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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_002410.5.5
        

               
Conread position:
               
60-569
               

               
Cow position:
               
chr18:39875027-39875547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
83-587
               

               
Cow position:
               
chr18:31724689-31725190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
84-571
               

               
Cow position:
               
chr18:4884330-4884806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
94-558
               

               
Cow position:
               
chr18:36230528-36230988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
95-898
               

               
Cow position:
               
chr18:1955728-1956533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
97-333
               

               
Cow position:
               
chr18:11672230-11672004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
98-560
               

               
Cow position:
               
chr18:25647044-25647528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 184
               

               
Conread position:
               
98-560
               

               
Cow position:
               
chr18:55505596-55505122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
99-519
               

               
Cow position:
               
chr18:41024944-41025366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
103-495
               

               
Cow position:
               
chr18:1954410-1954808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
103-569
               

               
Cow position:
               
chr18:45104257-45104735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
104-385
               

               
Cow position:
               
chr18:9177095-9176811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
105-396
               

               
Cow position:
               
chr18:53039021-53038726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
106-560
               

               
Cow position:
               
chr18:11691225-11691689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 16
               

               
Conread position:
               
109-393
               

               
Cow position:
               
chr18:34219742-34220019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
109-410
               

               
Cow position:
               
chr18:8300187-8299901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
246, 25
               

               
Conread position:
               
109-524
               

               
Cow position:
               
chr18:33008248-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
131-560
               

               
Cow position:
               
chr18:42747739-42747317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
265, 43
               

               
Conread position:
               
137-560
               

               
Cow position:
               
chr18:4534871-4535263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 83
               

               
Conread position:
               
144-560
               

               
Cow position:
               
chr18:56184076-56183659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 17
               

               
Conread position:
               
168-577
               

               
Cow position:
               
chr18:9008245-9007852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
207, 7
               

               
Conread position:
               
172-548
               

               
Cow position:
               
chr18:21768738-21768360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
36, 141
               

               
Conread position:
               
172-560
               

               
Cow position:
               
chr18:29058384-29058774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
174-341
               

               
Cow position:
               
chr18:2765366-2765206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
175-493
               

               
Cow position:
               
chr18:45637301-45637608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
177-396
               

               
Cow position:
               
chr18:7077066-7076856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
181-579
               

               
Cow position:
               
chr18:28923741-28924131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 32
               

               
Conread position:
               
181-584
               

               
Cow position:
               
chr18:46727698-46727287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 44
               

               
Conread position:
               
183-396
               

               
Cow position:
               
chr18:49324332-49324524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
183-552
               

               
Cow position:
               
chr18:4489802-4490145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
183-560
               

               
Cow position:
               
chr18:2849161-2849540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
183-560
               

               
Cow position:
               
chr18:4797076-4796690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
184-571
               

               
Cow position:
               
chr18:31082242-31082611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 31
               

               
Conread position:
               
185-513
               

               
Cow position:
               
chr18:33896312-33896655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
185-560
               

               
Cow position:
               
chr18:9010812-9010453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
154, 35
               

               
Conread position:
               
187-396
               

               
Cow position:
               
chr18:46135844-46135642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
187-560
               

               
Cow position:
               
chr18:49655788-49655436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
188-559
               

               
Cow position:
               
chr18:28657810-28658192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 32
               

               
Conread position:
               
189-541
               

               
Cow position:
               
chr18:43283657-43284018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
202, 26
               

               
Conread position:
               
189-560
               

               
Cow position:
               
chr18:55000638-55001018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
190-569
               

               
Cow position:
               
chr18:12242378-12242001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
163, 102
               

               
Conread position:
               
191-407
               

               
Cow position:
               
chr18:11312838-11313050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
191-534
               

               
Cow position:
               
chr18:42431510-42431861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
204, 29
               

               
Conread position:
               
191-544
               

               
Cow position:
               
chr18:11791019-11790676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
191-591
               

               
Cow position:
               
chr18:6881257-6881651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
192-577
               

