565-47729360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
714-879
               

               
Cow position:
               
chr13:2581583-2581747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
718-898
               

               
Cow position:
               
chr13:33929894-33930079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
726-897
               

               
Cow position:
               
chr13:51183280-51183109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 48
               
Show alignments to all cow chromosomes.