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Cow genome map

           
Conread name:
           
Ss1.1-rcbl0_002410.5.5
        

               
Conread position:
               
84-559
               

               
Cow position:
               
chr3:50768896-50768410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
88-375
               

               
Cow position:
               
chr3:74801849-74802139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
88-560
               

               
Cow position:
               
chr3:21302249-21302701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
89-447
               

               
Cow position:
               
chr3:53508836-53508460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 271
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr3:76415691-76415924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
90-560
               

               
Cow position:
               
chr3:53428710-53429161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
92-566
               

               
Cow position:
               
chr3:70565523-70566014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 270
               

               
Conread position:
               
93-418
               

               
Cow position:
               
chr3:73237398-73237080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
93-538
               

               
Cow position:
               
chr3:2680724-2680263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 167
               

               
Conread position:
               
95-495
               

               
Cow position:
               
chr3:57760707-57760293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
97-560
               

               
Cow position:
               
chr3:65969359-65968885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
97-560
               

               
Cow position:
               
chr3:78945637-78946109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
98-395
               

               
Cow position:
               
chr3:49363303-49363024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
98-433
               

               
Cow position:
               
chr3:62788973-62789305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
98-560
               

               
Cow position:
               
chr3:59605040-59604601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
101-560
               

               
Cow position:
               
chr3:83491288-83490806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
103-409
               

               
Cow position:
               
chr3:10677434-10677743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 196
               

               
Conread position:
               
103-571
               

               
Cow position:
               
chr3:27274720-27274258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
259, 18
               

               
Conread position:
               
104-560
               

               
Cow position:
               
chr3:80072320-80071847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
104-577
               

               
Cow position:
               
chr3:22716098-22716569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
106-540
               

               
Cow position:
               
chr3:15752444-15752878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
106-560
               

               
Cow position:
               
chr3:49383147-49382682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 320
               

               
Conread position:
               
111-560
               

               
Cow position:
               
chr3:39969674-39970142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
131-391
               

               
Cow position:
               
chr3:19682856-19682605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
131-394
               

               
Cow position:
               
chr3:74243179-74242904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr3:1037178-1036920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
273, 67
               

               
Conread position:
               
131-538
               

               
Cow position:
               
chr3:55947749-55947327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
131-571
               

               
Cow position:
               
chr3:27290109-27289655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr3:17235056-17235315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
174, 73
               

               
Conread position:
               
137-560
               

               
Cow position:
               
chr3:83474898-83474479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr3:20334135-20333937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
175-554
               

               
Cow position:
               
chr3:73461098-73460715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
175-560
               

               
Cow position:
               
chr3:59692011-59691634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr3:70609749-70609407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
176-566
               

               
Cow position:
               
chr3:68627564-68627951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 40
               

               
Conread position:
               
178-527
               

               
Cow position:
               
chr3:27940021-27940365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
179-391
               

               
Cow position:
               
chr3:15173200-15172991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
179-560
               

               
Cow position:
               
chr3:73442977-73443357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 41
               

               
Conread position:
               
180-572
               

               
Cow position:
               
chr3:55189637-55190033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
181-560
               

               
Cow position:
               
chr3:51604492-51604877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
183-573
               

               
Cow position:
               
chr3:26681699-26682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
185-548
               

               
Cow position:
               
chr3:17934820-17935181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
171, 185
               

               
Conread position:
               
186-505
               

               
Cow position:
               
chr3:74134816-74134490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 34
               

               
Conread position:
               
187-537
               

               
Cow position:
               
chr3:3738592-3738237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
176, 33
               

               
Conread position:
               
189-410
               

               
Cow position:
               
chr3:79196871-79196648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 26
               

               
Conread position:
               
189-517
               

               
Cow position:
               
chr3:15506562-15506220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 94
               

               
Conread position:
               
189-560
               

               
Cow position:
               
chr3:18067241-18066864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
201, 31
               

               
Conread position:
               
191-410
               

               
Cow position:
               
chr3:22165309-22165523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
191-521
               

               
Cow position:
               
chr3:78092405-78092740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
191-538
               

               
Cow position:
               
chr3:44932620-44932260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 29
               

               
Conread position:
               
191-546
               

               
Cow position:
               
chr3:13507577-13507207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
160, 34
               

               
Conread position:
               
191-555
               

               
Cow position:
               
chr3:73395223-73394851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
205, 43
               

               
Conread position:
               
191-560
               

               
Cow position:
               
chr3:10958133-10958498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
191-560
               

               
Cow position:
               
chr3:12711808-12712193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
191-560
               

               
Cow position:
               
chr3:68303424-68303058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
191-571
               

               
Cow position:
               
chr3:14601597-14601995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
191-571
               

               
Cow position:
               
chr3:17222032-17222426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
193-362
               

               
Cow position:
               
chr3:49344801-49344634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
193-397
               

               
Cow position:
               
chr3:69785516-69785719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr3:19626401-19626612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr3:19585970-19585756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
177, 22
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr3:78093284-78093489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
193-538
               

               
Cow position:
               
chr3:59610612-59610972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
193-549
               

               
Cow position:
               
chr3:7337679-7338033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 22
               

               
Conread position:
               
193-549
               

               
Cow position:
               
chr3:52608287-52607924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
193-552
               

               
Cow position:
               
chr3:75080865-75080504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 23
               

               
Conread position:
               
193-558
               

               
Cow position:
               
chr3:74234291-74233932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 27
               

               
Conread position:
               
194-410
               

               
Cow position:
               
chr3:9117134-9116922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
195-546
               

               
Cow position:
               
chr3:73709155-73708793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
195-548
               

               
Cow position:
               
chr3:71238256-71237899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
196, 20
               

               
Conread position:
               
195-560
               

               
Cow position:
               
chr3:54946234-54945855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
195-560
               

