Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-191
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 22

Conread position: 1-260
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 97, 32

Conread position: 1-336
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 49, 16

Conread position: 1-370
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-398
Cow position:
Alignm length: 420
Alignm identity: 278
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 279

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 128

Conread position: 1-403
Cow position:
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 127

Conread position: 1-403
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 357

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 423
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 278

Conread position: 1-405
Cow position:
Alignm length: 423
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 139

Conread position: 1-405
Cow position:
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 308

Conread position: 1-408
Cow position:
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 1-410
Cow position:
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 1-412
Cow position:
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-413
Cow position:
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 219

Conread position: 1-414
Cow position:
Alignm length: 424
Alignm identity: 277
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 138

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 323

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 190

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 1-416
Cow position:
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 38

Conread position: 1-416
Cow position:
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 198

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 357

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 412

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 271

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 126

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 349

Conread position: 1-416
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 113

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 233

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 169

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 101

Conread position: 1-416
Cow position:
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 135

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 34

Conread position: 1-417
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 279

Conread position: 1-417
Cow position:
Alignm length: 436
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 35

Conread position: 1-420
Cow position:
Alignm length: 436
Alignm identity: 285
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 35

Conread position: 1-430
Cow position:
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 148

Conread position: 1-435
Cow position:
Alignm length: 454
Alignm identity: 297
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 114

Conread position: 1-435
Cow position:
Alignm length: 450
Alignm identity: 293
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 35

Conread position: 1-444
Cow position:
Alignm length: 458
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 274

Conread position: 1-444
Cow position:
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 271

Conread position: 1-458
Cow position:
Alignm length: 475
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 1-467
Cow position:
Alignm length: 479
Alignm identity: 316
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 140

Conread position: 1-468
Cow position:
Alignm length: 476
Alignm identity: 308
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 139

Conread position: 1-468
Cow position:
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 109

Conread position: 1-468
Cow position:
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 2-189
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 2-444
Cow position:
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 2-466
Cow position:
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 32

Conread position: 3-304
Cow position:
Alignm length: 315
Alignm identity: 215
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 51, 81

Conread position: 3-390
Cow position:
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 3-425
Cow position:
Alignm length: 435
Alignm identity: 272
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 51

Conread position: 6-401
Cow position:
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 7-239
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 160, 45

Conread position: 9-431
Cow position:
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 10-389
Cow position:
Alignm length: 393
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 240

Conread position: 12-416
Cow position:
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 16

Conread position: 21-446
Cow position:
Alignm length: 433
Alignm identity: 276
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 175

Conread position: 35-438
Cow position:
Alignm length: 418
Alignm identity: 260
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 101

Conread position: 36-416
Cow position:
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 42-466
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 230

Conread position: 43-416
Cow position:
Alignm length: 386
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 160

Conread position: 57-414
Cow position:
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 270

Conread position: 57-450
Cow position:
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 403

Conread position: 61-396
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 72

Conread position: 66-291
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 33, 192

Conread position: 86-405
Cow position:
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 90-389
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 151

Conread position: 92-416
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 32

Conread position: 115-416
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 118-401
Cow position:
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 61

Conread position: 118-435
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 203

Conread position: 119-405
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 28

Conread position: 124-429
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 182

Conread position: 162-450
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 105

Conread position: 180-416
Cow position:
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 193-405
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 193-450
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 53

Conread position: 203-468
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 5

Conread position: 205-405
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 229-416
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 233-416
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 11

Conread position: 285-405
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.