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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_002410.5.5
        

               
Conread position:
               
87-558
               

               
Cow position:
               
chr20:23870532-23871017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
89-410
               

               
Cow position:
               
chr20:38515058-38514743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
89-557
               

               
Cow position:
               
chr20:29845326-29844854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr20:12995733-12996223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
97-367
               

               
Cow position:
               
chr20:2819796-2819548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
99-558
               

               
Cow position:
               
chr20:5827213-5826735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
99-571
               

               
Cow position:
               
chr20:10200623-10200125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
59, 166
               

               
Conread position:
               
103-514
               

               
Cow position:
               
chr20:20242355-20241942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 189
               

               
Conread position:
               
104-560
               

               
Cow position:
               
chr20:28982958-28982494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
252, 24
               

               
Conread position:
               
110-410
               

               
Cow position:
               
chr20:38090172-38089873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
114-558
               

               
Cow position:
               
chr20:18392020-18392443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
144-559
               

               
Cow position:
               
chr20:15565609-15566034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
247, 47
               

               
Conread position:
               
144-560
               

               
Cow position:
               
chr20:23064610-23065036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
222, 74
               

               
Conread position:
               
151-560
               

               
Cow position:
               
chr20:38578550-38578958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
174-572
               

               
Cow position:
               
chr20:15760749-15761165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
178-577
               

               
Cow position:
               
chr20:32847532-32847130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
184-572
               

               
Cow position:
               
chr20:39398662-39398272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
231, 36
               

               
Conread position:
               
185-413
               

               
Cow position:
               
chr20:22978507-22978285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
186-560
               

               
Cow position:
               
chr20:12420439-12420825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 30
               

               
Conread position:
               
187-560
               

               
Cow position:
               
chr20:5998484-5998870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
187-582
               

               
Cow position:
               
chr20:9537310-9536905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
192-560
               

               
Cow position:
               
chr20:6240348-6240733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
193-569
               

               
Cow position:
               
chr20:25009460-25009857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
194-534
               

               
Cow position:
               
chr20:27407722-27408056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
195-358
               

               
Cow position:
               
chr20:15766287-15766123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
195-452
               

               
Cow position:
               
chr20:18379550-18379282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
172, 30
               

               
Conread position:
               
195-511
               

               
Cow position:
               
chr20:5636658-5636325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
195-526
               

               
Cow position:
               
chr20:3255207-3254878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
195-559
               

               
Cow position:
               
chr20:9412658-9412293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
195-569
               

               
Cow position:
               
chr20:28605379-28604992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
197-406
               

               
Cow position:
               
chr20:21815729-21815526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 23
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr20:13269785-13269421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
197-572
               

               
Cow position:
               
chr20:4621183-4621556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr20:398140-398496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
199-566
               

               
Cow position:
               
chr20:580754-581131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
201-572
               

               
Cow position:
               
chr20:35365206-35364835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
203-551
               

               
Cow position:
               
chr20:11542119-11542479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
203-560
               

               
Cow position:
               
chr20:40177407-40177048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
205-571
               

               
Cow position:
               
chr20:14879949-14879570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
207-554
               

               
Cow position:
               
chr20:8556111-8556472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr20:8308180-8307967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
209-520
               

               
Cow position:
               
chr20:13652206-13652521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
189, 144
               

               
Conread position:
               
211-560
               

               
Cow position:
               
chr20:19459509-19459848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
211-560
               

               
Cow position:
               
chr20:26057925-26058272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
332, 0
               

               
Conread position:
               
212-571
               

               
Cow position:
               
chr20:12581796-12582163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 240
               

               
Conread position:
               
215-560
               

               
Cow position:
               
chr20:14620147-14620476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
216-513
               

               
Cow position:
               
chr20:2169569-2169865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
151, 107
               

               
Conread position:
               
216-560
               

               
Cow position:
               
chr20:23792758-23792400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 124
               

               
Conread position:
               
217-410
               

               
Cow position:
               
chr20:7624092-7624291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 145
               

               
Conread position:
               
219-396
               

               
Cow position:
               
chr20:6358770-6358590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
220-561
               

               
Cow position:
               
chr20:22065216-22064865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
221-396
               

               
Cow position:
               
chr20:7738082-7738251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr20:8547215-8546949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr20:32463375-32463640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
174, 85
               