               
Cow position:
               
chr3:74601219-74600847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
195-571
               

               
Cow position:
               
chr3:210422-210040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
195-572
               

               
Cow position:
               
chr3:22676001-22676365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
195-591
               

               
Cow position:
               
chr3:60597645-60597249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr3:59597279-59596936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr3:78077296-78076919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 165
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr3:80581756-80581380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
218, 23
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr3:61224643-61225004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
199-560
               

               
Cow position:
               
chr3:15159130-15158771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
199-566
               

               
Cow position:
               
chr3:2538343-2537978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
199-566
               

               
Cow position:
               
chr3:17331826-17331492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
241, 88
               

               
Conread position:
               
201-410
               

               
Cow position:
               
chr3:32409312-32409104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
203, 19
               

               
Conread position:
               
201-546
               

               
Cow position:
               
chr3:55835719-55836086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
201-569
               

               
Cow position:
               
chr3:55271948-55272320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 14
               

               
Conread position:
               
202-463
               

               
Cow position:
               
chr3:54506807-54506532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
203-410
               

               
Cow position:
               
chr3:54290415-54290621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
203-538
               

               
Cow position:
               
chr3:16752164-16752501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
194, 17
               

               
Conread position:
               
203-547
               

               
Cow position:
               
chr3:56476777-56476425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
205-452
               

               
Cow position:
               
chr3:68616237-68616491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
205-552
               

               
Cow position:
               
chr3:48363165-48362821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
205-560
               

               
Cow position:
               
chr3:525447-525084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr3:70614386-70614588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
206-539
               

               
Cow position:
               
chr3:80740659-80740323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
160, 81
               

               
Conread position:
               
206-546
               

               
Cow position:
               
chr3:13353456-13353101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
206-566
               

               
Cow position:
               
chr3:32585242-32584881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 10
               

               
Conread position:
               
207-511
               

               
Cow position:
               
chr3:11063456-11063157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
205, 9
               

               
Conread position:
               
208-560
               

               
Cow position:
               
chr3:74533445-74533078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
208-579
               

               
Cow position:
               
chr3:67744533-67744918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 134
               

               
Conread position:
               
209-560
               

               
Cow position:
               
chr3:29887327-29887694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
210-556
               

               
Cow position:
               
chr3:23496488-23496822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
211, 15
               

               
Conread position:
               
210-560
               

               
Cow position:
               
chr3:16621943-16622298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
211-436
               

               
Cow position:
               
chr3:74079545-74079772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
212-460
               

               
Cow position:
               
chr3:75107866-75107620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr3:74584295-74584105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
216-560
               

               
Cow position:
               
chr3:5097293-5096933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 12
               

               
Conread position:
               
216-572
               

               
Cow position:
               
chr3:45534209-45534582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
216-577
               

               
Cow position:
               
chr3:17936750-17937127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 166
               

               
Conread position:
               
217-567
               

               
Cow position:
               
chr3:19006743-19006390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
218-560
               

               
Cow position:
               
chr3:79292912-79292564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
205, 10
               

               
Conread position:
               
220-550
               

               
Cow position:
               
chr3:22232572-22232899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 5
               

               
Conread position:
               
220-567
               

               
Cow position:
               
chr3:67704629-67704263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 263
               

               
Conread position:
               
221-387
               

               
Cow position:
               
chr3:10668797-10668962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
221-396
               

               
Cow position:
               
chr3:3883734-3883910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
221-396
               

               
Cow position:
               
chr3:26874672-26874501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
143, 87
               

               
Conread position:
               
221-399
               

               
Cow position:
               
chr3:64196908-64196729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
221-402
               

               
Cow position:
               
chr3:47753308-47753126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr3:55177664-55177856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
221-451
               

               
Cow position:
               
chr3:48072800-48073039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
169, 139
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chr3:76922581-76922841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
135, 109
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr3:20677760-20678020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
171, 67
               

               
Conread position:
               
221-514
               

               
Cow position:
               
chr3:6182145-6182428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
175, 67
               

               
Conread position:
               
221-524
               

               
Cow position:
               
chr3:68156805-68156496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
221-525
               

               
Cow position:
               
chr3:17447533-17447843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
221-533
               

               
Cow position:
               
chr3:53222095-53221771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr3:45647762-45647405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr3:53150413-53150057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr3:53790454-53790814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr3:62826537-62826893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
221-560
               

               
Cow position:
               
chr3:80565048-80564693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 114
               

               
Conread position:
               
221-566
               

               
Cow position:
               
chr3:68881040-68881385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr3:68707931-68708281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
221-571
               

               
Cow position:
               
chr3:56059893-56059525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr3:14552957-14552595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 131
               

               
Conread position:
               
221-573
               

               
Cow position:
               
chr3:26066083-26065717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
221-575
               

               
Cow position:
               
chr3:23408276-23408627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
205, 72
               

               
Conread position:
               
221-577
               

               
Cow position:
               
chr3:75480081-75479724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
221-591
               

               
Cow position:
               
chr3:23168984-23169374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 89
               

               
Conread position:
               
222-434
               

               
Cow position:
               
chr3:15950832-15951039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
222-540
               

               
Cow position:
               
chr3:18686987-18686666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
190, 131
               

               
Conread position:
               
222-541
               

               
Cow position:
               
chr3:18725563-18725885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
174, 118
               

               
Conread position:
               
222-552
               

               
Cow position:
               
chr3:2506398-2506743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr3:26904191-26903845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr3:35852390-35852737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 214
               

               
Conread position:
               
222-566
               

               
Cow position:
               
chr3:30180166-30179806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
222-567
               

               
Cow position:
               
chr3:37485716-37486060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
222-573
               

               
Cow position:
               
chr3:38864207-38863830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 265
               

               
Conread position:
               
