Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-120
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 1-162
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-163
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-165
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-175
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 92

Conread position: 1-187
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 104, 53

Conread position: 1-191
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 53, 177

Conread position: 1-224
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 13

Conread position: 1-254
Cow position:
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 216

Conread position: 1-260
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 37

Conread position: 1-261
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 34

Conread position: 1-271
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 35

Conread position: 1-274
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 45

Conread position: 1-289
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 252

Conread position: 1-307
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 1-312
Cow position:
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 47

Conread position: 1-328
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 252

Conread position: 1-356
Cow position:
Alignm length: 368
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 218

Conread position: 1-372
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 41

Conread position: 1-383
Cow position:
Alignm length: 406
Alignm identity: 269
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 336

Conread position: 1-383
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 92

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 151

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-402
Cow position:
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 1-402
Cow position:
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 237

Conread position: 1-402
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-403
Cow position:
Alignm length: 416
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 1-403
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 131

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 326

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 236

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 327

Conread position: 1-405
Cow position:
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 125

Conread position: 1-405
Cow position:
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 289

Conread position: 1-405
Cow position:
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 113

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 357

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 272

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-408
Cow position:
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 1-408
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 1-408
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 107

Conread position: 1-408
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 1-410
Cow position:
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 1-412
Cow position:
Alignm length: 418
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 168

Conread position: 1-412
Cow position:
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 1-412
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-414
Cow position:
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 352

Conread position: 1-414
Cow position:
Alignm length: 451
Alignm identity: 316
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 205

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-416
Cow position:
Alignm length: 416
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 341

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 257

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 116

Conread position: 1-416
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 159

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 186

Conread position: 1-416
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 142

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 285

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 24

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 415

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 272

Conread position: 1-416
Cow position:
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 76

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 275

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 125

Conread position: 1-416
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 247

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-417
Cow position:
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 116

Conread position: 1-417
Cow position:
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 344

Conread position: 1-430
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 63

Conread position: 1-434
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 1-435
Cow position:
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 1-435
Cow position:
Alignm length: 456
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 347

Conread position: 1-444
Cow position:
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 203

Conread position: 1-444
Cow position:
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 136

Conread position: 1-444
Cow position:
Alignm length: 454
Alignm identity: 293
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 23

Conread position: 1-444
Cow position:
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 437

Conread position: 1-450
Cow position:
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 1-450
Cow position:
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 240

Conread position: 1-452
Cow position:
Alignm length: 462
Alignm identity: 287
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 125

Conread position: 1-453
Cow position:
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-458
Cow position:
Alignm length: 473
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 300

Conread position: 1-463
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 273

Conread position: 1-465
Cow position:
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 1-465
Cow position:
Alignm length: 475
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-468
Cow position:
Alignm length: 495
Alignm identity: 318
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 109

Conread position: 1-468
Cow position:
Alignm length: 496
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 2-391
Cow position:
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 2-396
Cow position:
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 2-405
Cow position:
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 155

Conread position: 2-415
Cow position:
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 284

Conread position: 2-416
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 264

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-450
Cow position:
Alignm length: 464
Alignm identity: 311
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 129

Conread position: 2-451
Cow position:
Alignm length: 460
Alignm identity: 292
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 102

Conread position: 2-467
Cow position:
Alignm length: 480
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 139

Conread position: 3-312
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 157

Conread position: 3-340
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 43

Conread position: 3-405
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-414
Cow position:
Alignm length: 423
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 97, 51

Conread position: 3-417
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 3-468
Cow position:
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 51

Conread position: 6-413
Cow position:
Alignm length: 419
Alignm identity: 268
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 58

Conread position: 7-332
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 95, 47

Conread position: 10-418
Cow position:
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 11-415
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 21-319
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 120

Conread position: 23-286
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 132

Conread position: 31-416
Cow position:
Alignm length: 400
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 325

Conread position: 36-466
Cow position:
Alignm length: 451
Alignm identity: 278
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 59

Conread position: 37-468
Cow position:
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 78

Conread position: 38-414
Cow position:
Alignm length: 393
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 149

Conread position: 40-468
Cow position:
Alignm length: 446
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 53-217
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 54-468
Cow position:
Alignm length: 440
Alignm identity: 296
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 141

Conread position: 66-405
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 84

Conread position: 85-378
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 16

Conread position: 90-301
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 90-416
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 98-441
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 127

Conread position: 99-443
Cow position:
Alignm length: 359
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 66, 25

Conread position: 113-301
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 115-468
Cow position:
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 127

Conread position: 118-404
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 120-278
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 22

Conread position: 123-412
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 174, 20

Conread position: 125-468
Cow position:
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 223

Conread position: 132-414
Cow position:
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 104

Conread position: 164-383
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 99

Conread position: 167-312
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 191-396
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 30

Conread position: 191-468
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 160

Conread position: 193-455
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 65

Conread position: 194-405
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 128

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 194-416
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 228-415
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 241-408
Cow position:
Alignm length: 168
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 257-415
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.