Cow genome map

Conread name: Ss1.1-rcbl0_002410.5.5

Conread position: 85-566
Cow position: chrX:9416408-9416919 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 332
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 123, 248

Conread position: 86-336
Cow position: chrX:34508818-34508562 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 28, 83

Conread position: 87-393
Cow position: chrX:6599527-6599822 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 8

Conread position: 89-572
Cow position: chrX:152161-151668 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 325
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 20

Conread position: 92-483
Cow position: chrX:615996-616409 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 92-549
Cow position: chrX:40480603-40481081 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 312
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 127

Conread position: 95-522
Cow position: chrX:32821281-32820847 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 80

Conread position: 95-560
Cow position: chrX:878111-878591 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 382

Conread position: 95-566
Cow position: chrX:30337714-30338152 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 312
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 80

Conread position: 96-395
Cow position: chrX:40531787-40532084 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 127

Conread position: 98-346
Cow position: chrX:27668712-27668950 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 99-558
Cow position: chrX:5872568-5872095 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 25

Conread position: 99-560
Cow position: chrX:7695998-7695541 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 322
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 290, 121

Conread position: 100-548
Cow position: chrX:38853447-38852988 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 76

Conread position: 100-569
Cow position: chrX:38071519-38072001 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 288
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 17

Conread position: 103-488
Cow position: chrX:5118252-5118654 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 196, 11

Conread position: 104-359
Cow position: chrX:2936201-2935952 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 31

Conread position: 104-560
Cow position: chrX:40557424-40557896 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 118

Conread position: 105-560
Cow position: chrX:27393788-27394234 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 302
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 284, 18

Conread position: 109-530
Cow position: chrX:31312282-31311835 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 109-579
Cow position: chrX:7513740-7513276 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 189

Conread position: 110-569
Cow position: chrX:31373780-31373344 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 308
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 65

Conread position: 111-560
Cow position: chrX:40269732-40269256 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 48

Conread position: 142-569
Cow position: chrX:13382534-13382095 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 299
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 37, 91

Conread position: 144-567
Cow position: chrX:6690050-6690475 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 66

Conread position: 174-560
Cow position: chrX:8797430-8797028 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 130

Conread position: 174-577
Cow position: chrX:41884231-41884656 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 177-560
Cow position: chrX:27771796-27772176 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 182, 38

Conread position: 178-560
Cow position: chrX:33640146-33639751 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 188, 42

Conread position: 179-560
Cow position: chrX:17726146-17725758 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 41

Conread position: 180-528
Cow position: chrX:42235350-42235722 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 162, 311

Conread position: 180-567
Cow position: chrX:37072562-37072179 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 36

Conread position: 182-547
Cow position: chrX:35273534-35273144 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 27

Conread position: 182-560
Cow position: chrX:32310274-32309886 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 11

Conread position: 183-560
Cow position: chrX:22822216-22821827 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 251
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 52

Conread position: 184-567
Cow position: chrX:32623735-32623356 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 31

Conread position: 187-409
Cow position: chrX:35985979-35985764 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 170, 33

Conread position: 187-572
Cow position: chrX:41878772-41879164 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 271
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 161, 29

Conread position: 187-577
Cow position: chrX:33493939-33493537 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 28

Conread position: 189-427
Cow position: chrX:20957398-20957176 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 189-524
Cow position: chrX:36068179-36067835 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 175, 27

Conread position: 189-560
Cow position: chrX:4632695-4633071 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 37

Conread position: 190-506
Cow position: chrX:4278956-4279281 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 206, 51

Conread position: 191-511
Cow position: chrX:4399277-4398954 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 123, 35

Conread position: 191-560
Cow position: chrX:11656239-11655866 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 29

Conread position: 191-560
Cow position: chrX:13647627-13648004 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 25

Conread position: 191-569
Cow position: chrX:45502308-45501918 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 14

Conread position: 193-410
Cow position: chrX:29050404-29050192 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 162, 32

Conread position: 193-532
Cow position: chrX:8869245-8869601 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 23

Conread position: 193-559
Cow position: chrX:6414197-6413827 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 202, 23

Conread position: 193-560
Cow position: chrX:22482530-22482909 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 96

Conread position: 193-571
Cow position: chrX:37780952-37781341 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 22

Conread position: 195-410
Cow position: chrX:9252004-9252217 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 145, 0

Conread position: 195-505
Cow position: chrX:14275589-14275901 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 158, 25

Conread position: 195-566
Cow position: chrX:31436628-31436254 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 19

Conread position: 197-560
Cow position: chrX:1466319-1465967 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 228

Conread position: 198-560
Cow position: chrX:13191405-13191764 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 58, 17

Conread position: 199-560
Cow position: chrX:23092023-23091661 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 26

Conread position: 200-560
Cow position: chrX:6659498-6659153 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 144, 16

Conread position: 203-397
Cow position: chrX:19394704-19394510 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 203-408
Cow position: chrX:4152885-4153088 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 146, 17

Conread position: 203-560
Cow position: chrX:43115296-43114951 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 161, 12

Conread position: 205-560
Cow position: chrX:30420803-30421159 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 38

Conread position: 206-424
Cow position: chrX:45977069-45976853 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 151, 20

Conread position: 206-560
Cow position: chrX:38006628-38006988 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 24

Conread position: 206-567
Cow position: chrX:11082474-11082840 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 164, 285

Conread position: 206-591
Cow position: chrX:15815229-15814845 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 243
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 205, 9

Conread position: 208-483
Cow position: chrX:38066309-38066597 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 176

Conread position: 209-560
Cow position: chrX:11938790-11939144 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 13

Conread position: 209-560
Cow position: chrX:17042823-17042470 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 8

Conread position: 210-547
Cow position: chrX:4825692-4826035 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 65

Conread position: 210-560
Cow position: chrX:42469798-42470157 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 18

Conread position: 211-424
Cow position: chrX:47345472-47345265 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 144

Conread position: 212-489
Cow position: chrX:21986149-21986446 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 145, 102