223-519
               

               
Cow position:
               
chr3:74754404-74754099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 5
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr3:79148206-79148546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
223-566
               

               
Cow position:
               
chr3:2675108-2674753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
173, 11
               

               
Conread position:
               
223-571
               

               
Cow position:
               
chr3:65058777-65058420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
175, 5
               

               
Conread position:
               
224-392
               

               
Cow position:
               
chr3:478721-478888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
225-406
               

               
Cow position:
               
chr3:18607748-18607562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 175
               

               
Conread position:
               
225-570
               

               
Cow position:
               
chr3:55124204-55124559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
225-572
               

               
Cow position:
               
chr3:63177561-63177231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 190
               

               
Conread position:
               
226-558
               

               
Cow position:
               
chr3:26218974-26219329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 129
               

               
Conread position:
               
226-570
               

               
Cow position:
               
chr3:57764296-57763942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
226-572
               

               
Cow position:
               
chr3:70401973-70401620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
226-591
               

               
Cow position:
               
chr3:72676168-72675783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
165, 138
               

               
Conread position:
               
228-356
               

               
Cow position:
               
chr3:82629391-82629263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-393
               

               
Cow position:
               
chr3:31350029-31350194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-396
               

               
Cow position:
               
chr3:3472115-3471946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 103
               

               
Conread position:
               
228-396
               

               
Cow position:
               
chr3:75608573-75608405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr3:55109538-55109721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr3:3316741-3316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
228-421
               

               
Cow position:
               
chr3:44330362-44330556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
228-483
               

               
Cow position:
               
chr3:30940881-30940623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
228-538
               

               
Cow position:
               
chr3:58767338-58767031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 171
               

               
Conread position:
               
228-546
               

               
Cow position:
               
chr3:52652005-52652331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
228-551
               

               
Cow position:
               
chr3:51234021-51234357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
228-558
               

               
Cow position:
               
chr3:3985397-3985062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr3:4461409-4461759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
113, 234
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr3:5374403-5374065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
171, 55
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr3:9641643-9641294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 273
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr3:38347265-38346931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
166, 61
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr3:53046588-53046927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
228-560
               

               
Cow position:
               
chr3:77365215-77365564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 242
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr3:2392893-2393243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr3:83815713-83816069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 37
               

               
Conread position:
               
228-567
               

               
Cow position:
               
chr3:57624539-57624186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
169, 125
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr3:64172515-64172165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr3:80053468-80053814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
228-569
               

               
Cow position:
               
chr3:82019764-82020128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
228-570
               

               
Cow position:
               
chr3:83455077-83455431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr3:49328019-49327662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 320
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr3:81371724-81371374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
228-572
               

               
Cow position:
               
chr3:45881973-45881626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 127
               

               
Conread position:
               
228-572
               

               
Cow position:
               
chr3:50069838-50069497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
187, 91
               

               
Conread position:
               
228-572
               

               
Cow position:
               
chr3:80973427-80973070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
228-577
               

               
Cow position:
               
chr3:54739812-54740159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
228-577
               

               
Cow position:
               
chr3:58968828-58969182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 131
               

               
Conread position:
               
228-577
               

               
Cow position:
               
chr3:65413203-65413563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
161, 246
               

               
Conread position:
               
228-582
               

               
Cow position:
               
chr3:73764125-73764485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
165, 53
               

               
Conread position:
               
228-591
               

               
Cow position:
               
chr3:5100697-5101064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
157, 121
               

               
Conread position:
               
229-541
               

               
Cow position:
               
chr3:26970887-26970574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
161, 106
               

               
Conread position:
               
229-559
               

               
Cow position:
               
chr3:53739111-53739460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
137, 124
               

               
Conread position:
               
229-569
               

               
Cow position:
               
chr3:66292102-66292458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
138, 257
               

               
Conread position:
               
230-549
               

               
Cow position:
               
chr3:22221400-22221093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
193, 66
               

               
Conread position:
               
230-558
               

               
Cow position:
               
chr3:2396716-2397051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 58
               

               
Conread position:
               
230-572
               

               
Cow position:
               
chr3:75711379-75711036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
144, 272
               

               
Conread position:
               
231-560
               

               
Cow position:
               
chr3:70896120-70895776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
233-557
               

               
Cow position:
               
chr3:69750641-69750968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
235-393
               

               
Cow position:
               
chr3:64135786-64135626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
235-547
               

               
Cow position:
               
chr3:7331060-7331374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
235-560
               

               
Cow position:
               
chr3:59799316-59798984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
177, 123
               

               
Conread position:
               
240-396
               

               
Cow position:
               
chr3:12670552-12670707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr3:54340360-54340686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
241-560
               

               
Cow position:
               
chr3:71497076-71497416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
113, 233
               

               
Conread position:
               
241-569
               

               
Cow position:
               
chr3:19711278-19711595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
212, 30
               

               
Conread position:
               
242-572
               

               
Cow position:
               
chr3:78443509-78443845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
245-560
               

               
Cow position:
               
chr3:66609786-66610108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
247-532
               

               
Cow position:
               
chr3:9074290-9074564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
247-560
               

               
Cow position:
               
chr3:73759461-73759789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
255-560
               

               
Cow position:
               
chr3:26493183-26493494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
255-575
               

               
Cow position:
               
chr3:51578273-51578605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
257-407
               

               
Cow position:
               
chr3:46541783-46541930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
257-552
               

               
Cow position:
               
chr3:18393348-18393646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
257-558
               

               
Cow position:
               
chr3:69416735-69417056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr3:18459482-18459790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr3:70899937-70899630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
257-567
               

               
Cow position:
               
chr3:28908157-28908472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
180, 112
               

               
Conread position:
               
257-571
               

               
Cow position:
               
chr3:64010766-64011097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 216
               

               
Conread position:
               