               
Cow position:
               
chr18:12113268-12113664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
153, 28
               

               
Conread position:
               
193-409
               

               
Cow position:
               
chr18:1399255-1399465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
193-427
               

               
Cow position:
               
chr18:34834593-34834359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
193-556
               

               
Cow position:
               
chr18:11184036-11183667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
193-559
               

               
Cow position:
               
chr18:7650083-7649716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
193-560
               

               
Cow position:
               
chr18:9366019-9365633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
193-560
               

               
Cow position:
               
chr18:46452784-46453158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
193-569
               

               
Cow position:
               
chr18:10904944-10904557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
194-566
               

               
Cow position:
               
chr18:47517106-47517493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
195-548
               

               
Cow position:
               
chr18:37381994-37382365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
195-566
               

               
Cow position:
               
chr18:3132676-3133028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
199, 23
               

               
Conread position:
               
196-560
               

               
Cow position:
               
chr18:21195238-21195618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
196-575
               

               
Cow position:
               
chr18:19620043-19619652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
197-410
               

               
Cow position:
               
chr18:1571145-1571351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
197-414
               

               
Cow position:
               
chr18:35535050-35535270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr18:46048850-46048490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 251
               

               
Conread position:
               
197-555
               

               
Cow position:
               
chr18:34527000-34527376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
197-572
               

               
Cow position:
               
chr18:45903799-45904184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
198-560
               

               
Cow position:
               
chr18:56181363-56181734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
198-575
               

               
Cow position:
               
chr18:11779745-11779371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
194, 18
               

               
Conread position:
               
199-396
               

               
Cow position:
               
chr18:25598136-25598342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
199-410
               

               
Cow position:
               
chr18:48713641-48713435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
199-571
               

               
Cow position:
               
chr18:22789993-22790366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 130
               

               
Conread position:
               
200-566
               

               
Cow position:
               
chr18:3417253-3416887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
203-460
               

               
Cow position:
               
chr18:15517087-15517348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
203-564
               

               
Cow position:
               
chr18:38687166-38686811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
205-489
               

               
Cow position:
               
chr18:54130239-54130520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 211
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr18:20641412-20641763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
206-560
               

               
Cow position:
               
chr18:56171928-56172299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
206-567
               

               
Cow position:
               
chr18:23630524-23630863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr18:31711477-31711668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
209-572
               

               
Cow position:
               
chr18:15173097-15172741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
210-560
               

               
Cow position:
               
chr18:20127024-20127381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
210-571
               

               
Cow position:
               
chr18:23424999-23424637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
211-410
               

               
Cow position:
               
chr18:49841360-49841164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 44
               

               
Conread position:
               
211-560
               

               
Cow position:
               
chr18:25282472-25282834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
211-569
               

               
Cow position:
               
chr18:35012235-35012595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
212-454
               

               
Cow position:
               
chr18:8171003-8171240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
149, 140
               

               
Conread position:
               
213-560
               

               
Cow position:
               
chr18:13507660-13508008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr18:20462615-20462809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 155
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr18:16686256-16686524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
216-541
               

               
Cow position:
               
chr18:19849679-19850011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 91
               

               
Conread position:
               
216-567
               

               
Cow position:
               
chr18:23766332-23766702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
217-410
               

               
Cow position:
               
chr18:52406769-52406587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
221-390
               

               
Cow position:
               
chr18:32252096-32252264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
221-393
               

               
Cow position:
               
chr18:35367122-35367284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr18:51594731-51594917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr18:2146506-2146703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 180
               

               
Conread position:
               
221-520
               

               
Cow position:
               
chr18:18592546-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 145
               

               
Conread position:
               
221-537
               

               
Cow position:
               
chr18:29648856-29648525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
221-551
               

               
Cow position:
               
chr18:29760100-29759781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
221-551
               

               
Cow position:
               
chr18:33159015-33158693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
175, 95
               

               
Conread position:
               
