Cow genome map


           Conread name:
           Ss1.1-rcbl0_004480.5
        

               Conread position:
               2-380
               

               Cow position:
               chr3:68660930-68661299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               86-387
               

               Cow position:
               chr3:68649970-68650259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               201-383
               

               Cow position:
               chr3:68676454-68676637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               411-951
               

               Cow position:
               chr3:68676642-68677184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 31
               

               Conread position:
               412-1084
               

               Cow position:
               chr3:68729814-68730495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               688
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 289
               

               Conread position:
               413-637
               

               Cow position:
               chr3:68661305-68661523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               481-1012
               

               Cow position:
               chr3:68691374-68691924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 178
               
Show alignments to all cow chromosomes.