               
Conread position:
               
221-541
               

               
Cow position:
               
chr20:36207963-36207617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
108, 234
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr20:17846107-17845756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 7
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr20:38768314-38768657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 66
               

               
Conread position:
               
221-561
               

               
Cow position:
               
chr20:24069954-24069607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
221-566
               

               
Cow position:
               
chr20:19363214-19363572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
221-567
               

               
Cow position:
               
chr20:22235461-22235103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr20:5702873-5702531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 171
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr20:10208957-10208590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr20:7426048-7426406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
221-577
               

               
Cow position:
               
chr20:14759516-14759886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
196, 236
               

               
Conread position:
               
221-577
               

               
Cow position:
               
chr20:31746487-31746845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 235
               

               
Conread position:
               
222-410
               

               
Cow position:
               
chr20:39266810-39266997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 81
               

               
Conread position:
               
222-493
               

               
Cow position:
               
chr20:14540491-14540210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
222-494
               

               
Cow position:
               
chr20:9266959-9267239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
222-549
               

               
Cow position:
               
chr20:6603189-6602848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
136, 99
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr20:17670331-17669978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr20:18320646-18321001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr20:23163756-23164074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr20:28296442-28296086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
225-410
               

               
Cow position:
               
chr20:17100507-17100322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
225-560
               

               
Cow position:
               
chr20:10818095-10818428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
226-553
               

               
Cow position:
               
chr20:39743454-39743117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
226-571
               

               
Cow position:
               
chr20:29805515-29805873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
226-580
               

               
Cow position:
               
chr20:20203361-20202991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr20:8620007-8620195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr20:22485001-22484824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
228-415
               

               
Cow position:
               
chr20:21204495-21204316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
228-415
               

               
Cow position:
               
chr20:22030462-22030276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
228-478
               

               
Cow position:
               
chr20:25161983-25162254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
228-505
               

               
Cow position:
               
chr20:28441469-28441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
228-540
               

               
Cow position:
               
chr20:14980363-14980698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 332
               

               
Conread position:
               
228-548
               

               
Cow position:
               
chr20:12239541-12239872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
228-548
               

               
Cow position:
               
chr20:28067282-28067618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
228-554
               

               
Cow position:
               
chr20:33144411-33144753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
157, 131
               

               
Conread position:
               
228-559
               

               
Cow position:
               
chr20:10235973-10235649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 97
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:6096353-6096689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
163, 125
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:9433729-9433398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
209, 268
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:11550508-11550162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:19751449-19751105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
161, 131
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:26996671-26996330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:33363660-33363316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 239
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr20:40511614-40511961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 107
               

               
Conread position:
               
228-567
               

               
Cow position:
               
chr20:21372450-21372104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
228-570
               

               
Cow position:
               
chr20:14807029-14806671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 253
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr20:39728593-39728233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr20:40422961-40423306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
228-572
               

               
Cow position:
               
chr20:23846522-23846886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 252
               

               
Conread position:
               
228-582
               

               
Cow position:
               
chr20:1640312-1640676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
229-529
               

               
Cow position:
               
chr20:16935174-16935476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
230-560
               

               
Cow position:
               
chr20:13752365-13752037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 166
               

               
Conread position:
               
230-566
               

               
Cow position:
               
chr20:8578389-8578036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 145
               

               
Conread position:
               
235-388
               

               
Cow position:
               
chr20:1009571-1009722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
237-558
               

               
Cow position:
               
chr20:3599267-3599592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
162, 52
               

               
Conread position:
               
238-549
               

               
Cow position:
               
chr20:32083950-32084277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
240-541
               

               
Cow position:
               
chr20:37165840-37165541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
168, 67
               

               
Conread position:
               
240-571
               

               
Cow position:
               
chr20:35842996-35843328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr20:33532432-33532107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
155, 103
               

               
Conread position:
               
246-560
               

               
Cow position:
               
chr20:34777304-34776982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
246-560
               

               
Cow position:
               
chr20:38551492-38551170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
247-560
               

               
Cow position:
               
chr20:16715515-16715196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
247-569
               

               
Cow position:
               
chr20:35797732-35797392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
257-519
               

               
Cow position:
               
chr20:15312787-15312496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
257-549
               