Conread position: 215-577
Cow position: chrX:35413749-35413394 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 187, 86

Conread position: 216-563
Cow position: chrX:37574978-37574633 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 151

Conread position: 216-577
Cow position: chrX:618871-619246 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 36

Conread position: 217-541
Cow position: chrX:7278048-7277718 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 168, 138

Conread position: 220-479
Cow position: chrX:34314160-34313890 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 132

Conread position: 221-351
Cow position: chrX:4467100-4466970 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 221-369
Cow position: chrX:12972817-12972666 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 221-396
Cow position: chrX:11325965-11326141 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 125, 28

Conread position: 221-396
Cow position: chrX:22392852-22393027 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 141, 11

Conread position: 221-396
Cow position: chrX:27306587-27306411 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 131, 0

Conread position: 221-396
Cow position: chrX:42927691-42927860 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 221-410
Cow position: chrX:26881432-26881623 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 221-454
Cow position: chrX:34315654-34315407 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 221-463
Cow position: chrX:2523549-2523780 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 181, 131

Conread position: 221-468
Cow position: chrX:40685195-40685463 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 221-471
Cow position: chrX:37986358-37986098 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 54

Conread position: 221-492
Cow position: chrX:20584461-20584166 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 221-537
Cow position: chrX:10252067-10252379 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 67

Conread position: 221-549
Cow position: chrX:40035307-40035655 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 92

Conread position: 221-555
Cow position: chrX:22115184-22115497 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 221-559
Cow position: chrX:4043734-4044069 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 177, 63

Conread position: 221-559
Cow position: chrX:12979701-12980050 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 221-560
Cow position: chrX:6544387-6544036 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 68

Conread position: 221-560
Cow position: chrX:9201681-9201327 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 130

Conread position: 221-560
Cow position: chrX:9635058-9635401 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 147, 73

Conread position: 221-560
Cow position: chrX:13177343-13177685 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 221-560
Cow position: chrX:37232540-37232189 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 119

Conread position: 221-568
Cow position: chrX:22074933-22074572 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 221-569
Cow position: chrX:14883822-14884192 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 21

Conread position: 221-569
Cow position: chrX:34377075-34376727 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 199, 123

Conread position: 221-570
Cow position: chrX:35543020-35542660 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 35

Conread position: 221-571
Cow position: chrX:17795114-17794753 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 136

Conread position: 221-572
Cow position: chrX:39558216-39558581 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 134, 47

Conread position: 221-572
Cow position: chrX:45429889-45430250 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 153

Conread position: 221-575
Cow position: chrX:34411979-34411606 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 238

Conread position: 221-576
Cow position: chrX:42380979-42381337 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 180

Conread position: 222-512
Cow position: chrX:169414-169698 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 188, 83

Conread position: 222-550
Cow position: chrX:14973614-14973945 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 176, 85

Conread position: 222-555
Cow position: chrX:30543152-30543501 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 130, 316

Conread position: 222-560
Cow position: chrX:126899-126572 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 133, 89

Conread position: 222-560
Cow position: chrX:17964390-17964742 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 37

Conread position: 223-592
Cow position: chrX:25815772-25816151 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 28

Conread position: 225-511
Cow position: chrX:34792183-34792482 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 170, 46

Conread position: 225-571
Cow position: chrX:18694802-18695153 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 170, 64

Conread position: 226-549
Cow position: chrX:45846229-45845886 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 127, 91

Conread position: 226-560
Cow position: chrX:1503455-1503119 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 172, 81

Conread position: 226-560
Cow position: chrX:42171168-42171519 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 227-535
Cow position: chrX:47484138-47484467 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 169, 13

Conread position: 227-560
Cow position: chrX:15597153-15596818 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 176, 13

Conread position: 228-386
Cow position: chrX:19273581-19273744 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 228-396
Cow position: chrX:12082198-12082366 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 66

Conread position: 228-400
Cow position: chrX:34836938-34837103 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 21

Conread position: 228-410
Cow position: chrX:5135393-5135580 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 228-410
Cow position: chrX:18272932-18273113 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 61

Conread position: 228-410
Cow position: chrX:19469380-19469561 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 228-410
Cow position: chrX:41192830-41192647 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 142, 165

Conread position: 228-410
Cow position: chrX:46429693-46429875 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 124, 171

Conread position: 228-483
Cow position: chrX:23561984-23561729 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 15

Conread position: 228-511
Cow position: chrX:27145730-27145452 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 136

Conread position: 228-555
Cow position: chrX:34532646-34532312 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 245

Conread position: 228-557
Cow position: chrX:22624602-22624264 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 128, 297

Conread position: 228-560
Cow position: chrX:917242-917589 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 109

Conread position: 228-560
Cow position: chrX:1514293-1514621 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 173, 61

Conread position: 228-560
Cow position: chrX:7572032-7571686 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 7

Conread position: 228-560
Cow position: chrX:9650898-9651266 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 131, 0

Conread position: 228-560
Cow position: chrX:11717657-11718000 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 136, 261

Conread position: 228-560
Cow position: chrX:17888297-17888626 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 81

Conread position: 228-560
Cow position: chrX:23497565-23497883 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 143, 73

Conread position: 228-560
Cow position: chrX:27431792-27432139 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 179

Conread position: 228-560
Cow position: chrX:35224422-35224082 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 120

Conread position: 228-560
Cow position: chrX:38642375-38642040 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 136

Conread position: 228-561
Cow position: chrX:29601702-29602054 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 131, 250

Conread position: 228-567
Cow position: chrX:12437146-12437466 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 184, 41

Conread position: 228-570
Cow position: chrX:34565410-34565066 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 47

Conread position: 228-571
Cow position: chrX:15007023-15007383 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 161, 136

Conread position: 228-572
Cow position: chrX:11073065-11073424 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 227

Conread position: 228-572
Cow position: chrX:38094394-38094758 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 137, 61

Conread position: 228-577
Cow position: chrX:33855094-33855471 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 30

Conread position: 228-577
Cow position: chrX:44961877-44961509 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 243

