Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-174
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 19

Conread position: 1-216
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 83

Conread position: 1-221
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 53, 80

Conread position: 1-286
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 35

Conread position: 1-310
Cow position:
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 22

Conread position: 1-392
Cow position:
Alignm length: 405
Alignm identity: 262
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 109

Conread position: 1-396
Cow position:
Alignm length: 402
Alignm identity: 254
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 96

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 230

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 140

Conread position: 1-408
Cow position:
Alignm length: 423
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 395

Conread position: 1-414
Cow position:
Alignm length: 422
Alignm identity: 274
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 98

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 355

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 40

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-416
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 90

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 189

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 351

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 327

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 433
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 275

Conread position: 1-416
Cow position:
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 1-416
Cow position:
Alignm length: 433
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 114

Conread position: 1-417
Cow position:
Alignm length: 451
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-417
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-417
Cow position:
Alignm length: 435
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 136

Conread position: 1-429
Cow position:
Alignm length: 444
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 296

Conread position: 1-435
Cow position:
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 1-468
Cow position:
Alignm length: 482
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 1-468
Cow position:
Alignm length: 475
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 1-468
Cow position:
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 136

Conread position: 2-308
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 2-342
Cow position:
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 44

Conread position: 2-402
Cow position:
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 88

Conread position: 2-403
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 279

Conread position: 2-405
Cow position:
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-416
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 261

Conread position: 2-434
Cow position:
Alignm length: 445
Alignm identity: 295
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 224

Conread position: 3-405
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-417
Cow position:
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 112

Conread position: 3-452
Cow position:
Alignm length: 464
Alignm identity: 304
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 79

Conread position: 6-405
Cow position:
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 12-396
Cow position:
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 31-416
Cow position:
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 35

Conread position: 31-416
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 71

Conread position: 53-380
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 218

Conread position: 57-398
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 68

Conread position: 78-323
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 22, 248

Conread position: 81-381
Cow position:
Alignm length: 301
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 181, 0

Conread position: 81-405
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 81-405
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 236

Conread position: 87-416
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 270

Conread position: 98-338
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 110-442
Cow position:
Alignm length: 339
Alignm identity: 220
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 85, 24

Conread position: 112-398
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 81

Conread position: 135-468
Cow position:
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 214

Conread position: 161-348
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 162-402
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 33, 172

Conread position: 194-405
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 169, 196

Conread position: 206-416
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 57

Conread position: 227-468
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 199, 87

Conread position: 250-467
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 64

Conread position: 260-444
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 20

Show alignments to all cow chromosomes.