               
Cow position:
               
chr20:3606848-3607147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr20:382019-382331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr20:4206085-4205759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr20:6257945-6258267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 304
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr20:11482021-11482343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr20:14572250-14572560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
257-572
               

               
Cow position:
               
chr20:15548783-15549114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 233
               

               
Conread position:
               
258-479
               

               
Cow position:
               
chr20:2298674-2298904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
258-538
               

               
Cow position:
               
chr20:41028601-41028301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
258-548
               

               
Cow position:
               
chr20:20967433-20967148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
112, 138
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr20:25686236-25686549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
258-558
               

               
Cow position:
               
chr20:6903426-6903127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:5950531-5950836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 176
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:8429859-8429541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 303
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:9706807-9707101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:24398534-24398836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 207
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:26077194-26076881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:31740107-31740419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 222
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr20:34202747-34202443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
258-591
               

               
Cow position:
               
chr20:7806457-7806800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
259-558
               

               
Cow position:
               
chr20:8702806-8703108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
259-560
               

               
Cow position:
               
chr20:22313049-22313363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 238
               

               
Conread position:
               
259-569
               

               
Cow position:
               
chr20:39518118-39517799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
136, 96
               

               
Conread position:
               
261-524
               

               
Cow position:
               
chr20:7211148-7210867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
261-552
               

               
Cow position:
               
chr20:35176668-35176965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr20:9014238-9014552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr20:31927353-31927662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 155
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr20:39325500-39325181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
261-566
               

               
Cow position:
               
chr20:13023393-13023689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
261-566
               

               
Cow position:
               
chr20:39415859-39415536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
261-567
               

               
Cow position:
               
chr20:12441588-12441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr20:11340695-11341019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
261-580
               

               
Cow position:
               
chr20:39675297-39675618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
262-560
               

               
Cow position:
               
chr20:4755725-4756029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr20:13821472-13821786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
264-573
               

               
Cow position:
               
chr20:6890820-6890487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 94
               

               
Conread position:
               
265-560
               

               
Cow position:
               
chr20:18551467-18551159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
265-586
               

               
Cow position:
               
chr20:19266259-19265928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
268-552
               

               
Cow position:
               
chr20:8606830-8607116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
268-560
               

               
Cow position:
               
chr20:20471887-20471586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
269-577
               

               
Cow position:
               
chr20:39019797-39019474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 184
               

               
Conread position:
               
276-513
               

               
Cow position:
               
chr20:10788796-10789023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
276-555
               

               
Cow position:
               
chr20:35958742-35958446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
91, 218
               

               
Conread position:
               
278-560
               

               
Cow position:
               
chr20:23505920-23505625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
118, 177
               

               
Conread position:
               
279-560
               

               
Cow position:
               
chr20:32668065-32667786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
283-560
               

               
Cow position:
               
chr20:3502354-3502090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
284-560
               

               
Cow position:
               
chr20:12155037-12155303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
285-555
               

               
Cow position:
               
chr20:39377081-39377344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
189, 77
               

               
Conread position:
               
285-560
               

               
Cow position:
               
chr20:24868946-24869232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
285-566
               

               
Cow position:
               
chr20:13967171-13967469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 203
               

               
Conread position:
               
290-560
               

               
Cow position:
               
chr20:22704375-22704084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
293-591
               

               
Cow position:
               
chr20:16788488-16788200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
294-540
               

               
Cow position:
               
chr20:11864057-11864320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
294-540
               

               
Cow position:
               
chr20:34365104-34364851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
295-525
               

               
Cow position:
               
chr20:28832047-28831794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
296-560
               

               
Cow position:
               
chr20:32577843-32578124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
299-543
               

               
Cow position:
               
chr20:38027944-38028193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
299-549
               

               
Cow position:
               
chr20:18423772-18423528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
299-560
               

               
Cow position:
               
chr20:13048358-13048622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
308-577
               

               
Cow position:
               
chr20:18618698-18618417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
313-560
               

               
Cow position:
               
chr20:18185624-18185375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
313-569
               

               
Cow position:
               
chr20:15593355-15593083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 181
               

               
Conread position:
               
314-560
               

               
Cow position:
               
chr20:3427191-3426953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
350-560
               

               
Cow position:
               
chr20:22445616-22445838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
351-579
               

