Cow genome map

Conread name: Ss1.1-rcbl0_003663.5

Conread position: 12-282
Cow position: chr25:27145510-27145769 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 13-186
Cow position: chr25:32577576-32577411 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 13-208
Cow position: chr25:31073510-31073323 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 13-225
Cow position: chr25:29357926-29357721 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 190, 46

Conread position: 13-227
Cow position: chr25:34503136-34502930 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 13-243
Cow position: chr25:393352-393568 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 13-249
Cow position: chr25:15367823-15368055 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 198, 46

Conread position: 13-253
Cow position: chr25:23366748-23366985 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 47

Conread position: 13-259
Cow position: chr25:34668033-34668272 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 43

Conread position: 13-262
Cow position: chr25:18269558-18269801 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 13-263
Cow position: chr25:7223346-7223104 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 13-263
Cow position: chr25:18424382-18424626 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 174, 18

Conread position: 13-265
Cow position: chr25:34013668-34013425 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 95, 46

Conread position: 13-267
Cow position: chr25:10136899-10137145 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 143, 46

Conread position: 13-267
Cow position: chr25:11124852-11125098 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 13-270
Cow position: chr25:12756334-12756093 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 13-270
Cow position: chr25:27019152-27018902 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 199, 46

Conread position: 13-272
Cow position: chr25:24655088-24654832 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 220, 46

Conread position: 13-281
Cow position: chr25:17995204-17994951 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 13-281
Cow position: chr25:29525781-29525521 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:3688221-3688482 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 13-282
Cow position: chr25:4522725-4522467 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 46

Conread position: 13-282
Cow position: chr25:6955154-6955414 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 192, 46

Conread position: 13-282
Cow position: chr25:8079949-8080213 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 181, 46

Conread position: 13-282
Cow position: chr25:8655378-8655636 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 13-282
Cow position: chr25:8934882-8935143 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:9395495-9395758 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 46

Conread position: 13-282
Cow position: chr25:9413433-9413690 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:10012976-10012711 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 18

Conread position: 13-282
Cow position: chr25:11043705-11043962 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 191, 46

Conread position: 13-282
Cow position: chr25:12939121-12938860 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 46

Conread position: 13-282
Cow position: chr25:13430026-13429769 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 46

Conread position: 13-282
Cow position: chr25:13787060-13787311 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 46

Conread position: 13-282
Cow position: chr25:13960153-13960406 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:14756326-14756068 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 47

Conread position: 13-282
Cow position: chr25:15429594-15429333 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:16801526-16801782 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 89, 46

Conread position: 13-282
Cow position: chr25:16922704-16922448 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:17211048-17210787 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:17657706-17657959 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 13-282
Cow position: chr25:17808692-17808432 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 13-282
Cow position: chr25:17904726-17904987 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:18190290-18190032 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:18330690-18330428 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 47

Conread position: 13-282
Cow position: chr25:18474284-18474538 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:19139486-19139225 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:19337239-19336980 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:19923607-19923868 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:20075562-20075819 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:20772248-20771990 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 213, 47

Conread position: 13-282
Cow position: chr25:21120395-21120660 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 230, 46

Conread position: 13-282
Cow position: chr25:22151191-22151452 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:22479892-22479629 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 118, 49

Conread position: 13-282
Cow position: chr25:23325939-23325682 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 13-282
Cow position: chr25:23740161-23739893 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 45

Conread position: 13-282
Cow position: chr25:24205044-24204790 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 102, 47

Conread position: 13-282
Cow position: chr25:24303180-24302920 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 191, 46

Conread position: 13-282
Cow position: chr25:24637054-24636797 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:25509975-25510236 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 13-282
Cow position: chr25:26353698-26353438 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 153, 46

Conread position: 13-282
Cow position: chr25:26705796-26705535 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:26896138-26896393 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 190, 21

Conread position: 13-282
Cow position: chr25:26914318-26914584 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 90, 39

Conread position: 13-282
Cow position: chr25:26922924-26923184 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:27231445-27231694 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 232, 46

Conread position: 13-282
Cow position: chr25:28264434-28264693 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 47

Conread position: 13-282
Cow position: chr25:28275582-28275324 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:28862958-28863216 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 13-282
Cow position: chr25:29313234-29312975 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 198, 44

Conread position: 13-282
Cow position: chr25:29802659-29802398 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:32610334-32610073 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 13-282
Cow position: chr25:34164475-34164215 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 13-282
Cow position: chr25:34343821-34343563 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:34509093-34508835 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:35553753-35554015 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 46