221-551
               

               
Cow position:
               
chr18:42432016-42432362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
221-558
               

               
Cow position:
               
chr18:28101705-28101349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
221-558
               

               
Cow position:
               
chr18:30794499-30794157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 68
               

               
Conread position:
               
221-559
               

               
Cow position:
               
chr18:9089772-9089427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:3158522-3158880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:10954539-10954195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:22568993-22569309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:29065312-29065651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:37002705-37002350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 137
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:45571085-45570742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 34
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr18:50637400-50637742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
221-566
               

               
Cow position:
               
chr18:49100295-49100657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
136, 152
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr18:7952276-7951913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
136, 90
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr18:12117779-12118137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr18:44801816-44802175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
173, 144
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr18:50082184-50082538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 132
               

               
Conread position:
               
222-475
               

               
Cow position:
               
chr18:52877433-52877181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
132, 170
               

               
Conread position:
               
222-513
               

               
Cow position:
               
chr18:42479512-42479824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
223-541
               

               
Cow position:
               
chr18:7952708-7952386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr18:12775714-12776052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
205, 17
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr18:19273026-19273380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
223-566
               

               
Cow position:
               
chr18:3180481-3180134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
159, 12
               

               
Conread position:
               
225-554
               

               
Cow position:
               
chr18:55696955-55697289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
225-569
               

               
Cow position:
               
chr18:23476618-23476959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
226-549
               

               
Cow position:
               
chr18:4757965-4758293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
227-560
               

               
Cow position:
               
chr18:29356557-29356908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 259
               

               
Conread position:
               
228-341
               

               
Cow position:
               
chr18:50632376-50632489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-391
               

               
Cow position:
               
chr18:32189441-32189607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
228-393
               

               
Cow position:
               
chr18:17660494-17660655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
228-396
               

               
Cow position:
               
chr18:43796889-43797054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
228-411
               

               
Cow position:
               
chr18:3370966-3370783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
228-415
               

               
Cow position:
               
chr18:49038528-49038340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
228-457
               

               
Cow position:
               
chr18:28930570-28930810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr18:51190533-51190780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
228-476
               

               
Cow position:
               
chr18:54111274-54111020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
228-513
               

               
Cow position:
               
chr18:10977145-10977443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
228-541
               

               
Cow position:
               
chr18:55782364-55782682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
228-557
               

               
Cow position:
               
chr18:47183227-47183560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
228-558
               

               
Cow position:
               
chr18:10656505-10656169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 249
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:4539816-4540151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:4666151-4666490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:9974262-9974604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 152
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:11377430-11377086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:11685048-11684711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 262
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:26939049-26938705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 268
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:33299970-33299619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 230
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr18:36458997-36458655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr18:51212249-51211897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
228-567
               

               
Cow position:
               
chr18:10891580-10891241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
228-568
               

               
Cow position:
               
chr18:12059063-12058730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr18:30360083-30360409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
170, 111
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr18:55788930-55789281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
158, 81
               

               
Conread position:
               
228-570
               

               
Cow position:
               
chr18:54973941-54974279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 95
               

               
Conread position:
               
228-575
               

               
Cow position:
               
chr18:6310148-6309785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
228-579
               

               
Cow position:
               
chr18:47512072-47511695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
133, 145
               

               
Conread position:
               
229-367
               

               
Cow position:
               
chr18:23505396-23505257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
229-555
               

               
Cow position:
               
chr18:15613795-15614122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
171, 129
               

               
Conread position:
               
229-560
               

               
Cow position:
               
chr18:37023485-37023835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
138, 334
               

               
Conread position:
               
229-560
               

               
Cow position:
               
chr18:38607286-38606957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
230-411
               

               
Cow position:
               
chr18:20798392-20798204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
230-555
               

               
Cow position:
               
chr18:55119939-55119600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr18:44262694-44262345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
230-560
               

               
Cow position:
               
chr18:10576175-10575833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 267
               

               
Conread position:
               