Conread position: 228-579
Cow position: chrX:38549573-38549208 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 133

Conread position: 229-459
Cow position: chrX:41871192-41870950 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 230-557
Cow position: chrX:37910569-37910235 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 135, 185

Conread position: 232-557
Cow position: chrX:24424279-24424605 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 158, 149

Conread position: 234-530
Cow position: chrX:47362503-47362802 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 224

Conread position: 238-560
Cow position: chrX:1615927-1616268 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 105, 63

Conread position: 240-560
Cow position: chrX:21064397-21064066 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 145, 251

Conread position: 240-577
Cow position: chrX:25713909-25713563 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 23

Conread position: 241-552
Cow position: chrX:3130685-3130369 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 17

Conread position: 241-555
Cow position: chrX:42492410-42492729 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 114

Conread position: 241-560
Cow position: chrX:10959282-10959623 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 18

Conread position: 241-560
Cow position: chrX:31442716-31443041 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 251

Conread position: 241-566
Cow position: chrX:10411873-10412212 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 156, 116

Conread position: 241-572
Cow position: chrX:7509252-7508906 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 40

Conread position: 241-572
Cow position: chrX:38936813-38936468 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 110, 233

Conread position: 246-559
Cow position: chrX:20801877-20801560 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 159

Conread position: 246-560
Cow position: chrX:17630693-17631022 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 34

Conread position: 246-560
Cow position: chrX:45968256-45967942 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 92

Conread position: 246-577
Cow position: chrX:23513909-23514256 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 64

Conread position: 246-577
Cow position: chrX:26625563-26625915 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 247-560
Cow position: chrX:36840970-36840653 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 162, 54

Conread position: 247-571
Cow position: chrX:11856538-11856197 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 240

Conread position: 257-560
Cow position: chrX:17542058-17541744 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 209

Conread position: 257-560
Cow position: chrX:28865909-28866212 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 31

Conread position: 257-560
Cow position: chrX:45414207-45414520 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 138, 85

Conread position: 257-561
Cow position: chrX:13913172-13912858 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 219

Conread position: 257-570
Cow position: chrX:17662501-17662828 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 36

Conread position: 257-572
Cow position: chrX:27680495-27680170 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 226

Conread position: 257-577
Cow position: chrX:42498951-42499267 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 33

Conread position: 258-400
Cow position: chrX:44095356-44095214 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 140

Conread position: 258-473
Cow position: chrX:5919588-5919359 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 258-538
Cow position: chrX:29544781-29545078 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 251

Conread position: 258-547
Cow position: chrX:10831391-10831704 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 258-555
Cow position: chrX:41733103-41733403 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 75

Conread position: 258-560
Cow position: chrX:3154147-3154466 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 5

Conread position: 258-560
Cow position: chrX:7646347-7646038 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 87, 96

Conread position: 258-560
Cow position: chrX:9041148-9041449 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 24

Conread position: 258-560
Cow position: chrX:12290815-12290515 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 146, 94

Conread position: 258-560
Cow position: chrX:23583657-23583338 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 258-560
Cow position: chrX:29289674-29289356 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 133, 95

Conread position: 258-560
Cow position: chrX:34441358-34441670 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 138, 83

Conread position: 258-560
Cow position: chrX:35268957-35268670 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 132, 43

Conread position: 258-560
Cow position: chrX:35387831-35388127 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 29

Conread position: 258-560
Cow position: chrX:38964204-38963889 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 108, 199

Conread position: 258-560
Cow position: chrX:40692655-40692958 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 197
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 80

Conread position: 258-560
Cow position: chrX:41084011-41083705 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 143

Conread position: 258-560
Cow position: chrX:46532399-46532729 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 107, 185

Conread position: 258-561
Cow position: chrX:36283436-36283124 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 258-571
Cow position: chrX:21672656-21672319 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 258-571
Cow position: chrX:31250484-31250160 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 138, 204

Conread position: 258-571
Cow position: chrX:39545883-39546205 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 96, 51

Conread position: 258-571
Cow position: chrX:42247086-42247417 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 105, 0

Conread position: 258-572
Cow position: chrX:2324692-2324402 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 303, 5

Conread position: 258-572
Cow position: chrX:25338283-25337946 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 5

Conread position: 258-572
Cow position: chrX:28134434-28134113 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 146, 10

Conread position: 258-574
Cow position: chrX:42011377-42011046 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 80

Conread position: 258-577
Cow position: chrX:21004780-21004446 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 218

Conread position: 258-577
Cow position: chrX:34543880-34543549 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 113, 235

Conread position: 258-581
Cow position: chrX:20697513-20697850 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 132, 96

Conread position: 258-591
Cow position: chrX:25035286-25035641 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 95

Conread position: 258-592
Cow position: chrX:37489815-37489476 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 213

Conread position: 259-560
Cow position: chrX:6488671-6488366 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 25

Conread position: 259-560
Cow position: chrX:34402095-34401777 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 242

Conread position: 259-571
Cow position: chrX:34503015-34502688 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 132, 96

Conread position: 260-504
Cow position: chrX:25207761-25208011 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 110, 99

Conread position: 260-556
Cow position: chrX:47145179-47144871 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 113, 80

Conread position: 260-560
Cow position: chrX:4865327-4865031 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 50

Conread position: 260-560
Cow position: chrX:19690309-19689998 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 134, 82

Conread position: 260-572
Cow position: chrX:20339798-20340124 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 132, 75

Conread position: 261-536
Cow position: chrX:16996585-16996310 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 134

Conread position: 261-539
Cow position: chrX:45149261-45148975 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 93, 124

Conread position: 261-542
Cow position: chrX:33000998-33000701 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 23

Conread position: 261-551
Cow position: chrX:3580037-3579735 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 134, 92

Conread position: 261-560
Cow position: chrX:11844148-11844461 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 102

Conread position: 261-560
Cow position: chrX:23563698-23564017 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 135, 110

Conread position: 261-560
Cow position: chrX:27508931-27509240 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 14

Conread position: 261-560
Cow position: chrX:27514951-27514648 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 134