257-572
               

               
Cow position:
               
chr3:26920954-26920614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
257-572
               

               
Cow position:
               
chr3:54435022-54434691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
257-577
               

               
Cow position:
               
chr3:77271232-77271556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
258-399
               

               
Cow position:
               
chr3:19162656-19162517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
258-415
               

               
Cow position:
               
chr3:60264671-60264828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 109
               

               
Conread position:
               
258-513
               

               
Cow position:
               
chr3:56301313-56301571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
258-538
               

               
Cow position:
               
chr3:43233551-43233255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
258-541
               

               
Cow position:
               
chr3:5044768-5045061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
258-542
               

               
Cow position:
               
chr3:15684877-15685170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 5
               

               
Conread position:
               
258-547
               

               
Cow position:
               
chr3:74088135-74088431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
258-553
               

               
Cow position:
               
chr3:29507627-29507333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
258-555
               

               
Cow position:
               
chr3:54903609-54903304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
258-555
               

               
Cow position:
               
chr3:57577742-57577430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
258-557
               

               
Cow position:
               
chr3:48241659-48241354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
258-557
               

               
Cow position:
               
chr3:80818762-80818462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
258-558
               

               
Cow position:
               
chr3:45648175-45647871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
258-559
               

               
Cow position:
               
chr3:7786648-7786950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
258-559
               

               
Cow position:
               
chr3:53588339-53588659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 5
               

               
Conread position:
               
258-559
               

               
Cow position:
               
chr3:58131040-58130731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 5
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:17456223-17456539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 113
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:20663504-20663808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:30463127-30463436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:31309309-31309625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 231
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:39066377-39066063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:56582893-56582573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 245
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:59000712-59001015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
258-560
               

               
Cow position:
               
chr3:74611608-74611292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
84, 5
               

               
Conread position:
               
258-561
               

               
Cow position:
               
chr3:25690838-25690514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
258-566
               

               
Cow position:
               
chr3:31225477-31225172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr3:28898178-28898499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
258-568
               

               
Cow position:
               
chr3:56125777-56125469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
258-569
               

               
Cow position:
               
chr3:2518494-2518817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 137
               

               
Conread position:
               
258-569
               

               
Cow position:
               
chr3:53270875-53270546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 106
               

               
Conread position:
               
258-572
               

               
Cow position:
               
chr3:15057575-15057881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
258-572
               

               
Cow position:
               
chr3:37041464-37041146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
258-577
               

               
Cow position:
               
chr3:23471414-23471756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
258-577
               

               
Cow position:
               
chr3:50763166-50762837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
258-582
               

               
Cow position:
               
chr3:15388264-15387919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
259-560
               

               
Cow position:
               
chr3:10347395-10347084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
259-560
               

               
Cow position:
               
chr3:65800629-65800325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
260-547
               

               
Cow position:
               
chr3:22820614-22820312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
260-556
               

               
Cow position:
               
chr3:71430161-71430478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
261-535
               

               
Cow position:
               
chr3:30055415-30055691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 210
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr3:17694963-17695275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr3:29596432-29596124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
261-559
               

               
Cow position:
               
chr3:60933459-60933146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 219
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:1830534-1830833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:4457029-4457346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:18855117-18854823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
165, 103
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:18887610-18887309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:20129977-20129671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:31055971-31056272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
129, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:48851928-48852236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:49650430-49650110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 303
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:51012511-51012803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:53113217-53112898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:53592647-53592970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 301
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:61539843-61539526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:67929218-67929536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:72777280-72776970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:73961655-73961949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
261-560
               

               
Cow position:
               
chr3:79902538-79902233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 211
               

               
Conread position:
               
261-562
               

               
Cow position:
               
chr3:13301808-13302128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
135, 107
               

               
Conread position:
               
261-564
               

               
Cow position:
               
chr3:30008866-30009185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
261-566
               

               
Cow position:
               
chr3:53572710-53573026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 114
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr3:2216410-2216080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
98, 304
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr3:31298121-31298440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr3:53384238-53384563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 255
               

               
Conread position:
               
261-571
               

               
Cow position:
               
chr3:37599386-37599698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr3:24548795-24549115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
93, 205
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr3:33252847-33253165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr3:79591849-79592172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr3:83441849-83442162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
261-577
               

               
Cow position:
               
chr3:17957509-17957179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
135, 223
               

               
Conread position:
               
261-577
               

               
Cow position:
               
chr3:54049989-54050307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
262-486
               

               
Cow position:
               
chr3:77981275-77981501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
262-560
               

               
Cow position:
               
chr3:7763696-7763393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
262-591
               

               
Cow position:
               
chr3:14801785-14801452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 92
               

               
Conread position:
               
263-518
               

               
Cow position:
               
chr3:32151996-32152247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
263-541
               

               
Cow position:
               
chr3:18216725-18217016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
263-555
               

               
Cow position:
               
chr3:57754436-57754749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
263-555
               

               
Cow position:
               
chr3:68262805-68262515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
263-555
               

               
Cow position:
               
chr3:72391122-72390816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 92
               

               
Conread position:
               
263-559
               

               
Cow position:
               
chr3:63203475-63203176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr3:7566377-7566689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 215
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr3:16547706-16547406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr3:49460886-49461207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
263-560
               

               
Cow position:
               
chr3:55970547-55970237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 212
               

               
Conread position:
               
263-566
               

               
Cow position:
               
chr3:18498056-18497749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 212
               

               
Conread position:
               
263-566
               

               
Cow position:
               
chr3:74699342-74699671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 279
               

               
Conread position:
               
263-569
               

               
Cow position:
               
chr3:45279506-45279179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
263-577
               

               
Cow position:
               
chr3:15954045-15954367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
264-560
               

               
Cow position:
               
chr3:24823990-24823704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
265-560
               

               
Cow position:
               
chr3:52721971-52722267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
266-560
               