232-560
               

               
Cow position:
               
chr18:44483711-44484037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 133
               

               
Conread position:
               
232-567
               

               
Cow position:
               
chr18:55589430-55589761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
235-567
               

               
Cow position:
               
chr18:38985758-38985401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
235-572
               

               
Cow position:
               
chr18:50382307-50381965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
163, 75
               

               
Conread position:
               
236-569
               

               
Cow position:
               
chr18:3166431-3166776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
240-560
               

               
Cow position:
               
chr18:31586321-31586643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 16
               

               
Conread position:
               
241-556
               

               
Cow position:
               
chr18:20126358-20126028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
241-566
               

               
Cow position:
               
chr18:5578360-5578019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 53
               

               
Conread position:
               
241-567
               

               
Cow position:
               
chr18:21681920-21682256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
241-570
               

               
Cow position:
               
chr18:38344859-38344514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
241-572
               

               
Cow position:
               
chr18:13360107-13359770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
130, 142
               

               
Conread position:
               
243-566
               

               
Cow position:
               
chr18:11618519-11618197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
246-569
               

               
Cow position:
               
chr18:19193317-19193637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
169, 118
               

               
Conread position:
               
246-572
               

               
Cow position:
               
chr18:15025720-15025387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
247-572
               

               
Cow position:
               
chr18:43113898-43114212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
248-539
               

               
Cow position:
               
chr18:22055828-22056112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
197, 143
               

               
Conread position:
               
256-560
               

               
Cow position:
               
chr18:43950864-43950566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 141
               

               
Conread position:
               
256-571
               

               
Cow position:
               
chr18:51827319-51827000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 156
               

               
Conread position:
               
257-391
               

               
Cow position:
               
chr18:49015162-49015030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
257-541
               

               
Cow position:
               
chr18:12023600-12023893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
141, 73
               

               
Conread position:
               
257-559
               

               
Cow position:
               
chr18:17005297-17004972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr18:16227594-16227282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr18:29958127-29958425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
155, 92
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr18:30248102-30248405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
257-566
               

               
Cow position:
               
chr18:14815311-14815620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
257-567
               

               
Cow position:
               
chr18:6609820-6610144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
257-569
               

               
Cow position:
               
chr18:5487279-5486962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
257-572
               

               
Cow position:
               
chr18:11811985-11811687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
305, 18
               

               
Conread position:
               
257-577
               

               
Cow position:
               
chr18:25206151-25206489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
258-529
               

               
Cow position:
               
chr18:32883340-32883053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr18:3422733-3422441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr18:16134277-16134587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr18:19646211-19645896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr18:22120849-22121161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 232
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr18:39662815-39662499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 100
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr18:40759243-40758930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 97
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr18:45961235-45961545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
258-569
               

               
Cow position:
               
chr18:4182151-4182479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 97
               

               
Conread position:
               
259-559
               

               
Cow position:
               
chr18:55461671-55461987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 116
               

               
Conread position:
               
259-571
               

               
Cow position:
               
chr18:4368745-4369071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr18:2619179-2619420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
169, 97
               

               
Conread position:
               
260-560
               

               
Cow position:
               
chr18:7322759-7322454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
260-569
               

               
Cow position:
               
chr18:3027326-3027654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
260-577
               

               
Cow position:
               
chr18:11322630-11322292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
139, 99
               

               
Conread position:
               
261-555
               

               
Cow position:
               
chr18:56145703-56145403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
261-558
               

               
Cow position:
               
chr18:17657951-17657662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:4748849-4749162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:4927102-4926795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:6275844-6275537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:7965265-7964952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:9029643-9029339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:9558011-9557702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:46108355-46108657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:48513308-48513616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:49200666-49200361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr18:56159495-56159186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
130, 111
               

               
Conread position:
               
261-566
               

               
Cow position:
               
chr18:19143477-19143801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
261-567
               

               
Cow position:
               
chr18:4725457-4725767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr18:4625921-4625611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr18:42454989-42455309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr18:13172499-13172815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
81, 133
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr18:52637496-52637821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
261-591
               

