Cow genome map
Conread name: | Ss1.1-rcbl0_010689.5 |
Conread position: | 1-174 |
Cow position: | chr18:27986957-27987138 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 54, 19 |
Conread position: | 1-216 |
Cow position: | chr18:44621688-44621917 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 53, 83 |
Conread position: | 1-221 |
Cow position: | chr18:17992633-17992402 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 53, 80 |
Conread position: | 1-286 |
Cow position: | chr18:16660075-16659791 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 226 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 53, 35 |
Conread position: | 1-310 |
Cow position: | chr18:18897432-18897746 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 212 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 99, 22 |
Conread position: | 1-392 |
Cow position: | chr18:16393712-16393312 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 262 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 53, 109 |
Conread position: | 1-396 |
Cow position: | chr18:44601467-44601856 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 254 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 52, 96 |
Conread position: | 1-402 |
Cow position: | chr18:51341615-51342030 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr18:16533908-16534325 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 116 |
Conread position: | 1-405 |
Cow position: | chr18:22602416-22602834 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr18:23944442-23944028 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr18:28973974-28973556 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-405 |
Cow position: | chr18:33358796-33359212 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 230 |
Conread position: | 1-405 |
Cow position: | chr18:33953638-33953228 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 30 |
Conread position: | 1-405 |
Cow position: | chr18:43146995-43146579 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr18:47741947-47742365 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-405 |
Cow position: | chr18:51480766-51481186 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-405 |
Cow position: | chr18:51689555-51689971 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 140 |
Conread position: | 1-408 |
Cow position: | chr18:2019757-2019337 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 395 |
Conread position: | 1-414 |
Cow position: | chr18:5980371-5980785 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 274 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 53, 98 |
Conread position: | 1-416 |
Cow position: | chr18:6869329-6868901 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 138 |
Conread position: | 1-416 |
Cow position: | chr18:14415905-14416333 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 355 |
Conread position: | 1-416 |
Cow position: | chr18:16176678-16176260 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 40 |
Conread position: | 1-416 |
Cow position: | chr18:23797578-23798005 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-416 |
Cow position: | chr18:32293704-32294116 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 27 |
Conread position: | 1-416 |
Cow position: | chr18:33268770-33269183 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 90 |
Conread position: | 1-416 |
Cow position: | chr18:36508262-36508690 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 189 |
Conread position: | 1-416 |
Cow position: | chr18:37504992-37505421 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 351 |
Conread position: | 1-416 |
Cow position: | chr18:39748507-39748935 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 327 |
Conread position: | 1-416 |
Cow position: | chr18:41840896-41840467 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-416 |
Cow position: | chr18:48221806-48222236 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 275 |
Conread position: | 1-416 |
Cow position: | chr18:51257912-51258341 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 26 |
Conread position: | 1-416 |
Cow position: | chr18:53785768-53786195 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 114 |
Conread position: | 1-417 |
Cow position: | chr18:16078628-16079078 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-417 |
Cow position: | chr18:19352315-19352745 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-417 |
Cow position: | chr18:51310511-51310942 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 136 |
Conread position: | 1-429 |
Cow position: | chr18:2887092-2886650 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 296 |
Conread position: | 1-435 |
Cow position: | chr18:40478312-40478761 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 130 |
Conread position: | 1-468 |
Cow position: | chr18:29236746-29237220 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 27 |
Conread position: | 1-468 |
Cow position: | chr18:37599598-37599131 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 133 |
Conread position: | 1-468 |
Cow position: | chr18:54171914-54171452 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 136 |
Conread position: | 2-308 |
Cow position: | chr18:43200992-43201304 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 27 |
Conread position: | 2-342 |
Cow position: | chr18:54024420-54024076 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 44 |
Conread position: | 2-402 |
Cow position: | chr18:35335419-35335823 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 88 |
Conread position: | 2-403 |
Cow position: | chr18:33335798-33336207 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 279 |
Conread position: | 2-405 |
Cow position: | chr18:27838373-27837970 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 58 |
Conread position: | 2-416 |
Cow position: | chr18:54044771-54044365 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 261 |
Conread position: | 2-434 |
Cow position: | chr18:16877411-16877843 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 295 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 52, 224 |
Conread position: | 3-405 |
Cow position: | chr18:55088994-55088578 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 3-417 |
Cow position: | chr18:1521062-1521504 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 112 |
Conread position: | 3-452 |
Cow position: | chr18:46878057-46877614 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 304 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 15, 79 |
Conread position: | 6-405 |
Cow position: | chr18:11275172-11274759 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 12-396 |
Cow position: | chr18:14130329-14130722 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 114 |
Conread position: | 31-416 |
Cow position: | chr18:47719624-47719226 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 35 |
Conread position: | 31-416 |
Cow position: | chr18:52650890-52651277 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 71 |
Conread position: | 53-380 |
Cow position: | chr18:114378-114711 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 218 |
Conread position: | 57-398 |
Cow position: | chr18:19407364-19407033 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 223 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 78-323 |
Cow position: | chr18:25350673-25350929 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 193 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 22, 248 |
Conread position: | 81-381 |
Cow position: | chr18:45958741-45959039 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 132 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 181, 0 |
Conread position: | 81-405 |
Cow position: | chr18:24040721-24040385 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 81-405 |
Cow position: | chr18:51463062-51462732 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 236 |
Conread position: | 87-416 |
Cow position: | chr18:19539560-19539227 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 270 |
Conread position: | 98-338 |
Cow position: | chr18:32652251-32652499 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 187 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 110-442 |
Cow position: | chr18:36211070-36210735 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 220 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 85, 24 |
Conread position: | 112-398 |
Cow position: | chr18:29048526-29048226 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 201 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 21, 81 |
Conread position: | 135-468 |
Cow position: | chr18:16843268-16842929 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 214 |
Conread position: | 161-348 |
Cow position: | chr18:18089375-18089183 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 162-402 |
Cow position: | chr18:54003616-54003864 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 33, 172 |
Conread position: | 194-405 |
Cow position: | chr18:27987196-27987410 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 164 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 169, 196 |
Conread position: | 206-416 |
Cow position: | chr18:17992273-17992063 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 165 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 49, 57 |
Conread position: | 227-468 |
Cow position: | chr18:29763539-29763775 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 170 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 199, 87 |
Conread position: | 250-467 |
Cow position: | chr18:56462711-56462498 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 76, 64 |
Conread position: | 260-444 |
Cow position: | chr18:51629648-51629822 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 136 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 20 |
Show alignments to all cow chromosomes.