Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-150
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 25

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-154
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 71

Conread position: 1-162
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-162
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-229
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 37

Conread position: 1-242
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 162, 61

Conread position: 1-242
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 38

Conread position: 1-259
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 142

Conread position: 1-269
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-275
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-278
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 48, 81

Conread position: 1-298
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-366
Cow position:
Alignm length: 389
Alignm identity: 271
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 53, 134

Conread position: 1-367
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 1-368
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 91

Conread position: 1-369
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 239

Conread position: 1-370
Cow position:
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 355

Conread position: 1-377
Cow position:
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 271

Conread position: 1-377
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 79

Conread position: 1-395
Cow position:
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 345

Conread position: 1-396
Cow position:
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 222

Conread position: 1-396
Cow position:
Alignm length: 410
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 236

Conread position: 1-396
Cow position:
Alignm length: 402
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 1-396
Cow position:
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 147

Conread position: 1-399
Cow position:
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 276

Conread position: 1-401
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 256

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 252

Conread position: 1-402
Cow position:
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-402
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 52

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 1-403
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 89

Conread position: 1-403
Cow position:
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 346

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 224

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 242

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-405
Cow position:
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 140

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 246

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 372

Conread position: 1-405
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 116

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 148

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 138

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-406
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-408
Cow position:
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 239

Conread position: 1-408
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 226

Conread position: 1-410
Cow position:
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 1-412
Cow position:
Alignm length: 424
Alignm identity: 275
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 46

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 224

Conread position: 1-415
Cow position:
Alignm length: 430
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 127

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-416
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 285

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 1-416
Cow position:
Alignm length: 436
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 97

Conread position: 1-416
Cow position:
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 192

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 89

Conread position: 1-416
Cow position:
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 248

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-416
Cow position:
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 168

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 326

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-416
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 177

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-417
Cow position:
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 190

Conread position: 1-429
Cow position:
Alignm length: 440
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 92

Conread position: 1-435
Cow position:
Alignm length: 448
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 58

Conread position: 1-437
Cow position:
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 271

Conread position: 1-444
Cow position:
Alignm length: 459
Alignm identity: 307
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 54

Conread position: 1-444
Cow position:
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 1-444
Cow position:
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 1-450
Cow position:
Alignm length: 464
Alignm identity: 308
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 30

Conread position: 1-450
Cow position:
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 1-465
Cow position:
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 1-468
Cow position:
Alignm length: 478
Alignm identity: 318
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 101

Conread position: 1-468
Cow position:
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 1-468
Cow position:
Alignm length: 480
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 1-468
Cow position:
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 1-468
Cow position:
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 19

Conread position: 2-405
Cow position:
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 2-405
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 327

Conread position: 2-405
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 135

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 321

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 215

Conread position: 2-416
Cow position:
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 2-468
Cow position:
Alignm length: 470
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 102

Conread position: 3-405
Cow position:
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 7-344
Cow position:
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 8-221
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 48

Conread position: 11-312
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 73

Conread position: 12-403
Cow position:
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 34

Conread position: 12-415
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 19-416
Cow position:
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 73

Conread position: 22-405
Cow position:
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 236

Conread position: 31-236
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 51

Conread position: 33-415
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 290

Conread position: 35-405
Cow position:
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 358

Conread position: 43-340
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 85

Conread position: 52-416
Cow position:
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 218

Conread position: 81-416
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 209

Conread position: 98-450
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 61, 34

Conread position: 99-468
Cow position:
Alignm length: 393
Alignm identity: 272
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 65, 117

Conread position: 103-416
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 220

Conread position: 112-405
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 112-468
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 39, 152

Conread position: 114-416
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 122-405
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 124-468
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 97

Conread position: 139-416
Cow position:
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 93

Conread position: 153-416
Cow position:
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 157-405
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 11

Conread position: 193-468
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 209, 82

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 215-453
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 192, 227

Conread position: 249-405
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 265-405
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 269-416
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.