               
Cow position:
               
chr20:19667960-19667737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
353-572
               

               
Cow position:
               
chr20:18491192-18490970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
358-566
               

               
Cow position:
               
chr20:21767391-21767600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 146
               

               
Conread position:
               
361-560
               

               
Cow position:
               
chr20:36997719-36997510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
362-570
               

               
Cow position:
               
chr20:27566010-27565806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
364-560
               

               
Cow position:
               
chr20:5116308-5116508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
370-558
               

               
Cow position:
               
chr20:35921886-35922069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
377-571
               

               
Cow position:
               
chr20:5576746-5576552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
379-560
               

               
Cow position:
               
chr20:38486568-38486752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
382-554
               

               
Cow position:
               
chr20:11043534-11043695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
382-560
               

               
Cow position:
               
chr20:20557681-20557858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
383-566
               

               
Cow position:
               
chr20:7182705-7182887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
383-569
               

               
Cow position:
               
chr20:35897486-35897305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
384-560
               

               
Cow position:
               
chr20:10178138-10178315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
384-568
               

               
Cow position:
               
chr20:10687748-10687565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 6
               

               
Conread position:
               
384-577
               

               
Cow position:
               
chr20:19238462-19238652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
388-582
               

               
Cow position:
               
chr20:4892936-4893124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
394-559
               

               
Cow position:
               
chr20:16941364-16941526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
399-582
               

               
Cow position:
               
chr20:14403024-14403204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
405-570
               

               
Cow position:
               
chr20:35760617-35760457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
406-566
               

               
Cow position:
               
chr20:32167892-32168055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
407-558
               

               
Cow position:
               
chr20:20351041-20351191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr20:22029888-22029734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr20:29754731-29754582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
407-564
               

               
Cow position:
               
chr20:34098013-34098166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
407-571
               

               
Cow position:
               
chr20:27977760-27977926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
408-547
               

               
Cow position:
               
chr20:13994758-13994618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
408-552
               

               
Cow position:
               
chr20:26469119-26469261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
408-552
               

               
Cow position:
               
chr20:32068908-32069053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
408-556
               

               
Cow position:
               
chr20:10884413-10884566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-556
               

               
Cow position:
               
chr20:23850228-23850084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
408-557
               

               
Cow position:
               
chr20:8020842-8020694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr20:24902518-24902675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:1139831-1139977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:3781482-3781631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:6054571-6054716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:6848572-6848418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:7442183-7442328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:13876759-13876912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:14756123-14756271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:15235713-15235560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 138
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:22959397-22959545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:23679203-23679350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:24521696-24521547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:27340009-27339863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:32636622-32636769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:36331480-36331632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr20:36779786-36779934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr20:6501749-6501589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr20:19146819-19146660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr20:40256915-40256760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr20:35970890-35970730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
408-569
               

               
Cow position:
               
chr20:20312802-20312951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 58
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr20:11741356-11741519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 135
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr20:10469010-10468854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr20:10913384-10913551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr20:17733830-17733990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr20:19313118-19313282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
408-573
               

               
Cow position:
               
chr20:26680070-26679906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr20:9379354-9379185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr20:14735620-14735455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr20:22007447-22007282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
408-579
               

               
Cow position:
               
chr20:5269124-5269291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
408-581
               

               
Cow position:
               
chr20:35907107-35907271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr20:10838274-10838423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr20:14831670-14831817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr20:15582090-15582240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr20:18399705-18399557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
409-566
               

               
Cow position:
               
chr20:4781509-4781351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
409-569
               

               
Cow position:
               
chr20:21019507-21019351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
409-572
               

               
Cow position:
               
chr20:31464433-31464598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr20:15777208-15777359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr20:17904102-17903952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
137, 71
               

               
Conread position:
               
413-555
               

               
Cow position:
               
chr20:33435229-33435368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
413-576
               

               
Cow position:
               
chr20:12041205-12041366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
413-576
               

               
Cow position:
               
chr20:19351825-19351986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 129
               

               
Conread position:
               
415-540
               

               
Cow position:
               
chr20:39212741-39212621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
417-567
               

               
Cow position:
               
chr20:32866407-32866557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-541
               

               
Cow position:
               
chr20:19369235-19369362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
420-560
               

               
Cow position:
               
chr20:7710277-7710411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
421-571
               