               
Cow position:
               
chr18:3115486-3115148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
263-557
               

               
Cow position:
               
chr18:33843053-33843338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
263-566
               

               
Cow position:
               
chr18:31997483-31997196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr18:51691431-51691763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
269-560
               

               
Cow position:
               
chr18:8104914-8105222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 216
               

               
Conread position:
               
271-559
               

               
Cow position:
               
chr18:33407640-33407333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
121, 292
               

               
Conread position:
               
271-572
               

               
Cow position:
               
chr18:11832143-11831846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
276-560
               

               
Cow position:
               
chr18:6103079-6103393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 199
               

               
Conread position:
               
276-560
               

               
Cow position:
               
chr18:14048727-14048434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
123, 232
               

               
Conread position:
               
277-577
               

               
Cow position:
               
chr18:16417689-16417993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
282-411
               

               
Cow position:
               
chr18:29991498-29991629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
284-571
               

               
Cow position:
               
chr18:56361593-56361893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
286-579
               

               
Cow position:
               
chr18:48453696-48453397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
287-573
               

               
Cow position:
               
chr18:267809-268104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
111, 7
               

               
Conread position:
               
290-567
               

               
Cow position:
               
chr18:20481878-20482158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
290-577
               

               
Cow position:
               
chr18:7487254-7486955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
292-548
               

               
Cow position:
               
chr18:36187541-36187799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
294-575
               

               
Cow position:
               
chr18:50993269-50993565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
298-571
               

               
Cow position:
               
chr18:23652624-23652904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
299-539
               

               
Cow position:
               
chr18:54031698-54031448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
303-560
               

               
Cow position:
               
chr18:56150652-56150935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
307-560
               

               
Cow position:
               
chr18:37690650-37690885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
311-560
               

               
Cow position:
               
chr18:34324967-34325237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
311-591
               

               
Cow position:
               
chr18:81730-81443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
314-560
               

               
Cow position:
               
chr18:52658392-52658141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
321-560
               

               
Cow position:
               
chr18:29388195-29387948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
350-567
               

               
Cow position:
               
chr18:37702913-37703130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
354-567
               

               
Cow position:
               
chr18:41271032-41270802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
361-560
               

               
Cow position:
               
chr18:16439325-16439128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
112, 88
               

               
Conread position:
               
375-555
               

               
Cow position:
               
chr18:55584159-55584351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
381-566
               

               
Cow position:
               
chr18:52869096-52868909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
381-572
               

               
Cow position:
               
chr18:52632507-52632697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
382-542
               

               
Cow position:
               
chr18:17669909-17670063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
382-556
               

               
Cow position:
               
chr18:5711774-5711943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
382-566
               

               
Cow position:
               
chr18:23807980-23808158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
382-583
               

               
Cow position:
               
chr18:9806310-9806109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
384-560
               

               
Cow position:
               
chr18:7359630-7359455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
384-566
               

               
Cow position:
               
chr18:55498956-55498781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
384-572
               

               
Cow position:
               
chr18:14586580-14586768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr18:2569691-2569521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr18:33272832-33272666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr18:48549890-48549713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
399-612
               

               
Cow position:
               
chr18:43640635-43640425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
187, 19
               

               
Conread position:
               
400-566
               

               
Cow position:
               
chr18:29264576-29264736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
400-567
               

               
Cow position:
               
chr18:9846558-9846720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
404-569
               

               
Cow position:
               
chr18:27078719-27078560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
405-577
               

               
Cow position:
               
chr18:51298350-51298184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr18:39279123-39279276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-566
               

               
Cow position:
               
chr18:54572422-54572581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
408-517
               

               
Cow position:
               
chr18:33882787-33882894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
408-540
               

               
Cow position:
               
chr18:7059098-7058970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
408-540
               

               
Cow position:
               
chr18:8164168-8164299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
408-540
               

