Cow genome map
| Conread name: | Ss1.1-rcbl0_010689.5 |
| Conread position: | 1-374 |
| Cow position: | chr27:2364588-2364973 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 1-381 |
| Cow position: | chr27:23335000-23335409 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-401 |
| Cow position: | chr27:26324651-26325065 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 129 |
| Conread position: | 1-402 |
| Cow position: | chr27:16034556-16034143 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-405 |
| Cow position: | chr27:15541165-15541583 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-408 |
| Cow position: | chr27:1209188-1209608 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 271 |
| Conread position: | 1-416 |
| Cow position: | chr27:893046-893472 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 138 |
| Conread position: | 1-416 |
| Cow position: | chr27:5910703-5911128 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 1-416 |
| Cow position: | chr27:9993369-9992938 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-416 |
| Cow position: | chr27:14460620-14460191 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-416 |
| Cow position: | chr27:15278226-15277808 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 1-416 |
| Cow position: | chr27:25002694-25002270 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 1-443 |
| Cow position: | chr27:25805044-25804606 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 1-468 |
| Cow position: | chr27:26556145-26555687 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 2-289 |
| Cow position: | chr27:28890565-28890863 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 2-398 |
| Cow position: | chr27:26227132-26227535 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 84 |
| Conread position: | 2-416 |
| Cow position: | chr27:16439162-16439593 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 3-416 |
| Cow position: | chr27:27662740-27663160 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 323 |
| Conread position: | 13-397 |
| Cow position: | chr27:10010988-10010618 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 184 |
| Conread position: | 23-396 |
| Cow position: | chr27:22316443-22316828 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 6 |
| Conread position: | 36-416 |
| Cow position: | chr27:16432296-16432681 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 37-408 |
| Cow position: | chr27:27753324-27752939 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 66-416 |
| Cow position: | chr27:27051586-27051949 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 82-380 |
| Cow position: | chr27:26035133-26034827 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 183 |
| Conread position: | 90-303 |
| Cow position: | chr27:25160618-25160845 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 98-335 |
| Cow position: | chr27:27197431-27197194 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 147 |
| Conread position: | 98-384 |
| Cow position: | chr27:15638417-15638124 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 225 |
| Conread position: | 219-468 |
| Cow position: | chr27:8561609-8561861 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 236-405 |
| Cow position: | chr27:28078533-28078701 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 57 |
Show alignments to all cow chromosomes.