Conread position: 13-282
Cow position: chr25:35589163-35589424 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:35626149-35625875 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 84, 197

Conread position: 13-282
Cow position: chr25:35755157-35754898 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 34

Conread position: 13-282
Cow position: chr25:36350824-36351085 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:39386743-39386485 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 13-282
Cow position: chr25:41121090-41121348 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 13-285
Cow position: chr25:13941648-13941385 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 13-285
Cow position: chr25:26781000-26780736 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 13-285
Cow position: chr25:30526285-30526026 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 13-285
Cow position: chr25:33262715-33262985 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 206, 43

Conread position: 13-285
Cow position: chr25:40322204-40321940 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 47

Conread position: 13-287
Cow position: chr25:11955917-11956178 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 13-287
Cow position: chr25:18321530-18321791 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 39

Conread position: 13-287
Cow position: chr25:23913756-23914019 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 137, 47

Conread position: 13-287
Cow position: chr25:26755373-26755640 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 22, 48

Conread position: 13-287
Cow position: chr25:41364881-41364617 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 35

Conread position: 13-291
Cow position: chr25:17585936-17585667 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 273, 46

Conread position: 13-299
Cow position: chr25:12834281-12834015 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 273, 32

Conread position: 14-196
Cow position: chr25:33574651-33574475 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 46

Conread position: 14-201
Cow position: chr25:17562123-17562305 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 53

Conread position: 14-270
Cow position: chr25:14011931-14012176 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 14-276
Cow position: chr25:11152006-11151751 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 43

Conread position: 14-281
Cow position: chr25:477900-478160 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 190, 11

Conread position: 14-281
Cow position: chr25:36512372-36512620 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 14-282
Cow position: chr25:2516089-2516353 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 171, 45

Conread position: 14-282
Cow position: chr25:7800099-7800363 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 14-282
Cow position: chr25:17993060-17992800 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 243, 46

Conread position: 14-282
Cow position: chr25:18490153-18490418 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 173, 38

Conread position: 14-282
Cow position: chr25:25826540-25826800 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 180, 16

Conread position: 14-282
Cow position: chr25:37593490-37593750 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 252, 45

Conread position: 14-282
Cow position: chr25:40660977-40661235 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 44

Conread position: 14-282
Cow position: chr25:41367060-41366806 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 14-287
Cow position: chr25:41105443-41105178 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 155, 38

Conread position: 15-253
Cow position: chr25:14394005-14393775 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 189, 44

Conread position: 15-282
Cow position: chr25:4858411-4858151 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 197, 44

Conread position: 15-282
Cow position: chr25:9647046-9647299 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 15-282
Cow position: chr25:10180670-10180923 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 153, 44

Conread position: 15-282
Cow position: chr25:18486547-18486806 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 15-282
Cow position: chr25:18886393-18886137 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 15-282
Cow position: chr25:20613629-20613879 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 195, 28

Conread position: 15-282
Cow position: chr25:26282112-26282371 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 15-282
Cow position: chr25:34673498-34673241 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 15-282
Cow position: chr25:35446032-35446288 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 45

Conread position: 15-282
Cow position: chr25:35567798-35567543 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 15-282
Cow position: chr25:40389647-40389390 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 15-282
Cow position: chr25:41135658-41135404 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 32, 0

Conread position: 15-287
Cow position: chr25:33688120-33687854 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 266, 46

Conread position: 15-288
Cow position: chr25:18072313-18072570 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 16-282
Cow position: chr25:18265276-18265537 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 36

Conread position: 16-282
Cow position: chr25:33838474-33838720 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 16-285
Cow position: chr25:19367604-19367349 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 20-282
Cow position: chr25:2594855-2595113 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 106, 40

Conread position: 20-282
Cow position: chr25:12082258-12082010 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 20-282
Cow position: chr25:23672779-23672518 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 73, 42

Conread position: 21-282
Cow position: chr25:41356703-41356454 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 21-286
Cow position: chr25:2648339-2648591 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 38

Conread position: 22-282
Cow position: chr25:34122001-34121748 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 197, 37

Conread position: 25-281
Cow position: chr25:16309108-16308845 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 148, 35

Conread position: 25-282
Cow position: chr25:16401794-16401544 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 25-282
Cow position: chr25:21966487-21966736 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 30-282
Cow position: chr25:16430915-16430671 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 174, 29

Conread position: 34-274
Cow position: chr25:9054769-9054998 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 34-282
Cow position: chr25:41098091-41097851 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 35-278
Cow position: chr25:9957664-9957439 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 47-282
Cow position: chr25:35613222-35612990 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 34