               
Cow position:
               
chr3:58285870-58286168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
276-520
               

               
Cow position:
               
chr3:58959660-58959427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
276-577
               

               
Cow position:
               
chr3:63179884-63179580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
276-586
               

               
Cow position:
               
chr3:60892652-60892337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
277-511
               

               
Cow position:
               
chr3:22907702-22907938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
278-560
               

               
Cow position:
               
chr3:76172644-76172932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
278-560
               

               
Cow position:
               
chr3:81277673-81277974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
278-569
               

               
Cow position:
               
chr3:75057109-75057394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
281-560
               

               
Cow position:
               
chr3:59392096-59392377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
282-511
               

               
Cow position:
               
chr3:16656474-16656702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
284-560
               

               
Cow position:
               
chr3:12287251-12286965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
287-569
               

               
Cow position:
               
chr3:42178172-42177880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
288-560
               

               
Cow position:
               
chr3:68291572-68291296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 84
               

               
Conread position:
               
288-571
               

               
Cow position:
               
chr3:74409502-74409213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 208
               

               
Conread position:
               
289-560
               

               
Cow position:
               
chr3:49793411-49793145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 191
               

               
Conread position:
               
290-555
               

               
Cow position:
               
chr3:62998994-62999270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
290-559
               

               
Cow position:
               
chr3:16343610-16343347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
290-567
               

               
Cow position:
               
chr3:43528223-43528514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
290-571
               

               
Cow position:
               
chr3:5416207-5416513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
291-539
               

               
Cow position:
               
chr3:23416876-23417117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
291-567
               

               
Cow position:
               
chr3:5850917-5851204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 207
               

               
Conread position:
               
293-560
               

               
Cow position:
               
chr3:23478237-23477965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
294-541
               

               
Cow position:
               
chr3:25755033-25754785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
298-558
               

               
Cow position:
               
chr3:51146661-51146934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
298-560
               

               
Cow position:
               
chr3:48269870-48269593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr3:17450935-17451203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
299-560
               

               
Cow position:
               
chr3:53538523-53538253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
305-564
               

               
Cow position:
               
chr3:41947139-41947396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
312-460
               

               
Cow position:
               
chr3:27670242-27670096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
313-569
               

               
Cow position:
               
chr3:57553858-57554127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 195
               

               
Conread position:
               
314-560
               

               
Cow position:
               
chr3:19789125-19789389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
315-574
               

               
Cow position:
               
chr3:30701298-30701037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
316-572
               

               
Cow position:
               
chr3:51813527-51813776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
245, 56
               

               
Conread position:
               
316-577
               

               
Cow position:
               
chr3:45744689-45744425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
318-560
               

               
Cow position:
               
chr3:2903308-2903560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr3:23945078-23944827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
328-560
               

               
Cow position:
               
chr3:19198647-19198411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
330-560
               

               
Cow position:
               
chr3:76411094-76411319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
331-555
               

               
Cow position:
               
chr3:13118314-13118080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
344-560
               

               
Cow position:
               
chr3:70467865-70468073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
86, 107
               

               
Conread position:
               
349-560
               

               
Cow position:
               
chr3:22021019-22021243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
356-560
               

               
Cow position:
               
chr3:16885944-16886149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 190
               

               
Conread position:
               
359-571
               

               
Cow position:
               
chr3:33632946-33633168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
359-572
               

               
Cow position:
               
chr3:42914388-42914170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
360-555
               

               
Cow position:
               
chr3:44254495-44254693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 188
               

               
Conread position:
               
360-560
               

               
Cow position:
               
chr3:8753403-8753194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 193
               

               
Conread position:
               
361-559
               

               
Cow position:
               
chr3:15080802-15081008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
361-572
               

               
Cow position:
               
chr3:3096422-3096630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
362-572
               

               
Cow position:
               
chr3:82618317-82618108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
366-560
               

               
Cow position:
               
chr3:15557892-15557698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
374-569
               

               
Cow position:
               
chr3:27553470-27553271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
374-569
               

               
Cow position:
               
chr3:40231846-40231649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
382-560
               

               
Cow position:
               
chr3:59208716-59208544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
382-567
               

               
Cow position:
               
chr3:9843489-9843307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
382-572
               

               
Cow position:
               
chr3:16004088-16004269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 9
               

               
Conread position:
               
382-572
               

               
Cow position:
               
chr3:25691656-25691466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
382-577
               

               
Cow position:
               
chr3:54862513-54862712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
382-592
               

               
Cow position:
               
chr3:4031872-4031665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
180, 9
               

               
Conread position:
               
382-600
               

               
Cow position:
               
chr3:42594751-42594965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
383-572
               

               
Cow position:
               
chr3:66885130-66885321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
384-560
               

               
Cow position:
               
chr3:55460595-55460771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
384-560
               

               
Cow position:
               
chr3:61278809-61278636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
384-560
               

               
Cow position:
               
chr3:84153228-84153055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
384-562
               

               
Cow position:
               
chr3:12323968-12323793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
384-566
               

               
Cow position:
               
chr3:24276610-24276431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
384-567
               

               
Cow position:
               
chr3:53222739-53222919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
384-587
               

               
Cow position:
               
chr3:1498779-1498574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr3:9116803-9116637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr3:48811085-48811255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr3:37982233-37982403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
399-560
               

               
Cow position:
               
chr3:43007509-43007675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
405-560
               

               
Cow position:
               
chr3:56102321-56102168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
405-567
               

               
Cow position:
               
chr3:72168836-72168998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
405-572
               

               
Cow position:
               
chr3:21341081-21341246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
406-560
               

               
Cow position:
               
chr3:48900622-48900772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
406-577
               

               
Cow position:
               
chr3:33327584-33327419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
407-505
               