Conread position: 261-560
Cow position: chrX:38935372-38935061 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 125, 43

Conread position: 261-560
Cow position: chrX:46722641-46722961 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 60

Conread position: 261-560
Cow position: chrX:47344389-47344074 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 202

Conread position: 261-566
Cow position: chrX:34238812-34238495 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 226

Conread position: 261-566
Cow position: chrX:48652628-48652953 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 69

Conread position: 261-567
Cow position: chrX:22813155-22812835 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 67

Conread position: 261-571
Cow position: chrX:40183261-40183582 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 93

Conread position: 261-572
Cow position: chrX:2467977-2467646 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 67

Conread position: 261-573
Cow position: chrX:17231828-17231500 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 261-573
Cow position: chrX:36976044-36975715 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 67

Conread position: 261-897
Cow position: chrX:21642389-21643051 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 446
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 84

Conread position: 262-547
Cow position: chrX:13429220-13429492 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 66

Conread position: 263-559
Cow position: chrX:7497334-7497026 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 75

Conread position: 263-560
Cow position: chrX:6265508-6265806 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 104, 27

Conread position: 263-560
Cow position: chrX:6278407-6278726 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 105, 0

Conread position: 263-560
Cow position: chrX:15305204-15305508 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 203

Conread position: 263-560
Cow position: chrX:31948844-31949151 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 214

Conread position: 263-561
Cow position: chrX:24827398-24827105 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 52

Conread position: 263-577
Cow position: chrX:23414277-23414606 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 77

Conread position: 264-551
Cow position: chrX:29542127-29542430 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 237

Conread position: 265-538
Cow position: chrX:43973634-43973360 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 184, 0

Conread position: 266-530
Cow position: chrX:23785735-23785463 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 97

Conread position: 269-560
Cow position: chrX:8517960-8517656 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 73

Conread position: 269-566
Cow position: chrX:5638084-5638395 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 129, 79

Conread position: 270-537
Cow position: chrX:36961726-36961438 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 86

Conread position: 270-569
Cow position: chrX:48800622-48800307 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 270-577
Cow position: chrX:25281399-25281706 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 46

Conread position: 271-577
Cow position: chrX:16416592-16416270 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 64

Conread position: 273-560
Cow position: chrX:678474-678788 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 79, 194

Conread position: 273-560
Cow position: chrX:11589507-11589812 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 86

Conread position: 276-569
Cow position: chrX:24105702-24105396 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 120, 99

Conread position: 280-577
Cow position: chrX:9855370-9855062 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 115, 30

Conread position: 280-577
Cow position: chrX:9954211-9953903 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 30

Conread position: 281-559
Cow position: chrX:13785287-13785586 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 274

Conread position: 284-560
Cow position: chrX:26875811-26876101 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 79, 211

Conread position: 285-547
Cow position: chrX:7361796-7362058 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 30

Conread position: 285-560
Cow position: chrX:11313711-11313998 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 54

Conread position: 285-582
Cow position: chrX:46372697-46372983 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 29

Conread position: 288-601
Cow position: chrX:18248357-18248052 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 20

Conread position: 290-560
Cow position: chrX:14900669-14900941 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 21

Conread position: 290-560
Cow position: chrX:34192734-34192457 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 45

Conread position: 291-541
Cow position: chrX:39938460-39938724 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 73

Conread position: 292-560
Cow position: chrX:48227563-48227833 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 92, 102

Conread position: 293-543
Cow position: chrX:905395-905142 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 49

Conread position: 293-571
Cow position: chrX:30729350-30729636 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 84

Conread position: 294-548
Cow position: chrX:38114228-38113979 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 136, 61

Conread position: 294-557
Cow position: chrX:2186312-2186041 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 17

Conread position: 296-560
Cow position: chrX:1978570-1978285 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 30

Conread position: 296-577
Cow position: chrX:19210357-19210634 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 19

Conread position: 297-553
Cow position: chrX:26940447-26940705 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 42

Conread position: 297-560
Cow position: chrX:34991093-34990821 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 68, 200

Conread position: 298-560
Cow position: chrX:40789268-40788984 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 298-572
Cow position: chrX:3160972-3161249 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 111

Conread position: 304-560
Cow position: chrX:42994663-42994394 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 94, 60

Conread position: 304-566
Cow position: chrX:19015487-19015216 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 175

Conread position: 304-569
Cow position: chrX:35681392-35681115 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 175

Conread position: 321-572
Cow position: chrX:38439514-38439240 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 326-560
Cow position: chrX:48371119-48370876 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 23, 140

Conread position: 331-560
Cow position: chrX:48536657-48536885 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 65

Conread position: 332-577
Cow position: chrX:6640128-6639886 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 97, 33

Conread position: 333-560
Cow position: chrX:20583044-20582810 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 129

Conread position: 338-571
Cow position: chrX:10415531-10415758 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 11

Conread position: 342-560
Cow position: chrX:21256025-21255817 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 25

Conread position: 349-571
Cow position: chrX:42086861-42086630 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 14

Conread position: 352-577
Cow position: chrX:48676067-48675839 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 111

Conread position: 354-556
Cow position: chrX:40567604-40567383 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 355-566
Cow position: chrX:6607404-6607195 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 31, 37

Conread position: 355-572
Cow position: chrX:37067315-37067100 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 196, 17

Conread position: 359-556
Cow position: chrX:31473503-31473306 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 188, 47

Conread position: 362-582
Cow position: chrX:4554379-4554156 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 148

Conread position: 364-560
Cow position: chrX:16789861-16790057 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 118

Conread position: 364-590
Cow position: chrX:31745071-31745299 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 48, 68

Conread position: 367-564
Cow position: chrX:20653368-20653170 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 58

Conread position: 379-564
Cow position: chrX:13245550-13245366 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 182, 12

Conread position: 380-560
Cow position: chrX:42507689-42507867 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 83

Conread position: 381-560
Cow position: chrX:3654561-3654384 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 381-566
Cow position: chrX:26883181-26883360 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 129, 10

