Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-151
Cow position: chr12:48404880-48405033 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-301
Cow position: chr12:26141648-26141962 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-308
Cow position: chr12:10483877-10484186 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 10

Conread position: 1-308
Cow position: chr12:21207529-21207849 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 189

Conread position: 1-312
Cow position: chr12:8982582-8982265 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 126

Conread position: 1-320
Cow position: chr12:347656-347994 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 131

Conread position: 1-366
Cow position: chr12:1137421-1137788 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 34

Conread position: 1-405
Cow position: chr12:1402325-1402742 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 328

Conread position: 1-405
Cow position: chr12:3360738-3361156 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position: chr12:20998285-20997881 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 136

Conread position: 1-405
Cow position: chr12:21254821-21254404 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position: chr12:21426528-21426946 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position: chr12:21941610-21942020 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 1-405
Cow position: chr12:32653379-32653796 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 1-405
Cow position: chr12:37558389-37558808 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-408
Cow position: chr12:2633-3054 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 405

Conread position: 1-415
Cow position: chr12:252221-251794 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 36

Conread position: 1-416
Cow position: chr12:6406811-6406388 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 90

Conread position: 1-416
Cow position: chr12:14662777-14662370 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 146

Conread position: 1-416
Cow position: chr12:21901781-21902202 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 49

Conread position: 1-416
Cow position: chr12:22332456-22332887 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 1-416
Cow position: chr12:26947146-26946727 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 1-416
Cow position: chr12:42859980-42859564 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 42

Conread position: 1-416
Cow position: chr12:45261449-45261886 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 131

Conread position: 1-436
Cow position: chr12:21499953-21500383 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 305
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 153

Conread position: 1-444
Cow position: chr12:27933111-27932649 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-444
Cow position: chr12:28766182-28765727 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-448
Cow position: chr12:2282381-2282839 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 138

Conread position: 1-468
Cow position: chr12:3632420-3631952 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 314
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 53, 114

Conread position: 1-468
Cow position: chr12:15951425-15950954 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 315
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 83, 11

Conread position: 2-389
Cow position: chr12:14693479-14693859 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 34

Conread position: 2-405
Cow position: chr12:22205912-22205496 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 234

Conread position: 2-405
Cow position: chr12:25101227-25100809 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 2-405
Cow position: chr12:43031548-43031133 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 256

Conread position: 2-416
Cow position: chr12:8311020-8311444 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 185

Conread position: 2-416
Cow position: chr12:8678287-8677858 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 2-416
Cow position: chr12:11098076-11098505 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 352

Conread position: 54-468
Cow position: chr12:18500941-18501342 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 284
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 95

Conread position: 107-401
Cow position: chr12:21197911-21198208 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 56, 41

Conread position: 113-447
Cow position: chr12:2838903-2838565 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 51, 205

Conread position: 123-306
Cow position: chr12:48405232-48405425 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 144

Conread position: 152-405
Cow position: chr12:33986156-33986414 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 208-403
Cow position: chr12:5861209-5861403 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 79

Conread position: 214-405
Cow position: chr12:23240065-23240255 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 49

Conread position: 295-416
Cow position: chr12:31544920-31545041 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.