               
Cow position:
               
chr18:24734991-24734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-548
               

               
Cow position:
               
chr18:20797968-20797833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
408-549
               

               
Cow position:
               
chr18:19761570-19761430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
408-549
               

               
Cow position:
               
chr18:52402647-52402786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr18:19362416-19362565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr18:20998747-20998892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr18:33606500-33606358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
408-557
               

               
Cow position:
               
chr18:2592299-2592449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
408-558
               

               
Cow position:
               
chr18:49543345-49543201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr18:23447212-23447360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr18:35535414-35535563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr18:43823077-43823231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr18:47314420-47314572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:2608858-2609008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:11233302-11233152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:11671682-11671531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:13293379-13293231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:24834721-24834872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 5
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:26286779-26286634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:29371738-29371589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:35295435-35295284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:36445308-36445153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:47868329-47868176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:48407662-48407510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr18:51178876-51179024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr18:18627453-18627612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr18:15880989-15881143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr18:32873463-32873297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr18:39709760-39709604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr18:17380439-17380286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr18:27388422-27388257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr18:11166849-11166687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr18:35827541-35827707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr18:45395875-45395709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr18:20271151-20271317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
408-583
               

               
Cow position:
               
chr18:56163456-56163284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
153, 58
               

               
Conread position:
               
409-541
               

               
Cow position:
               
chr18:35582233-35582362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
409-559
               

               
Cow position:
               
chr18:5457394-5457538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr18:32860512-32860369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr18:35058207-35058062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
409-562
               

               
Cow position:
               
chr18:8967868-8967716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
409-567
               

               
Cow position:
               
chr18:19124048-19123889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
409-571
               

               
Cow position:
               
chr18:48290568-48290729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
409-572
               

               
Cow position:
               
chr18:4316179-4316015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
409-572
               

               
Cow position:
               
chr18:27429316-27429151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
409-632
               

               
Cow position:
               
chr18:30673768-30673994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
410-559
               

               
Cow position:
               
chr18:39115272-39115422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr18:238476-238623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr18:6290654-6290505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr18:11680591-11680441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr18:36098068-36097922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
410-567
               

               
Cow position:
               
chr18:4707416-4707574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
412-560
               

               
Cow position:
               
chr18:18957924-18958070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
413-559
               

               
Cow position:
               
chr18:43564094-43563949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
413-560
               

               
Cow position:
               
chr18:2270636-2270782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
413-560
               

               
Cow position:
               
chr18:7076633-7076484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
413-569
               

               
Cow position:
               
chr18:24048107-24047959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
415-560
               

               
Cow position:
               
chr18:5991364-5991219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
415-560
               

               
Cow position:
               
chr18:46135178-46135041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
415-560
               

               
Cow position:
               
chr18:48818383-48818528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
420-583
               

               
Cow position:
               
chr18:29649830-29649994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 144
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chr18:36264930-36265062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
422-559
               

               
Cow position:
               
chr18:51595182-51595318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
424-556
               

               
Cow position:
               
chr18:3044287-3044155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 107
               

               
Conread position:
               
424-557
               

               
Cow position:
               
chr18:35472082-35472213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
424-558
               

               
Cow position:
               
chr18:26586807-26586942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
424-559
               

               
Cow position:
               
chr18:20864840-20864705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr18:4624581-4624708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr18:5247666-5247798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr18:18976941-18976805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr18:19831145-19831018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr18:34621510-34621643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
424-567
               

               
Cow position:
               
chr18:49660189-49660326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
424-581
               

               
Cow position:
               
chr18:55552822-55552662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
424-582
               

               
Cow position:
               
chr18:22065507-22065665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
424-582
               

               
Cow position:
               
chr18:43065367-43065205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
424-582
               

               
Cow position:
               
chr18:47779309-47779154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
427-566
               

               
Cow position:
               
chr18:19640652-19640513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-560
               

               
Cow position:
               
chr18:26998717-26998585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-560
               

               
Cow position:
               
chr18:49161603-49161735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-575
               

               
Cow position:
               
chr18:51712856-51713004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
430-560
               