Conread position: 382-561
Cow position: chrX:41403931-41403751 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 10

Conread position: 382-561
Cow position: chrX:41410479-41410299 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 10

Conread position: 382-567
Cow position: chrX:28111459-28111279 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 23

Conread position: 382-634
Cow position: chrX:7721941-7721687 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 22

Conread position: 383-567
Cow position: chrX:41743863-41743686 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 8

Conread position: 384-549
Cow position: chrX:6234502-6234658 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 7

Conread position: 384-560
Cow position: chrX:13058535-13058360 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 7

Conread position: 384-566
Cow position: chrX:33632132-33631950 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 7

Conread position: 385-557
Cow position: chrX:11675014-11674847 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 22

Conread position: 389-560
Cow position: chrX:35409608-35409448 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 86

Conread position: 391-560
Cow position: chrX:21663263-21663089 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 144

Conread position: 395-560
Cow position: chrX:1728474-1728637 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 107

Conread position: 395-561
Cow position: chrX:41192625-41192466 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 395-572
Cow position: chrX:39346842-39347019 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 29

Conread position: 399-557
Cow position: chrX:25163752-25163601 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 399-566
Cow position: chrX:42841113-42841276 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 399-577
Cow position: chrX:11448133-11448310 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 164, 13

Conread position: 401-569
Cow position: chrX:13868624-13868464 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 160, 16

Conread position: 404-560
Cow position: chrX:10107041-10107195 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 404-567
Cow position: chrX:22873334-22873171 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 405-560
Cow position: chrX:45043496-45043338 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 154

Conread position: 406-567
Cow position: chrX:25283219-25283373 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 61

Conread position: 407-554
Cow position: chrX:46315448-46315593 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 136, 0

Conread position: 407-560
Cow position: chrX:8558530-8558683 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 407-560
Cow position: chrX:19930582-19930436 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 407-567
Cow position: chrX:36249932-36250089 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 59

Conread position: 407-573
Cow position: chrX:46429929-46430093 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 134, 59

Conread position: 407-577
Cow position: chrX:4942825-4942987 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 408-532
Cow position: chrX:45874927-45874806 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 70

Conread position: 408-539
Cow position: chrX:30832919-30833045 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 408-541
Cow position: chrX:17908358-17908485 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 408-547
Cow position: chrX:32420148-32420011 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 76

Conread position: 408-549
Cow position: chrX:9425812-9425951 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 17

Conread position: 408-551
Cow position: chrX:16324036-16324175 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 51

Conread position: 408-558
Cow position: chrX:28846953-28847097 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 49

Conread position: 408-558
Cow position: chrX:37843651-37843502 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 18, 76

Conread position: 408-558
Cow position: chrX:45566566-45566412 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 408-560
Cow position: chrX:3653690-3653543 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 17

Conread position: 408-560
Cow position: chrX:4750376-4750518 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 408-560
Cow position: chrX:8899958-8899804 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 408-560
Cow position: chrX:9997407-9997553 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 408-560
Cow position: chrX:15485696-15485848 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 71

Conread position: 408-560
Cow position: chrX:15545822-15545677 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 47

Conread position: 408-560
Cow position: chrX:19019178-19019332 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 38

Conread position: 408-560
Cow position: chrX:21593216-21593063 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 408-560
Cow position: chrX:27106191-27106038 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 408-560
Cow position: chrX:30962945-30963092 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 58

Conread position: 408-560
Cow position: chrX:32020191-32020342 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 68

Conread position: 408-560
Cow position: chrX:34754259-34754412 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 408-560
Cow position: chrX:35042153-35041999 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 408-560
Cow position: chrX:38967576-38967430 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 44

Conread position: 408-560
Cow position: chrX:40647914-40647758 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 38

Conread position: 408-560
Cow position: chrX:42339014-42339156 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 408-560
Cow position: chrX:42461816-42461966 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 408-560
Cow position: chrX:42855343-42855188 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 408-560
Cow position: chrX:42874912-42874758 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 138

Conread position: 408-560
Cow position: chrX:44731526-44731374 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 408-566
Cow position: chrX:36778340-36778180 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 408-567
Cow position: chrX:17498013-17497869 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 408-567
Cow position: chrX:40116349-40116198 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 408-569
Cow position: chrX:15147259-15147416 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 60

Conread position: 408-569
Cow position: chrX:25238105-25237948 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 66

Conread position: 408-569
Cow position: chrX:37836517-37836356 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 49

Conread position: 408-569
Cow position: chrX:40452281-40452443 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 153, 0

Conread position: 408-571
Cow position: chrX:14599461-14599297 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 151, 0

Conread position: 408-571
Cow position: chrX:14924929-14924768 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 75

Conread position: 408-571
Cow position: chrX:41167036-41167196 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 66

Conread position: 408-577
Cow position: chrX:47248856-47249026 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 30

Conread position: 408-583
Cow position: chrX:877098-877265 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 38

Conread position: 408-590
Cow position: chrX:12309457-12309642 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 34

Conread position: 408-591
Cow position: chrX:11806085-11806271 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 154, 0

Conread position: 409-541
Cow position: chrX:1176052-1176184 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 409-545
Cow position: chrX:38218637-38218500 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 15

Conread position: 409-547
Cow position: chrX:26285909-26285772 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 67

Conread position: 409-552
Cow position: chrX:27174923-27174782 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 73

Conread position: 409-555
Cow position: chrX:41238443-41238578 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 409-556
Cow position: chrX:7718783-7718637 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 33

Conread position: 409-560
Cow position: chrX:2383416-2383269 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 58

Conread position: 409-560
Cow position: chrX:7806309-7806157 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 109

Conread position: 409-560
Cow position: chrX:12249730-12249585 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 52

Conread position: 409-560
Cow position: chrX:15139618-15139765 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 72

Conread position: 409-560
Cow position: chrX:41674037-41673883 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 409-560
Cow position: chrX:45694033-45693886 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 409-567
Cow position: chrX:28098045-28097898 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 409-567
Cow position: chrX:32128054-32128207 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 55

