Cow genome map
| Conread name: | Ss1.1-rcbl0_010689.5 |
| Conread position: | 1-152 |
| Cow position: | chr26:6850274-6850119 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 1-162 |
| Cow position: | chr26:9845712-9845548 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 151 |
| Conread position: | 1-162 |
| Cow position: | chr26:21350276-21350441 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 1-196 |
| Cow position: | chr26:11536932-11536732 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 1-236 |
| Cow position: | chr26:11301691-11301935 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 1-276 |
| Cow position: | chr26:20254970-20255242 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 153 |
| Conread position: | 1-312 |
| Cow position: | chr26:16904677-16904996 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 1-401 |
| Cow position: | chr26:15144860-15144447 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 1-402 |
| Cow position: | chr26:17397030-17396617 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 325 |
| Conread position: | 1-405 |
| Cow position: | chr26:2198527-2198943 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-405 |
| Cow position: | chr26:4605282-4604871 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 262 |
| Conread position: | 1-405 |
| Cow position: | chr26:5675069-5675476 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 1-405 |
| Cow position: | chr26:8869777-8870199 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 1-405 |
| Cow position: | chr26:12588665-12588248 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 360 |
| Conread position: | 1-405 |
| Cow position: | chr26:18854988-18855405 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 296 |
| Conread position: | 1-410 |
| Cow position: | chr26:3691706-3692112 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 116 |
| Conread position: | 1-416 |
| Cow position: | chr26:12574497-12574081 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 1-416 |
| Cow position: | chr26:19351613-19351186 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-422 |
| Cow position: | chr26:11254157-11253719 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-393 |
| Cow position: | chr26:20262761-20263155 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 2-405 |
| Cow position: | chr26:2352458-2352043 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 256 |
| Conread position: | 2-405 |
| Cow position: | chr26:30589473-30589055 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 353 |
| Conread position: | 2-414 |
| Cow position: | chr26:12656194-12656598 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 2-416 |
| Cow position: | chr26:9563458-9563030 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 257 |
| Conread position: | 15-405 |
| Cow position: | chr26:3030916-3030512 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 43-405 |
| Cow position: | chr26:30782686-30783060 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 66-405 |
| Cow position: | chr26:8918818-8919167 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 89-405 |
| Cow position: | chr26:18852212-18852536 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 203 |
| Conread position: | 90-363 |
| Cow position: | chr26:17997007-17996725 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 176 |
| Conread position: | 110-416 |
| Cow position: | chr26:6849422-6849109 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 112-374 |
| Cow position: | chr26:23603751-23603481 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 112-405 |
| Cow position: | chr26:9112753-9113055 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 112-430 |
| Cow position: | chr26:12666123-12666445 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 118-391 |
| Cow position: | chr26:9845555-9845275 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 126-468 |
| Cow position: | chr26:9849896-9849544 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 171 |
| Conread position: | 126-468 |
| Cow position: | chr26:9853406-9853055 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 170 |
| Conread position: | 133-340 |
| Cow position: | chr26:4334181-4334397 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.