Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-161
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 111

Conread position: 1-219
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 1-309
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 47

Conread position: 1-322
Cow position:
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-328
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-370
Cow position:
Alignm length: 384
Alignm identity: 250
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 30

Conread position: 1-384
Cow position:
Alignm length: 396
Alignm identity: 252
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 103

Conread position: 1-391
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 212

Conread position: 1-395
Cow position:
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 274

Conread position: 1-401
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 229

Conread position: 1-403
Cow position:
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 343

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 325

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 290

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 92

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 216

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 155

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 102

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 273

Conread position: 1-413
Cow position:
Alignm length: 425
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 406

Conread position: 1-414
Cow position:
Alignm length: 423
Alignm identity: 265
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 53

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 343

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 328

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 129

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 253

Conread position: 1-417
Cow position:
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 117

Conread position: 1-436
Cow position:
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 274

Conread position: 1-465
Cow position:
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 1-468
Cow position:
Alignm length: 478
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 2-362
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 242

Conread position: 2-404
Cow position:
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 52

Conread position: 2-405
Cow position:
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 116

Conread position: 2-416
Cow position:
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 2-468
Cow position:
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 136

Conread position: 3-162
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 3-405
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-417
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 9-224
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 92

Conread position: 12-416
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 18-405
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 283

Conread position: 25-421
Cow position:
Alignm length: 406
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 91

Conread position: 28-405
Cow position:
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 41-252
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 13

Conread position: 49-405
Cow position:
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 57-468
Cow position:
Alignm length: 434
Alignm identity: 283
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 76

Conread position: 58-451
Cow position:
Alignm length: 398
Alignm identity: 262
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 115

Conread position: 69-422
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 185

Conread position: 88-400
Cow position:
Alignm length: 324
Alignm identity: 209
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 110

Conread position: 90-330
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 188

Conread position: 92-278
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 153

Conread position: 92-387
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 15

Conread position: 98-340
Cow position:
Alignm length: 256
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 159

Conread position: 105-405
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 60

Conread position: 118-351
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 206

Conread position: 123-431
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 104

Conread position: 157-405
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 193-415
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 178, 57

Conread position: 194-396
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 197-332
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 202-405
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 204-405
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 232-405
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 249-405
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 282-436
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 0

Show alignments to all cow chromosomes.