Conread position: 409-571
Cow position: chrX:754890-754726 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 409-572
Cow position: chrX:32978326-32978489 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 152, 91

Conread position: 409-577
Cow position: chrX:23970311-23970151 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 57

Conread position: 409-581
Cow position: chrX:20710002-20709828 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 152, 0

Conread position: 410-558
Cow position: chrX:13265697-13265838 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 410-560
Cow position: chrX:26440852-26441000 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 47

Conread position: 410-560
Cow position: chrX:31260700-31260850 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 410-566
Cow position: chrX:35609915-35609760 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 64

Conread position: 410-567
Cow position: chrX:21665666-21665820 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 65

Conread position: 410-571
Cow position: chrX:27516455-27516300 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 50

Conread position: 412-558
Cow position: chrX:7425393-7425247 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 412-560
Cow position: chrX:11746770-11746622 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 64

Conread position: 412-567
Cow position: chrX:21795420-21795269 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 70

Conread position: 412-624
Cow position: chrX:29770249-29770465 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 413-558
Cow position: chrX:46989867-46990002 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 413-560
Cow position: chrX:11562079-11561934 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 413-560
Cow position: chrX:37299523-37299376 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 129

Conread position: 413-569
Cow position: chrX:17743987-17743830 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 149, 0

Conread position: 413-577
Cow position: chrX:17271362-17271527 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 156, 0

Conread position: 413-577
Cow position: chrX:43049272-43049104 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 414-571
Cow position: chrX:10916671-10916522 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 52

Conread position: 414-571
Cow position: chrX:33205072-33205224 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 43

Conread position: 414-572
Cow position: chrX:9252254-9252411 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 148, 14

Conread position: 416-555
Cow position: chrX:33466532-33466398 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 51

Conread position: 420-560
Cow position: chrX:2523809-2523950 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 420-560
Cow position: chrX:29049880-29049750 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 421-555
Cow position: chrX:26619446-26619578 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 421-557
Cow position: chrX:25419243-25419378 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 421-558
Cow position: chrX:48236731-48236593 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 9

Conread position: 421-572
Cow position: chrX:9838057-9837905 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 0

Conread position: 422-571
Cow position: chrX:18812168-18812027 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 424-554
Cow position: chrX:46771056-46771186 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 53

Conread position: 424-556
Cow position: chrX:29509532-29509660 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 424-556
Cow position: chrX:42587514-42587645 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 424-557
Cow position: chrX:25036787-25036918 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 33

Conread position: 424-560
Cow position: chrX:7351211-7351079 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 424-560
Cow position: chrX:7382235-7382103 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 424-560
Cow position: chrX:9360798-9360663 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 424-560
Cow position: chrX:10437751-10437885 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 424-560
Cow position: chrX:16541762-16541896 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 424-560
Cow position: chrX:18456308-18456172 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 424-560
Cow position: chrX:19188849-19188716 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 424-560
Cow position: chrX:33020397-33020266 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 424-560
Cow position: chrX:45787563-45787434 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 424-567
Cow position: chrX:48211064-48211209 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 424-569
Cow position: chrX:8492842-8492988 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 424-572
Cow position: chrX:16531909-16531766 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 137, 37

Conread position: 424-577
Cow position: chrX:2029305-2029152 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 119

Conread position: 424-577
Cow position: chrX:25617996-25618150 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 424-577
Cow position: chrX:38840801-38840650 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 14

Conread position: 424-577
Cow position: chrX:47243362-47243517 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 426-560
Cow position: chrX:4123741-4123615 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 426-567
Cow position: chrX:16762676-16762544 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 55

Conread position: 427-549
Cow position: chrX:47046606-47046729 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 427-560
Cow position: chrX:27446599-27446468 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 29

Conread position: 427-572
Cow position: chrX:41790535-41790677 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 29

Conread position: 428-560
Cow position: chrX:43527411-43527283 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 429-567
Cow position: chrX:32870876-32871013 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 429-567
Cow position: chrX:47247005-47247136 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 434-571
Cow position: chrX:33538849-33538716 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 47

Conread position: 435-555
Cow position: chrX:5856422-5856542 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 438-577
Cow position: chrX:33519519-33519381 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 0

Conread position: 440-560
Cow position: chrX:29193903-29193788 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 22

Conread position: 449-562
Cow position: chrX:919402-919516 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 97

Conread position: 494-898
Cow position: chrX:6196282-6196685 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 225
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 193

Conread position: 547-898
Cow position: chrX:16086327-16085972 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 140

Conread position: 554-898
Cow position: chrX:10300639-10300981 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 18

Conread position: 555-898
Cow position: chrX:22126089-22126427 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 6

Conread position: 557-898
Cow position: chrX:35027996-35027663 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 35

Conread position: 559-784
Cow position: chrX:38153019-38153246 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 127

Conread position: 559-897
Cow position: chrX:25406062-25406396 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 76, 127

Conread position: 559-898
Cow position: chrX:22818763-22818421 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 66

Conread position: 560-826
Cow position: chrX:25451023-25450752 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 127

Conread position: 560-898
Cow position: chrX:3465674-3466015 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 126

Conread position: 560-898
Cow position: chrX:14462008-14461665 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 129

Conread position: 561-844
Cow position: chrX:13431253-13431525 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 11

Conread position: 561-892
Cow position: chrX:1788244-1787917 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 123

Conread position: 561-897
Cow position: chrX:503195-503524 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 55

Conread position: 561-897
Cow position: chrX:26623123-26623455 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 64, 9

Conread position: 561-897
Cow position: chrX:33829727-33829392 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 11

Conread position: 561-898
Cow position: chrX:12464689-12464355 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 71, 11

Conread position: 561-898
Cow position: chrX:26274828-26274492 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 11

Conread position: 561-898
Cow position: chrX:36839399-36839068 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 11

Conread position: 561-898
Cow position: chrX:43437217-43437557 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 11

Conread position: 561-900
Cow position: chrX:7810270-7810609 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 11

Conread position: 562-900
Cow position: chrX:16231173-16231493 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 19