               
Cow position:
               
chr3:5082759-5082857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-554
               

               
Cow position:
               
chr3:78546215-78546361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
407-558
               

               
Cow position:
               
chr3:48371014-48370863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-560
               

               
Cow position:
               
chr3:4332247-4332093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
407-566
               

               
Cow position:
               
chr3:54960069-54959915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
407-579
               

               
Cow position:
               
chr3:42489428-42489598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 59
               

               
Conread position:
               
408-504
               

               
Cow position:
               
chr3:15153522-15153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
408-523
               

               
Cow position:
               
chr3:55106559-55106676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
408-528
               

               
Cow position:
               
chr3:4861567-4861451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
408-530
               

               
Cow position:
               
chr3:83201646-83201768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-534
               

               
Cow position:
               
chr3:35074561-35074437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
408-538
               

               
Cow position:
               
chr3:14717689-14717557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-538
               

               
Cow position:
               
chr3:26894539-26894413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
408-548
               

               
Cow position:
               
chr3:58158585-58158725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-554
               

               
Cow position:
               
chr3:8901297-8901157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
408-554
               

               
Cow position:
               
chr3:73590121-73590262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr3:55971104-55970960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr3:56523625-56523766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
408-555
               

               
Cow position:
               
chr3:61467487-61467340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-556
               

               
Cow position:
               
chr3:49455116-49454969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
408-557
               

               
Cow position:
               
chr3:46901075-46900928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
408-558
               

               
Cow position:
               
chr3:17952534-17952388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr3:8717130-8716978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
408-559
               

               
Cow position:
               
chr3:48923633-48923782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:6873366-6873515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:8556907-8557051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:11019999-11019848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:13899568-13899723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:18607251-18607098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:24639471-24639320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:34392219-34392366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:58951499-58951351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:61857381-61857226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:63861013-63861171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:68583124-68583272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:73467502-73467349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:77496699-77496547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:78201149-78200997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:79208118-79208273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:79905040-79905182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:83921081-83920928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-560
               

               
Cow position:
               
chr3:84000491-84000342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
408-564
               

               
Cow position:
               
chr3:5899699-5899551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
408-564
               

               
Cow position:
               
chr3:79112496-79112654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr3:2025064-2024907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr3:22907953-22908110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr3:29813122-29812967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
408-566
               

               
Cow position:
               
chr3:65020214-65020058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr3:31501229-31501076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr3:33693528-33693372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
408-567
               

               
Cow position:
               
chr3:61262681-61262526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
408-569
               

               
Cow position:
               
chr3:39171605-39171764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
408-569
               

               
Cow position:
               
chr3:53909994-53909834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
408-570
               

               
Cow position:
               
chr3:14263272-14263111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
408-570
               

               
Cow position:
               
chr3:35283216-35283377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr3:11333432-11333600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr3:42483779-42483619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr3:51609699-51609534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr3:61678572-61678409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr3:64281054-64281218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
408-571
               

               
Cow position:
               
chr3:66375196-66375039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr3:29807343-29807179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr3:41367108-41367266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr3:49119148-49119315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr3:58383846-58383685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
154, 73
               

               
Conread position:
               
408-572
               

               
Cow position:
               
chr3:83369197-83369039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
408-577
               

               
Cow position:
               
chr3:27286110-27285937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-582
               

               
Cow position:
               
chr3:56704666-56704830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
408-583
               

               
Cow position:
               
chr3:364334-364513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
408-591
               

               
Cow position:
               
chr3:11640310-11640130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
409-548
               

               
Cow position:
               
chr3:8604137-8604272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
409-555
               

               
Cow position:
               
chr3:13577310-13577449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
409-555
               

               
Cow position:
               
chr3:49230894-49230746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
409-558
               

               
Cow position:
               
chr3:42423456-42423599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
409-558
               

               
Cow position:
               
chr3:68648042-68647892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr3:72291-72145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr3:8393228-8393076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr3:23876872-23876728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr3:45333721-45333870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr3:59366431-59366277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
409-560
               

               
Cow position:
               
chr3:77227199-77227048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
409-567
               

               
Cow position:
               
chr3:27532781-27532939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
409-572
               

               
Cow position:
               
chr3:40827736-40827571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
409-575
               

               
Cow position:
               
chr3:81401428-81401588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
409-577
               

               
Cow position:
               
chr3:58540651-58540818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
409-585
               

               
Cow position:
               
chr3:52650654-52650823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr3:48566784-48566937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
410-560
               

               
Cow position:
               
chr3:81940132-81939981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
410-571
               

               
Cow position:
               
chr3:31907266-31907430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
410-571
               

               
Cow position:
               
chr3:67161818-67161650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
410-572
               

               
Cow position:
               
chr3:14725178-14725014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
410-572
               

               
Cow position:
               
chr3:80202485-80202324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
411-569
               

               
Cow position:
               
chr3:36656894-36657050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
412-560
               

               
Cow position:
               
chr3:51033221-51033075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
412-569
               

               
Cow position:
               
chr3:75158233-75158085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
413-559
               

               
Cow position:
               
chr3:82473930-82473783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
413-560
               

               
Cow position:
               
chr3:17284713-17284566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
413-560
               

               
Cow position:
               
chr3:31276225-31276374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
413-566
               

               
Cow position:
               
chr3:44861431-44861584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
413-569
               

               
Cow position:
               
chr3:75143159-75143312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
413-577
               

               
Cow position:
               
chr3:36174197-36174362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
413-580
               

               
Cow position:
               
chr3:51255660-51255491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
414-571
               

               
Cow position:
               
chr3:1300102-1299953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
419-549
               

               
Cow position:
               
chr3:37580447-37580577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
419-560
               

               
Cow position:
               
chr3:79884620-79884756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
419-572
               

               
Cow position:
               
chr3:46350530-46350373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
421-548
               

