Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-120
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1-162
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 10

Conread position: 1-174
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 18

Conread position: 1-293
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-303
Cow position:
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 149

Conread position: 1-326
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 97, 19

Conread position: 1-348
Cow position:
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 111

Conread position: 1-355
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 372

Conread position: 1-362
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-374
Cow position:
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 233

Conread position: 1-391
Cow position:
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-394
Cow position:
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-396
Cow position:
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-396
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 377

Conread position: 1-402
Cow position:
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 34

Conread position: 1-402
Cow position:
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 1-404
Cow position:
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 234

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 48

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 321

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 257

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 371

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 272

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-412
Cow position:
Alignm length: 421
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 1-416
Cow position:
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 116

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 295

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 1-416
Cow position:
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 292

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 273

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 277

Conread position: 1-416
Cow position:
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-416
Cow position:
Alignm length: 438
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 237

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 319

Conread position: 1-416
Cow position:
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 150

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 45

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-417
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 134

Conread position: 1-417
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 161

Conread position: 1-417
Cow position:
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 150

Conread position: 1-444
Cow position:
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 1-444
Cow position:
Alignm length: 459
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 301

Conread position: 1-466
Cow position:
Alignm length: 485
Alignm identity: 314
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 10, 111

Conread position: 1-468
Cow position:
Alignm length: 481
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 245

Conread position: 1-468
Cow position:
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 231

Conread position: 2-231
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 124

Conread position: 2-290
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 116

Conread position: 2-371
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 2-405
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 107

Conread position: 2-405
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 127

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 3-382
Cow position:
Alignm length: 392
Alignm identity: 240
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 169

Conread position: 6-400
Cow position:
Alignm length: 407
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 65

Conread position: 11-444
Cow position:
Alignm length: 460
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 12-468
Cow position:
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 21-174
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 81

Conread position: 33-415
Cow position:
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 36-416
Cow position:
Alignm length: 401
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 140

Conread position: 41-335
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 59

Conread position: 42-455
Cow position:
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 57-405
Cow position:
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 69-359
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 55

Conread position: 82-376
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 90-381
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 233

Conread position: 91-388
Cow position:
Alignm length: 306
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 106

Conread position: 104-401
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 60, 32

Conread position: 109-405
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 112-290
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 112-290
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 118-344
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 130

Conread position: 118-415
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 43

Conread position: 148-468
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 172

Conread position: 152-413
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 112

Conread position: 157-405
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 140

Conread position: 167-383
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 141

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 203-468
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 211-403
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 180, 0

Conread position: 215-405
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 218-393
Cow position:
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 224-405
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 32, 43

Conread position: 235-432
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 241-416
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 36

Conread position: 269-401
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Show alignments to all cow chromosomes.