Cow genome map

Conread name: Ss1.1-rcbl0_010689.5

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 73

Conread position: 1-162
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 151

Conread position: 1-162
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 45

Conread position: 1-196
Cow position:
Alignm length: 203
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 100

Conread position: 1-236
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 34

Conread position: 1-276
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 153

Conread position: 1-312
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 11

Conread position: 1-401
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 63

Conread position: 1-402
Cow position:
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 325

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-405
Cow position:
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 262

Conread position: 1-405
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 1-405
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 76

Conread position: 1-405
Cow position:
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 360

Conread position: 1-405
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 296

Conread position: 1-410
Cow position:
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 1-416
Cow position:
Alignm length: 424
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 142

Conread position: 1-416
Cow position:
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-422
Cow position:
Alignm length: 439
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 2-393
Cow position:
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 112

Conread position: 2-405
Cow position:
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 256

Conread position: 2-405
Cow position:
Alignm length: 421
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 353

Conread position: 2-414
Cow position:
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 2-416
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 257

Conread position: 15-405
Cow position:
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 43-405
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 66-405
Cow position:
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 89-405
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 203

Conread position: 90-363
Cow position:
Alignm length: 287
Alignm identity: 191
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 176

Conread position: 110-416
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 112-374
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 112-405
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 25

Conread position: 118-391
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 37, 119

Conread position: 126-468
Cow position:
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 171

Conread position: 126-468
Cow position:
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 170

Conread position: 133-340
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.