               
Cow position:
               
chr3:5536041-5536168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chr3:34316095-34316234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-566
               

               
Cow position:
               
chr3:59179274-59179130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
422-560
               

               
Cow position:
               
chr3:53904050-53903916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
423-572
               

               
Cow position:
               
chr3:28597002-28597152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
424-538
               

               
Cow position:
               
chr3:49787272-49787158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-549
               

               
Cow position:
               
chr3:45307800-45307675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-552
               

               
Cow position:
               
chr3:74621132-74621259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:6403158-6403027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:33698587-33698451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:36672137-36672275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:48530499-48530367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:50329213-50329345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:66900880-66901012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:66978705-66978573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
424-560
               

               
Cow position:
               
chr3:75164049-75164180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
424-567
               

               
Cow position:
               
chr3:15661841-15661978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
424-567
               

               
Cow position:
               
chr3:47284697-47284561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
424-567
               

               
Cow position:
               
chr3:74500090-74499947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
424-569
               

               
Cow position:
               
chr3:40100809-40100954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 131
               

               
Conread position:
               
424-570
               

               
Cow position:
               
chr3:16809925-16810072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
424-571
               

               
Cow position:
               
chr3:52147814-52147960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
424-572
               

               
Cow position:
               
chr3:46160983-46161128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
424-572
               

               
Cow position:
               
chr3:65236885-65236742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
424-577
               

               
Cow position:
               
chr3:202569-202722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 110
               

               
Conread position:
               
424-577
               

               
Cow position:
               
chr3:470560-470714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 71
               

               
Conread position:
               
424-577
               

               
Cow position:
               
chr3:22872190-22872340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
425-538
               

               
Cow position:
               
chr3:63332675-63332562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
425-560
               

               
Cow position:
               
chr3:55117107-55117242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-558
               

               
Cow position:
               
chr3:20802770-20802897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr3:66738637-66738503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr3:83988340-83988211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
428-560
               

               
Cow position:
               
chr3:9638736-9638863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
428-575
               

               
Cow position:
               
chr3:42588208-42588064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
429-560
               

               
Cow position:
               
chr3:55085326-55085454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
430-560
               

               
Cow position:
               
chr3:76092144-76092016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
430-571
               

               
Cow position:
               
chr3:42671178-42671039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
431-560
               

               
Cow position:
               
chr3:13350771-13350641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
431-567
               

               
Cow position:
               
chr3:21081527-21081662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
431-567
               

               
Cow position:
               
chr3:81471246-81471377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
431-572
               

               
Cow position:
               
chr3:69144401-69144542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
432-569
               

               
Cow position:
               
chr3:2335140-2335004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
439-548
               

               
Cow position:
               
chr3:53508228-53508119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
440-560
               

               
Cow position:
               
chr3:3884175-3884296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
440-560
               

               
Cow position:
               
chr3:59040292-59040173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
447-559
               

               
Cow position:
               
chr3:79094227-79094339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
460-571
               

               
Cow position:
               
chr3:57022404-57022293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
530-898
               

               
Cow position:
               
chr3:29328438-29328817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
535-898
               

               
Cow position:
               
chr3:36171099-36171457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
545-839
               

               
Cow position:
               
chr3:45692206-45692486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
559-898
               

               
Cow position:
               
chr3:47696609-47696271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:24443288-24443629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:40005087-40005424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:47078808-47079148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:49453803-49453466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:49998944-49998603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:50204351-50204012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:56337148-56337486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:56485454-56485795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
560-898
               

               
Cow position:
               
chr3:83767059-83766718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
561-815
               

               
Cow position:
               
chr3:38769607-38769356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
561-825
               

               
Cow position:
               
chr3:11182146-11182404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
561-840
               

               
Cow position:
               
chr3:77622604-77622334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr3:24638212-24637877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
561-897
               

               
Cow position:
               
chr3:56153108-56152779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 6
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr3:57977716-57978059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr3:62882163-62881831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr3:67627958-67628291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr3:68717904-68718241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
561-898
               

               
Cow position:
               
chr3:75039038-75039380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
561-900
               

               
Cow position:
               
chr3:64427446-64427773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
561-900
               

               
Cow position:
               
chr3:66044121-66044453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
562-900
               

               
Cow position:
               
chr3:13466554-13466877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
563-896
               

               
Cow position:
               
chr3:48525545-48525214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr3:3653481-3653816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr3:38528963-38529296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
563-898
               

               
Cow position:
               
chr3:59332261-59331923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
563-900
               

               
Cow position:
               
chr3:29581464-29581129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
564-813
               

               
Cow position:
               
chr3:76001153-76001398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-825
               

               
Cow position:
               
chr3:53880465-53880724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-825
               

               
Cow position:
               
chr3:65177812-65177553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
564-884
               

               
Cow position:
               
chr3:59864357-59864034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-893
               

               
Cow position:
               
chr3:66888394-66888726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
564-895
               

               
Cow position:
               
chr3:31021485-31021151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-896
               

               
Cow position:
               
chr3:43190468-43190803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-897
               

               
Cow position:
               
chr3:600269-599952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
209, 61
               

               
Conread position:
               
564-897
               

               
Cow position:
               
chr3:6713811-6713475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:7246302-7246638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:12664735-12664398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:15416268-15415931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:19798350-19798687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:19883272-19882941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:20379915-20380249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:21026601-21026937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 182
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:27921250-27920913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:30616135-30616472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:34015144-34014807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:35611956-35611619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:37971846-37971517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:38496577-38496243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:39555782-39556115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:40337341-40337678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:41082965-41082632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:41207795-41208130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:46858481-46858819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:48845808-48845471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:49563812-49563475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:49611406-49611743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:66969077-66969414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:68889770-68890106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
564-898
               

               
Cow position:
               
chr3:69963008-69963336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
576-898
               