               
Cow position:
               
chr18:38670263-38670392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
439-560
               

               
Cow position:
               
chr18:52899909-52899788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
530-898
               

               
Cow position:
               
chr18:36310727-36310341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
537-897
               

               
Cow position:
               
chr18:16151495-16151149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
541-898
               

               
Cow position:
               
chr18:54032710-54032346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
548-898
               

               
Cow position:
               
chr18:38090371-38090720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
552-898
               

               
Cow position:
               
chr18:17670960-17671296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr18:6459836-6459509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
281, 37
               

               
Conread position:
               
563-885
               

               
Cow position:
               
chr18:33271612-33271291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
563-888
               

               
Cow position:
               
chr18:16274749-16275075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 123
               

               
Conread position:
               
564-829
               

               
Cow position:
               
chr18:48390894-48390629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
564-864
               

               
Cow position:
               
chr18:52574087-52573783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
564-892
               

               
Cow position:
               
chr18:51459870-51460204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
564-897
               

               
Cow position:
               
chr18:32164960-32165296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-897
               

               
Cow position:
               
chr18:54167677-54168012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:603493-603829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:10222002-10221665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:11271872-11272210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:11869458-11869121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:16081498-16081161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:16463898-16464231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:17943515-17943177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:18216481-18216144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:22182566-22182893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:24619400-24619062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:26243609-26243942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:29071394-29071063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
209, 96
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:32437130-32437466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:47744723-47744386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:52630286-52630623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr18:54066077-54066415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
564-900
               

               
Cow position:
               
chr18:22681761-22681432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
577-888
               

               
Cow position:
               
chr18:26549726-26549417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr18:36776234-36775911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr18:55417683-55417360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
578-900
               

               
Cow position:
               
chr18:51846461-51846146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
582-840
               

               
Cow position:
               
chr18:9981573-9981319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-861
               

               
Cow position:
               
chr18:37583505-37583787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-895
               

               
Cow position:
               
chr18:39411794-39411486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
582-897
               

               
Cow position:
               
chr18:36511571-36511257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-897
               

               
Cow position:
               
chr18:40483949-40483628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:3755898-3755580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:5535927-5535624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:16092773-16092454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:16173659-16173975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:23801977-23801658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:28928636-28928955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:28969332-28969651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:29863651-29863970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:37508920-37508600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:37700539-37700858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:45400108-45399796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr18:51345059-51344740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-900
               

               
Cow position:
               
chr18:12248655-12248329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
582-900
               

               
Cow position:
               
chr18:44403765-44403457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
586-898
               

               
Cow position:
               
chr18:25957721-25957405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
594-887
               

               
Cow position:
               
chr18:18475861-18476154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
608-840
               

               
Cow position:
               
chr18:12399789-12400019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
608-862
               

               
Cow position:
               
chr18:16472235-16472493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
608-874
               

               
Cow position:
               
chr18:51273193-51273453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
638-791
               

               
Cow position:
               
chr18:49782383-49782535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-896
               

               
Cow position:
               
chr18:17095703-17095452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-897
               

               
Cow position:
               
chr18:16871168-16870914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr18:36252799-36253051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr18:51663045-51662785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr18:56483782-56484042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr18:22412283-22412031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr18:28210899-28211152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr18:29240027-29239773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr18:37155873-37156108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
687-898
               

               
Cow position:
               
chr18:37540556-37540347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr18:36648013-36647808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr18:39293181-39293386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
706-898
               

               
Cow position:
               
chr18:28674450-28674643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
713-889
               

               
Cow position:
               
chr18:36209536-36209710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr18:5202349-5202162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
714-897
               

               
Cow position:
               
chr18:17998105-17998277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
718-894
               

               
Cow position:
               
chr18:37560379-37560207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
726-900
               

               
Cow position:
               
chr18:33344922-33344752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 23
               
Show alignments to all cow chromosomes.