Conread position: 563-890
Cow position: chrX:21591977-21591647 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 128

Conread position: 563-897
Cow position: chrX:12312317-12312650 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 124

Conread position: 563-898
Cow position: chrX:21226164-21225827 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 122

Conread position: 563-898
Cow position: chrX:42732564-42732228 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 47

Conread position: 564-779
Cow position: chrX:8640471-8640254 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 122

Conread position: 564-784
Cow position: chrX:4623270-4623492 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 122

Conread position: 564-810
Cow position: chrX:14459722-14459966 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 122

Conread position: 564-884
Cow position: chrX:1013769-1013449 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 18

Conread position: 564-896
Cow position: chrX:22612093-22611758 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 122

Conread position: 564-896
Cow position: chrX:31979156-31979485 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 122

Conread position: 564-897
Cow position: chrX:21767317-21766980 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 123

Conread position: 564-897
Cow position: chrX:22539351-22539689 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 122

Conread position: 564-897
Cow position: chrX:39713234-39712901 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 36

Conread position: 564-898
Cow position: chrX:2117706-2118043 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:2479945-2480281 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:2487330-2486999 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 209, 73

Conread position: 564-898
Cow position: chrX:2813792-2814130 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:5332748-5333085 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:5360693-5360356 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:5865829-5865488 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 123

Conread position: 564-898
Cow position: chrX:6580618-6580291 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:8482134-8481798 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 121

Conread position: 564-898
Cow position: chrX:9086393-9086061 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:10529101-10529440 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:11146652-11146992 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 121

Conread position: 564-898
Cow position: chrX:13071762-13072099 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:13092322-13092659 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:13244342-13244005 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:15260932-15261270 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:16045655-16045318 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:17054254-17053917 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:18222096-18221762 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:18657121-18657458 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:19398461-19398123 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:19474465-19474802 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:20357316-20357653 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:22565001-22565338 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:24412710-24412376 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 36

Conread position: 564-898
Cow position: chrX:24468438-24468776 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 123

Conread position: 564-898
Cow position: chrX:26231075-26231412 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:28587666-28587328 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 39, 123

Conread position: 564-898
Cow position: chrX:30053785-30054121 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 222
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:31495421-31495083 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 104

Conread position: 564-898
Cow position: chrX:35532539-35532206 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:36536046-36536383 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:37814834-37814497 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 61, 122

Conread position: 564-898
Cow position: chrX:37851821-37851492 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 115

Conread position: 571-892
Cow position: chrX:35384175-35384477 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 267, 39

Conread position: 574-898
Cow position: chrX:23573134-23573459 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 112

Conread position: 576-898
Cow position: chrX:15176767-15177087 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 23

Conread position: 577-861
Cow position: chrX:2382137-2381850 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 47

Conread position: 577-880
Cow position: chrX:27423598-27423903 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 109

Conread position: 577-897
Cow position: chrX:12308092-12308415 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:2560277-2560598 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:5281113-5281436 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 56, 38

Conread position: 577-898
Cow position: chrX:13929063-13929387 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:14125573-14125897 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 26, 110

Conread position: 577-898
Cow position: chrX:14597527-14597203 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:15978281-15978605 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:15992981-15992662 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 109

Conread position: 577-898
Cow position: chrX:19608347-19608023 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:21389248-21388931 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 204
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 108

Conread position: 577-898
Cow position: chrX:21582112-21581789 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:22810566-22810242 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:23134267-23133945 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 106

Conread position: 577-898
Cow position: chrX:28753666-28753990 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 48, 109

Conread position: 577-898
Cow position: chrX:29094648-29094968 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 196, 61

Conread position: 577-898
Cow position: chrX:29171110-29171434 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 109

Conread position: 577-899
Cow position: chrX:27983683-27984006 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 116

Conread position: 577-900
Cow position: chrX:2579091-2578766 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 109

Conread position: 577-900
Cow position: chrX:23236566-23236237 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 113

Conread position: 578-898
Cow position: chrX:27317900-27317577 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 108

Conread position: 582-791
Cow position: chrX:509423-509633 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 102

Conread position: 582-816
Cow position: chrX:2607085-2606850 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 104

Conread position: 582-825
Cow position: chrX:16804200-16804441 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 104

Conread position: 582-825
Cow position: chrX:16809147-16809388 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 104

Conread position: 582-837
Cow position: chrX:22837647-22837397 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 104

Conread position: 582-839
Cow position: chrX:5550046-5549791 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 104

Conread position: 582-894
Cow position: chrX:5298575-5298890 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 104

Conread position: 582-896
Cow position: chrX:27591355-27591672 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 104

Conread position: 582-896
Cow position: chrX:30181259-30181576 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 104

Conread position: 582-897
Cow position: chrX:17487974-17488280 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 104

Conread position: 582-897
Cow position: chrX:18899157-18899471 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 69, 43

Conread position: 582-898
Cow position: chrX:387801-387485 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 14

Conread position: 582-898
Cow position: chrX:2879055-2879375 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 43

Conread position: 582-898
Cow position: chrX:7120159-7119839 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 18

Conread position: 582-898
Cow position: chrX:7754571-7754253 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 18

Conread position: 582-898
Cow position: chrX:9010999-9010680 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 104

Conread position: 582-898
Cow position: chrX:9095308-9094993 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 104

Conread position: 582-898
Cow position: chrX:12144764-12144445 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:14782680-14782999 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 103

Conread position: 582-898
Cow position: chrX:15621866-15622194 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:16702348-16702031 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 103

Conread position: 582-898
Cow position: chrX:18951065-18951384 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:23279692-23279374 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 104

Conread position: 582-898
Cow position: chrX:23387882-23388201 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:23453387-23453705 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:26755974-26756293 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:32064502-32064821 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 104

Conread position: 582-898
Cow position: chrX:38150265-38149946 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 104

Conread position: 582-900
Cow position: chrX:27978165-27978477 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 191, 44

Conread position: 583-892
Cow position: chrX:34008446-34008138 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 31