               
Cow position:
               
chr20:21345346-21345190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
422-567
               

               
Cow position:
               
chr20:7132282-7132137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-560
               

               
Cow position:
               
chr20:7756700-7756833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
424-551
               

               
Cow position:
               
chr20:13829193-13829069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
424-559
               

               
Cow position:
               
chr20:33178592-33178729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:3035026-3034890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:11614111-11614247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:14718813-14718944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:16291402-16291267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
118, 49
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:17251637-17251507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:23936485-23936619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:35145941-35145803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr20:39050247-39050383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-566
               

               
Cow position:
               
chr20:33177111-33176971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
424-566
               

               
Cow position:
               
chr20:35113463-35113320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
424-569
               

               
Cow position:
               
chr20:12064559-12064416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 103
               

               
Conread position:
               
424-569
               

               
Cow position:
               
chr20:12784125-12783983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
424-569
               

               
Cow position:
               
chr20:24363571-24363425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
424-572
               

               
Cow position:
               
chr20:18100345-18100202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
425-591
               

               
Cow position:
               
chr20:31148014-31147858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr20:3331364-3331498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr20:41704084-41703950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-567
               

               
Cow position:
               
chr20:34251757-34251889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
428-560
               

               
Cow position:
               
chr20:12839981-12839853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
428-560
               

               
Cow position:
               
chr20:13267505-13267637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-569
               

               
Cow position:
               
chr20:15117967-15117834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
441-548
               

               
Cow position:
               
chr20:32830018-32829911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
527-892
               

               
Cow position:
               
chr20:10494180-10493817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
557-889
               

               
Cow position:
               
chr20:13062783-13062463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
559-898
               

               
Cow position:
               
chr20:35131955-35131613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
560-775
               

               
Cow position:
               
chr20:9338966-9338753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
560-810
               

               
Cow position:
               
chr20:14721431-14721672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
202, 62
               

               
Conread position:
               
560-897
               

               
Cow position:
               
chr20:35159636-35159976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr20:35108243-35108584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
561-871
               

               
Cow position:
               
chr20:23900305-23900006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr20:5270228-5270561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:825720-825383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:3808829-3809166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:6136049-6136386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:8970951-8971288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:13506618-13506955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:14925702-14926039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:16559601-16559938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:19440856-19440518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:24542366-24542029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:24568329-24568666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:28294252-28293922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:28444408-28444744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:30385306-30385645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:30431212-30430875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr20:32125651-32125984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr20:39234158-39233834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
579-896
               

               
Cow position:
               
chr20:28724682-28724362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
582-884
               

               
Cow position:
               
chr20:40544561-40544253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr20:35127593-35127276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:3307758-3307451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:5936084-5936390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:7597935-7598254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:12435473-12435793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:13575794-13576112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:18356153-18355834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:23804957-23805274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:28163965-28163648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:38957060-38956741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr20:42085455-42085136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
596-898
               

               
Cow position:
               
chr20:20440043-20440348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
638-880
               

               
Cow position:
               
chr20:36053213-36053440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr20:2653992-2653737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr20:12047373-12047118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr20:12568447-12568708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr20:14757394-14757652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr20:30578751-30578491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-899
               

               
Cow position:
               
chr20:28561021-28561282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 56
               

               
Conread position:
               
642-900
               

               
Cow position:
               
chr20:2179894-2180150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
643-896
               

               
Cow position:
               
chr20:37955978-37956212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr20:870155-870400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
199, 40
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr20:5793735-5793482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr20:7810976-7811229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr20:14867525-14867779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr20:21397378-21397126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr20:35019776-35019525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
643-900
               

               
Cow position:
               
chr20:28102176-28101924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
199, 40
               

               
Conread position:
               
645-898
               

               
Cow position:
               
chr20:29054196-29053944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
647-898
               

               
Cow position:
               
chr20:21719421-21719172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
651-898
               

               
Cow position:
               
chr20:30461212-30461446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
654-900
               

               
Cow position:
               
chr20:35844471-35844710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
657-900
               

               
Cow position:
               
chr20:4772533-4772300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
660-897
               

               
Cow position:
               
chr20:12685741-12685975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr20:752956-752751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr20:8201007-8200820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 74
               
Show alignments to all cow chromosomes.