Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-134
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 115

Conread position: 1-191
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 27

Conread position: 1-191
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 1-216
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 129

Conread position: 1-261
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 133

Conread position: 1-275
Cow position:
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 254

Conread position: 1-291
Cow position:
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 168

Conread position: 1-302
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 54, 223

Conread position: 1-318
Cow position:
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 292

Conread position: 1-339
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 115

Conread position: 1-355
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 100

Conread position: 1-369
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 1-372
Cow position:
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-396
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 331

Conread position: 1-396
Cow position:
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 219

Conread position: 1-396
Cow position:
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 292

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-402
Cow position:
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 257

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 236

Conread position: 1-405
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-405
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 245

Conread position: 1-405
Cow position:
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 152

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 327

Conread position: 1-408
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 1-416
Cow position:
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 49

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 138

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 300

Conread position: 1-416
Cow position:
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 279

Conread position: 1-417
Cow position:
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-435
Cow position:
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 222

Conread position: 1-435
Cow position:
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 1-437
Cow position:
Alignm length: 458
Alignm identity: 307
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 239

Conread position: 1-444
Cow position:
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 444

Conread position: 1-464
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 150

Conread position: 2-276
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 2-416
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 116

Conread position: 2-464
Cow position:
Alignm length: 471
Alignm identity: 311
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 192, 51

Conread position: 3-317
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 20

Conread position: 3-393
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 3-447
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 32

Conread position: 12-301
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 278

Conread position: 17-312
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 7

Conread position: 36-440
Cow position:
Alignm length: 420
Alignm identity: 264
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 35

Conread position: 37-374
Cow position:
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 253

Conread position: 42-340
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 49-431
Cow position:
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 19

Conread position: 64-405
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 244

Conread position: 82-401
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 27

Conread position: 82-405
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 92-299
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 174

Conread position: 99-389
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 104-405
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 80

Conread position: 119-446
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 34

Conread position: 123-423
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 134-468
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 34

Conread position: 163-468
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 89

Conread position: 188-383
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 50

Conread position: 217-416
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 46

Conread position: 226-416
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 228-405
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 35

Conread position: 229-415
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 248-416
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 250-468
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 172, 0

Conread position: 283-468
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 139, 90

Conread position: 293-405
Cow position:
Alignm length: 113
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.