               
Cow position:
               
chr3:18759626-18759955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
577-857
               

               
Cow position:
               
chr3:7327225-7326948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
577-888
               

               
Cow position:
               
chr3:72106019-72106323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
577-897
               

               
Cow position:
               
chr3:14862993-14862672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
577-897
               

               
Cow position:
               
chr3:26533205-26533522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
246, 48
               

               
Conread position:
               
577-897
               

               
Cow position:
               
chr3:32620252-32620575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:2921035-2920712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:15656498-15656811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:16225670-16225346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:18862230-18861908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:68697176-68697502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:74060263-74059942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
577-898
               

               
Cow position:
               
chr3:82363425-82363100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
578-897
               

               
Cow position:
               
chr3:22084627-22084944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 47
               

               
Conread position:
               
580-898
               

               
Cow position:
               
chr3:596906-596586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
581-900
               

               
Cow position:
               
chr3:19768218-19767899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
582-877
               

               
Cow position:
               
chr3:19718758-19719049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
582-883
               

               
Cow position:
               
chr3:36614474-36614778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-889
               

               
Cow position:
               
chr3:82931419-82931109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
582-891
               

               
Cow position:
               
chr3:13276493-13276804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr3:26743087-26743404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-896
               

               
Cow position:
               
chr3:72632854-72632536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-897
               

               
Cow position:
               
chr3:7477137-7477456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:2708085-2708405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:8243366-8243055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:13036474-13036155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:18814290-18813972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:24264986-24264667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:24573374-24573694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:30321046-30320729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:32412905-32413224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:33460044-33459725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:34458082-34458401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:35619370-35619051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:38869358-38869046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:45977286-45976967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:46752405-46752093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:49335985-49335669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:52689541-52689238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
256, 16
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:53047999-53048314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:56912638-56912328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
582-898
               

               
Cow position:
               
chr3:78024646-78024967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
582-899
               

               
Cow position:
               
chr3:11510060-11510374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
583-898
               

               
Cow position:
               
chr3:49908233-49908547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
583-898
               

               
Cow position:
               
chr3:69931051-69931368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
584-898
               

               
Cow position:
               
chr3:23287553-23287870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
587-897
               

               
Cow position:
               
chr3:48240035-48239724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
592-898
               

               
Cow position:
               
chr3:6688588-6688279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
600-898
               

               
Cow position:
               
chr3:18112921-18113220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
600-898
               

               
Cow position:
               
chr3:26298250-26298551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
608-897
               

               
Cow position:
               
chr3:69421706-69421989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
611-830
               

               
Cow position:
               
chr3:31418282-31418071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
162, 26
               

               
Conread position:
               
613-898
               

               
Cow position:
               
chr3:79592891-79592605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
630-897
               

               
Cow position:
               
chr3:24356323-24356062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
637-900
               

               
Cow position:
               
chr3:33636136-33635873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
638-784
               

               
Cow position:
               
chr3:27245962-27246107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-840
               

               
Cow position:
               
chr3:12253773-12253578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
135, 44
               

               
Conread position:
               
638-887
               

               
Cow position:
               
chr3:64135079-64134830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
201, 45
               

               
Conread position:
               
638-897
               

               
Cow position:
               
chr3:3525753-3525494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-897
               

               
Cow position:
               
chr3:27783556-27783822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
204, 40
               

               
Conread position:
               
638-897
               

               
Cow position:
               
chr3:47690768-47690512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
638-897
               

               
Cow position:
               
chr3:63277907-63278167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:6785134-6784873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:21004540-21004281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:24347917-24347659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:34504622-34504882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:58036253-58035993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:63000636-63000895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:63256836-63256577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
638-898
               

               
Cow position:
               
chr3:64653392-64653132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
643-894
               

               
Cow position:
               
chr3:8452850-8453085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
643-896
               

               
Cow position:
               
chr3:73304221-73303972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
197, 39
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr3:8242336-8242083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr3:22948734-22948985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr3:36000258-36000014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr3:32326702-32326962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr3:44926541-44926287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr3:61250079-61249827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr3:63689526-63689780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr3:72669835-72670090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
643-898
               

               
Cow position:
               
chr3:77062251-77062507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
197, 7
               

               
Conread position:
               
643-900
               

               
Cow position:
               
chr3:31321059-31320805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
644-897
               

               
Cow position:
               
chr3:65206175-65206419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
644-900
               

               
Cow position:
               
chr3:43345520-43345775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
646-900
               

               
Cow position:
               
chr3:17057352-17057606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
196, 35
               

               
Conread position:
               
651-897
               

               
Cow position:
               
chr3:57742239-57741992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
652-898
               

               
Cow position:
               
chr3:944392-944144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
658-898
               

               
Cow position:
               
chr3:58027458-58027689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
659-898
               

               
Cow position:
               
chr3:71139917-71140152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
175, 24
               

               
Conread position:
               
660-897
               

               
Cow position:
               
chr3:29574417-29574654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
667-897
               

               
Cow position:
               
chr3:49561024-49561247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
672-898
               

               
Cow position:
               
chr3:6382929-6382702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
690-898
               

               
Cow position:
               
chr3:79430010-79430220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
695-898
               

               
Cow position:
               
chr3:2852790-2852990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
706-891
               

               
Cow position:
               
chr3:57592496-57592316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
707-898
               

               
Cow position:
               
chr3:38492111-38491918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
712-900
               

               
Cow position:
               
chr3:44670190-44670378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr3:32491970-32491783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
713-898
               

               
Cow position:
               
chr3:58128723-58128541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
718-898
               

               
Cow position:
               
chr3:80306133-80305955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
733-900
               

               
Cow position:
               
chr3:68128608-68128773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
749-899
               

               
Cow position:
               
chr3:34876058-34875911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 46
               
Show alignments to all cow chromosomes.