Cow genome map
Conread name: | Ss1.1-rcbl0_010689.5 |
Conread position: | 1-141 |
Cow position: | chr20:19192238-19192093 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-239 |
Cow position: | chr20:21393460-21393706 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 195 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 53, 27 |
Conread position: | 1-332 |
Cow position: | chr20:11679220-11678875 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 332 |
Conread position: | 1-383 |
Cow position: | chr20:28476208-28476579 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 249 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 58, 18 |
Conread position: | 1-392 |
Cow position: | chr20:13665311-13664921 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 269 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 54, 103 |
Conread position: | 1-398 |
Cow position: | chr20:15064659-15065066 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 122 |
Conread position: | 1-401 |
Cow position: | chr20:21914216-21914631 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 359 |
Conread position: | 1-402 |
Cow position: | chr20:7116579-7116164 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-402 |
Cow position: | chr20:13762792-13763209 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-405 |
Cow position: | chr20:822657-823075 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-405 |
Cow position: | chr20:3270600-3271012 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 1-405 |
Cow position: | chr20:8313546-8313132 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 190 |
Conread position: | 1-405 |
Cow position: | chr20:15097988-15097569 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-405 |
Cow position: | chr20:19437848-19438248 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 83 |
Conread position: | 1-405 |
Cow position: | chr20:28565706-28565288 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-408 |
Cow position: | chr20:23469769-23469355 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 291 |
Conread position: | 1-415 |
Cow position: | chr20:5560825-5560397 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-416 |
Cow position: | chr20:3252243-3251816 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 322 |
Conread position: | 1-416 |
Cow position: | chr20:5534829-5535256 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 244 |
Conread position: | 1-416 |
Cow position: | chr20:8004335-8003907 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 243 |
Conread position: | 1-416 |
Cow position: | chr20:12438871-12438442 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-416 |
Cow position: | chr20:15291908-15292329 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 42 |
Conread position: | 1-416 |
Cow position: | chr20:25851100-25850672 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 111 |
Conread position: | 1-416 |
Cow position: | chr20:27869087-27869516 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-416 |
Cow position: | chr20:28160672-28161089 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 27 |
Conread position: | 1-416 |
Cow position: | chr20:30684229-30684639 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 42 |
Conread position: | 1-416 |
Cow position: | chr20:35119464-35119888 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 28 |
Conread position: | 1-417 |
Cow position: | chr20:15947503-15947062 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 324 |
Conread position: | 1-435 |
Cow position: | chr20:22206438-22206875 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 133 |
Conread position: | 1-450 |
Cow position: | chr20:31378992-31378534 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 293 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 53, 273 |
Conread position: | 1-467 |
Cow position: | chr20:9954093-9953617 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 269 |
Conread position: | 2-191 |
Cow position: | chr20:10102659-10102470 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 7, 141 |
Conread position: | 2-467 |
Cow position: | chr20:18315694-18315242 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 168 |
Conread position: | 3-415 |
Cow position: | chr20:25960995-25961421 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 3-416 |
Cow position: | chr20:5484084-5484509 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 112 |
Conread position: | 3-416 |
Cow position: | chr20:23798774-23799204 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 379 |
Conread position: | 12-447 |
Cow position: | chr20:3032965-3033406 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 63 |
Conread position: | 15-443 |
Cow position: | chr20:13680153-13679704 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 103 |
Conread position: | 20-433 |
Cow position: | chr20:24614448-24614871 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 253 |
Conread position: | 53-396 |
Cow position: | chr20:29948444-29948798 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 69-417 |
Cow position: | chr20:3684524-3684168 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 157 |
Conread position: | 98-317 |
Cow position: | chr20:5233158-5232934 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 153 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 63, 127 |
Conread position: | 109-418 |
Cow position: | chr20:13434942-13434635 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 209 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 15, 44 |
Conread position: | 130-353 |
Cow position: | chr20:10841223-10840991 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 17, 156 |
Conread position: | 164-352 |
Cow position: | chr20:19367527-19367334 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 143 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 29, 130 |
Conread position: | 164-416 |
Cow position: | chr20:8993582-8993331 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 174 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 12, 150 |
Conread position: | 176-418 |
Cow position: | chr20:35104555-35104309 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 171 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 188-468 |
Cow position: | chr20:10856941-10856662 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 199 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 60, 31 |
Conread position: | 203-402 |
Cow position: | chr20:10846011-10845817 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 208-416 |
Cow position: | chr20:21393705-21393912 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 143 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 284-405 |
Cow position: | chr20:19495170-19495291 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.