Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-162
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-214
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-219
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 1-235
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-242
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 1-254
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 122

Conread position: 1-274
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 139

Conread position: 1-312
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 97, 52

Conread position: 1-338
Cow position:
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 271

Conread position: 1-356
Cow position:
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 344

Conread position: 1-367
Cow position:
Alignm length: 376
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 18

Conread position: 1-375
Cow position:
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 309

Conread position: 1-382
Cow position:
Alignm length: 388
Alignm identity: 253
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 53, 22

Conread position: 1-389
Cow position:
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 323

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 73

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 315

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-402
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 1-402
Cow position:
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 1-405
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 1-405
Cow position:
Alignm length: 421
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 137

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 273

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-406
Cow position:
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 28

Conread position: 1-410
Cow position:
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 1-415
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-416
Cow position:
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 320

Conread position: 1-416
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 157

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 398

Conread position: 1-416
Cow position:
Alignm length: 425
Alignm identity: 270
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 99

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 91

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-416
Cow position:
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 117

Conread position: 1-416
Cow position:
Alignm length: 430
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 169

Conread position: 1-430
Cow position:
Alignm length: 445
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 125

Conread position: 1-437
Cow position:
Alignm length: 451
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-443
Cow position:
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 69

Conread position: 1-444
Cow position:
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 235

Conread position: 1-468
Cow position:
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 39

Conread position: 1-468
Cow position:
Alignm length: 484
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 335

Conread position: 1-468
Cow position:
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 1-468
Cow position:
Alignm length: 483
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 189

Conread position: 2-416
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 2-416
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 255

Conread position: 2-416
Cow position:
Alignm length: 428
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 2-447
Cow position:
Alignm length: 463
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 230

Conread position: 3-416
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 218

Conread position: 31-356
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 23, 51

Conread position: 53-416
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 57-442
Cow position:
Alignm length: 395
Alignm identity: 256
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 81

Conread position: 65-416
Cow position:
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 81-390
Cow position:
Alignm length: 314
Alignm identity: 199
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 102

Conread position: 83-404
Cow position:
Alignm length: 336
Alignm identity: 221
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 28

Conread position: 92-403
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 112-440
Cow position:
Alignm length: 342
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 128

Conread position: 114-416
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 124-436
Cow position:
Alignm length: 325
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 15

Conread position: 161-405
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 0

Conread position: 193-405
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 33

Conread position: 193-416
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 216-468
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 208, 188

Conread position: 240-416
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 70

Conread position: 240-416
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 254-466
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 168, 174

Conread position: 271-405
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.