Conread position: 52-282
Cow position: chr25:15453135-15453363 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 30

Conread position: 55-273
Cow position: chr25:25480484-25480279 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 26

Conread position: 57-282
Cow position: chr25:17994397-17994176 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 61-282
Cow position: chr25:18022883-18023100 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 148, 5

Conread position: 62-282
Cow position: chr25:11665793-11666009 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 63-280
Cow position: chr25:21903570-21903782 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 63-282
Cow position: chr25:21950251-21950475 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 63-294
Cow position: chr25:24776483-24776711 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 126

Conread position: 64-265
Cow position: chr25:14790364-14790563 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 64-270
Cow position: chr25:35617003-35617203 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 64-278
Cow position: chr25:17420398-17420187 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 140, 17

Conread position: 64-282
Cow position: chr25:14954905-14954693 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 64-282
Cow position: chr25:36127774-36127561 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 64-285
Cow position: chr25:15024299-15024522 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 16

Conread position: 65-282
Cow position: chr25:23393997-23394209 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 66-222
Cow position: chr25:24459587-24459435 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 66-273
Cow position: chr25:34494016-34493818 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 66-282
Cow position: chr25:22111438-22111641 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 67-282
Cow position: chr25:20006285-20006504 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 145, 13

Conread position: 67-282
Cow position: chr25:26681710-26681925 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 13

Conread position: 68-282
Cow position: chr25:19682418-19682635 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 12

Conread position: 68-321
Cow position: chr25:13961689-13961932 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 81-282
Cow position: chr25:9595462-9595660 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 22, 26

Conread position: 81-282
Cow position: chr25:36757274-36757474 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 17

Conread position: 82-282
Cow position: chr25:21025101-21024892 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 83-281
Cow position: chr25:17716755-17716948 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 83-282
Cow position: chr25:13241747-13241946 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 83-282
Cow position: chr25:20369249-20369443 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 83-296
Cow position: chr25:22576670-22576467 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 129, 22

Conread position: 85-282
Cow position: chr25:5570606-5570804 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 157, 0

Conread position: 86-282
Cow position: chr25:20495695-20495883 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 86-282
Cow position: chr25:25290373-25290564 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 91

Conread position: 87-282
Cow position: chr25:3172265-3172071 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 58

Conread position: 88-278
Cow position: chr25:25119176-25119366 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 125

Conread position: 91-282
Cow position: chr25:11896338-11896147 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 113, 97

Conread position: 91-282
Cow position: chr25:18324201-18324012 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 18

Conread position: 91-282
Cow position: chr25:27609324-27609512 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 97

Conread position: 91-282
Cow position: chr25:40141350-40141157 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 92-281
Cow position: chr25:14774303-14774494 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 134

Conread position: 92-282
Cow position: chr25:2369778-2369976 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 177

Conread position: 92-282
Cow position: chr25:10606563-10606375 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 156, 97

Conread position: 92-282
Cow position: chr25:21414317-21414128 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 92-282
Cow position: chr25:27076218-27076405 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 158, 0

Conread position: 92-282
Cow position: chr25:32607355-32607172 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 92-294
Cow position: chr25:24077605-24077403 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 193

Conread position: 93-282
Cow position: chr25:8015330-8015519 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 93-287
Cow position: chr25:37468971-37469154 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 188, 72

Conread position: 94-282
Cow position: chr25:5568617-5568426 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 97-281
Cow position: chr25:19107624-19107799 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 140, 43

Conread position: 104-282
Cow position: chr25:27536020-27535835 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 139

Conread position: 104-285
Cow position: chr25:37446776-37446951 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 107-280
Cow position: chr25:18129372-18129546 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 135, 0

Conread position: 107-282
Cow position: chr25:22760065-22760239 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 107-282
Cow position: chr25:34767851-34768027 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 97, 87

Conread position: 113-282
Cow position: chr25:7802275-7802105 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 19

Conread position: 114-282
Cow position: chr25:24670186-24670017 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 78

Conread position: 117-282
Cow position: chr25:14554851-14555014 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 27

Conread position: 134-282
Cow position: chr25:12318625-12318477 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 140-278
Cow position: chr25:33979204-33979065 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 143-282
Cow position: chr25:4372512-4372367 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 146-282
Cow position: chr25:11662574-11662436 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 149-282
Cow position: chr25:13956176-13956043 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 150-282
Cow position: chr25:7296168-7296036 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 157-285
Cow position: chr25:11540339-11540472 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 165-290
Cow position: chr25:23895681-23895806 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 48

Show alignments to all cow chromosomes.