Conread position: 583-898
Cow position: chrX:30229447-30229765 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 103

Conread position: 584-892
Cow position: chrX:3082480-3082785 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 108

Conread position: 584-896
Cow position: chrX:15122507-15122813 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 189, 18

Conread position: 588-897
Cow position: chrX:18246757-18246459 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 185, 75

Conread position: 592-897
Cow position: chrX:24462784-24463087 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 18

Conread position: 593-898
Cow position: chrX:15377987-15378290 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 72

Conread position: 593-899
Cow position: chrX:3122737-3123041 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 84

Conread position: 597-900
Cow position: chrX:29877873-29878180 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 90

Conread position: 599-900
Cow position: chrX:17260215-17260522 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 88

Conread position: 610-892
Cow position: chrX:8513932-8513648 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 79

Conread position: 616-898
Cow position: chrX:30437537-30437254 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 27, 36

Conread position: 619-889
Cow position: chrX:20133525-20133797 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 67

Conread position: 624-898
Cow position: chrX:12359512-12359237 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 60

Conread position: 637-898
Cow position: chrX:33774018-33774275 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 136, 45

Conread position: 638-813
Cow position: chrX:4300334-4300504 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 135, 45

Conread position: 638-892
Cow position: chrX:42009237-42008983 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 204, 45

Conread position: 638-894
Cow position: chrX:16781889-16781636 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 135, 45

Conread position: 638-895
Cow position: chrX:730955-731209 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 45

Conread position: 638-896
Cow position: chrX:3397044-3397290 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 45

Conread position: 638-897
Cow position: chrX:29911941-29911682 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:2047692-2047433 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:3360428-3360171 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 135, 38

Conread position: 638-898
Cow position: chrX:5321105-5321365 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:19212687-19212950 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 45

Conread position: 638-898
Cow position: chrX:19401598-19401339 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:20741022-20741281 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:24322222-24322481 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 45

Conread position: 638-898
Cow position: chrX:30090427-30090676 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 46

Conread position: 638-898
Cow position: chrX:31728083-31727823 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 134, 45

Conread position: 638-898
Cow position: chrX:35887698-35887439 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:38963107-38963367 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 135, 45

Conread position: 638-898
Cow position: chrX:41153418-41153158 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 135, 45

Conread position: 639-896
Cow position: chrX:18289483-18289725 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 29

Conread position: 642-892
Cow position: chrX:29765616-29765362 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 41

Conread position: 643-897
Cow position: chrX:12345538-12345286 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 180, 40

Conread position: 643-897
Cow position: chrX:30112729-30112482 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 199, 46

Conread position: 643-898
Cow position: chrX:672390-672645 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 40

Conread position: 643-898
Cow position: chrX:3418615-3418871 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 40

Conread position: 643-898
Cow position: chrX:11462392-11462646 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 40

Conread position: 643-898
Cow position: chrX:12651889-12652144 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 40

Conread position: 643-898
Cow position: chrX:19621962-19621709 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 39

Conread position: 643-898
Cow position: chrX:29010071-29009828 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 41

Conread position: 643-898
Cow position: chrX:29941782-29941527 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 132, 38

Conread position: 643-898
Cow position: chrX:36022753-36022502 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 41

Conread position: 643-899
Cow position: chrX:26749667-26749920 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 155, 33

Conread position: 643-900
Cow position: chrX:10755170-10754915 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 130, 14

Conread position: 644-898
Cow position: chrX:10867249-10867504 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 39

Conread position: 645-897
Cow position: chrX:22331171-22331423 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 38

Conread position: 645-898
Cow position: chrX:21646681-21646932 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 38

Conread position: 645-900
Cow position: chrX:9403097-9403350 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 197, 38

Conread position: 646-898
Cow position: chrX:33815225-33815468 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 37

Conread position: 649-875
Cow position: chrX:25052410-25052635 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 192, 34

Conread position: 649-897
Cow position: chrX:29859846-29860092 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 34

Conread position: 650-898
Cow position: chrX:24200594-24200348 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 174, 33

Conread position: 653-898
Cow position: chrX:26341609-26341847 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 189, 29

Conread position: 653-898
Cow position: chrX:27645647-27645408 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 115, 37

Conread position: 653-899
Cow position: chrX:2271212-2270975 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 28

Conread position: 655-897
Cow position: chrX:41687203-41686962 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 34

Conread position: 655-898
Cow position: chrX:20366582-20366823 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 27

Conread position: 656-900
Cow position: chrX:4327100-4327340 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 186, 15

Conread position: 657-891
Cow position: chrX:3155929-3156162 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 26

Conread position: 657-898
Cow position: chrX:13415839-13416077 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 26

Conread position: 657-898
Cow position: chrX:40642804-40642563 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 116, 26

Conread position: 660-898
Cow position: chrX:31340080-31340317 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 181, 23

Conread position: 663-898
Cow position: chrX:12666747-12666982 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 19

Conread position: 686-897
Cow position: chrX:24806996-24807205 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 82, 101

Conread position: 686-898
Cow position: chrX:11458248-11458463 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 103

Conread position: 695-898
Cow position: chrX:21661509-21661714 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 92

Conread position: 695-898
Cow position: chrX:34093275-34093480 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 92

Conread position: 709-898
Cow position: chrX:4479939-4479746 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 77

Conread position: 712-898
Cow position: chrX:15569376-15569565 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 78

Conread position: 712-900
Cow position: chrX:23073682-23073492 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 37

Conread position: 713-898
Cow position: chrX:9127617-9127432 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 34

Conread position: 713-898
Cow position: chrX:16736541-16736723 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 74

Conread position: 713-898
Cow position: chrX:36194436-36194249 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 76

Conread position: 714-898
Cow position: chrX:23335368-23335553 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 75

Conread position: 718-898
Cow position: chrX:27304471-27304289 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 69

Conread position: 729-898
Cow position: chrX:302620-302451 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 58

Conread position: 731-900
Cow position: chrX:5668232-5668398 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 63

Show alignments to all cow chromosomes.